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The map label for this gene is ycgN [C]

Identifier: 117920822

GI number: 117920822

Start: 2859881

End: 2860339

Strand: Reverse

Name: ycgN [C]

Synonym: Shewana3_2379

Alternate gene names: 117920822

Gene position: 2860339-2859881 (Counterclockwise)

Preceding gene: 117920823

Following gene: 117920818

Centisome position: 57.53

GC content: 48.37

Gene sequence:

>459_bases
ATGAAGATAAGCGTAAACATGGCATTTTGGCAGAATAAAGCGTTAACCGAGTTGACGTCGCAGGAGTGGGAGTCCCTCTG
CGATGGTTGTGGTAAGTGTTGTTTAAACAAGTTGATCGATGATGAAACCGAAGAGCTGTATTACACCAATGCGGCTTGCC
TACTGCTCGATCATCAAAGTGCCAGCTGTAAGCATTATAGTGACCGTTTCAGCCATGTTCCCCAATGTACTGTGATCACT
CCGCAAAACGTCCATGAACTGACGTGGTTACCCGATAGCTGCGCCTATCGTCGTTTAGCCGCTGGTCGAGACTTGCCAAG
CTGGCATCTATTACTCACGGGCTCTAAAGAGGCCATGCACCTTGCGGGTATGTCGATTCAAGGCAAGGTGGTGGATGAGC
GCAGGGTGAAAGATATTGAAGATCATATCGTGCTGTGGCCGCTGAAAGATCTAGATTAA

Upstream 100 bases:

>100_bases
AGGGCGATTATTTTGGCATCTCTGTGGTGCATTTATCGGAGAGAATTAAGACTCCCCAGTAAATTGGTGTAAAATGGCCC
GCATTAAGCGGGTTTTTTAT

Downstream 100 bases:

>100_bases
CGCTATTACAGCAGCTTTTGTCTCTAATAACTGACGTTAATAAACAATCAGATGTGAATAAACAAAAAGGAGCAACTAAC
CATTGGGTTGATTGCTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKISVNMAFWQNKALTELTSQEWESLCDGCGKCCLNKLIDDETEELYYTNAACLLLDHQSASCKHYSDRFSHVPQCTVIT
PQNVHELTWLPDSCAYRRLAAGRDLPSWHLLLTGSKEAMHLAGMSIQGKVVDERRVKDIEDHIVLWPLKDLD

Sequences:

>Translated_152_residues
MKISVNMAFWQNKALTELTSQEWESLCDGCGKCCLNKLIDDETEELYYTNAACLLLDHQSASCKHYSDRFSHVPQCTVIT
PQNVHELTWLPDSCAYRRLAAGRDLPSWHLLLTGSKEAMHLAGMSIQGKVVDERRVKDIEDHIVLWPLKDLD
>Mature_152_residues
MKISVNMAFWQNKALTELTSQEWESLCDGCGKCCLNKLIDDETEELYYTNAACLLLDHQSASCKHYSDRFSHVPQCTVIT
PQNVHELTWLPDSCAYRRLAAGRDLPSWHLLLTGSKEAMHLAGMSIQGKVVDERRVKDIEDHIVLWPLKDLD

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=142, Percent_Identity=50, Blast_Score=157, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 17349; Mature: 17349

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISVNMAFWQNKALTELTSQEWESLCDGCGKCCLNKLIDDETEELYYTNAACLLLDHQS
CEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCEEEEEEECCC
ASCKHYSDRFSHVPQCTVITPQNVHELTWLPDSCAYRRLAAGRDLPSWHLLLTGSKEAMH
CCCCHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCEE
LAGMSIQGKVVDERRVKDIEDHIVLWPLKDLD
EECCCEECEECCHHHHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MKISVNMAFWQNKALTELTSQEWESLCDGCGKCCLNKLIDDETEELYYTNAACLLLDHQS
CEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCEEEEEEECCC
ASCKHYSDRFSHVPQCTVITPQNVHELTWLPDSCAYRRLAAGRDLPSWHLLLTGSKEAMH
CCCCHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCEE
LAGMSIQGKVVDERRVKDIEDHIVLWPLKDLD
EECCCEECEECCHHHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]