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The map label for this gene is ykgN [H]

Identifier: 117920802

GI number: 117920802

Start: 2837756

End: 2838001

Strand: Direct

Name: ykgN [H]

Synonym: Shewana3_2359

Alternate gene names: 117920802

Gene position: 2837756-2838001 (Clockwise)

Preceding gene: 117920801

Following gene: 117920803

Centisome position: 57.07

GC content: 44.31

Gene sequence:

>246_bases
GTGTCTAGGAACCACAAACATTATTCCGAAGAATTTAAAATCGAAGCTGTTAAGCAAGTTACCATTGCTGGCCATTCTGT
TGCTGATGTTGCTCAGCGTTTAGGAACAACCACCCACAGTCTTTATGCCTGGATTAAACGCTACGGCCCCGATTCATCAG
AACATTTGCAAAAGTCTGAAGAGTCAGCCGAGATTCGACTGCTACAGAAAGAGCTCAAGCGTGTCACTGAAGAACGTGAC
TTGTAA

Upstream 100 bases:

>100_bases
AGATGATGTCGATACAAACTAGTCGTTAGATAAAATATGAATCGCCACCGATTTCCTAGACACCTCTTTTGGGTTAGTTA
GATAAACTAACCCAAAAGAG

Downstream 100 bases:

>100_bases
AAAAAAGCCGCGGCGTACTTCGCAAGCCACCCCGAGTAAGATACGCCTTTATTCAAGAGCATCACCACAGCCATTCAGTG
CGACAACTTTGTCAGCTGTT

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSRNHKHYSEEFKIEAVKQVTIAGHSVADVAQRLGTTTHSLYAWIKRYGPDSSEHLQKSEESAEIRLLQKELKRVTEERD
L

Sequences:

>Translated_81_residues
MSRNHKHYSEEFKIEAVKQVTIAGHSVADVAQRLGTTTHSLYAWIKRYGPDSSEHLQKSEESAEIRLLQKELKRVTEERD
L
>Mature_80_residues
SRNHKHYSEEFKIEAVKQVTIAGHSVADVAQRLGTTTHSLYAWIKRYGPDSSEHLQKSEESAEIRLLQKELKRVTEERDL

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 9393; Mature: 9261

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNHKHYSEEFKIEAVKQVTIAGHSVADVAQRLGTTTHSLYAWIKRYGPDSSEHLQKSE
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
ESAEIRLLQKELKRVTEERDL
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRNHKHYSEEFKIEAVKQVTIAGHSVADVAQRLGTTTHSLYAWIKRYGPDSSEHLQKSE
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
ESAEIRLLQKELKRVTEERDL
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8113168; 9278503 [H]