| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920796
Identifier: 117920796
GI number: 117920796
Start: 2829650
End: 2831923
Strand: Direct
Name: 117920796
Synonym: Shewana3_2353
Alternate gene names: NA
Gene position: 2829650-2831923 (Clockwise)
Preceding gene: 117920795
Following gene: 117920797
Centisome position: 56.91
GC content: 43.18
Gene sequence:
>2274_bases ATGACTCCTCCTGTACGCAACACCAGCAAAAAATTAAAGGAATTTTTAAGCAAATATTTTGCACCAGAGCATTTGAATCC AGAGCTCAAGCAAACGCTGTTAATGCAACTAGCCTATAGTATTCAAGCATTTCCAGCAGGCTATTGGGAGCAATTCGAAC TAATAGATAGGCTAGTAAAAATTCTGATAACAAAAATGCCTTCAGGCTCTGTCAGTAACACTGAAATATTTGGAATTTTA AAGAAAAATAAGCATCTTACATCATACCCATTTGCTGCCACCATTTGTGCAGTGTTACCCCCAAATGCCACACCACAATG GAGAACGAAATACACGGCATACCAATCGATTGTTCTTATCTGTTGTTTCATACGCTATACCCATGACCAGCAACTCGCAA CCTCAGGAAATGAAAATGCATTACGCGAGCTACGTCTGGTAGCGATGGACCCCAAGCATCGAAAACTATTAGATATACTG CCAGAATTGGATGACGCATCATCAGTTGAACGACTGGTGTCAAAACTTAAAGAACTACGAAAGGAAAAATATCCTGCCCC GCAAGAGTACGGCCTTGGCTACTTGGAGTTAGTGCTTAGAGAAGCTGTATCAGGGAGCAAAAGACGACGAAGAAGAATTA GAATACCTCCTATTTCAGACCCTGACACCTTCATCGAACTTAATCCCGTTGATGCATTTGAAGACGCAGGCCTTGAGGTT AAAGAACTATGTGTCGCATTCACAAAACCGACGACGGCTCAAGAACGAGATGAGGCTATATCGGTAACAGCTGGTCGAAC ATTTCGTATTGAAGATAAACCCTTAACGAATAAACTAAAAACACCCCCTCCCCCATCCTCAAGAGCGGTACGGGCTATAC AGCATAAGTGTCTGACTGAAAAACTCGGCATTATGCAGTTATCCTTAAATTGCAGTTACAATCAACTGACCGAATGGGAT ATATGTCAACTCATTCGTTTTACGACCAATGGAATTAAAACTGGAGTAAACCCAGATAGCTGCTCAACCCTACTGCTGTG CCTGCTATGCGGTCGAGATCCTATTTCACTAGGACAATCTTCAAATACATTTTGTCTCACACATTACAAAAATCGCCCTT GCATATCTCTAACCCACACAGTACCAGCAAGCAAACAAGATGTAAGACTAGAAAAATGTTTGAACAATATAACAAACCAT TTAGTGCTGCCGCTCCCTCAATTTTTACAAGATAAGCTTACTCAAAACGTGGGCACTGCAGACTTGAAGTCCGTCATTAA TGACATCAACAAGCAGCACCGATGTCGTTTAAGTCTCGGAAGAATCACCCGTTTTCTTGAACACTGGTATATCAATAATG GACTAGATCGTGCCGAAGTCGGACTCATAAAAGGGCGAGCCCCCCGAAACCAGCCAGCACTGAGCTATTCAAATTTCGAT GCAGATAAACTGATTGAAAACCACCACAGATACGTGAGTTCAATCTTCGAGATGGCTAAGATCGATTCGCAACTCCCCGA AGTAAAGCCCATCAAAAAGCAACTGGGAAGTGCATTACATCTCCCTCCACGGACTTTACACAATTTTTTTCGCGTTTTGA GGAGTCAAATTCCTCGCCCGCGAAAGCAATCTTTGGAAGAACTCACGACACTACATAATCACTATGTCTGCTACGTATGG GCGCTTTTGACGTTTGCAACCGGTCACCGCGATGTTAATGCACCAATGGGACAGCGTACCGATTTCAACAGCCATAACAA TACCTGGTGGATTAGCGATAAAGAAAACCGACATGGGATATCTGCTAGAACGCTGATACTTCCACAGACTGCAGTGAAGC AACTTGAACATTATCTACAACATCTTCAAGAGTTGAAAAAACGCAGTCAACTCATCGCAAAAGATATTTTCAAACGTGCA GACGAGGCAATGACAGGCAGCGGAAATCTTCTATTTTTTATAAAACATCAAGAACAGGACAACATCCCCCAAATTACGCA AGAACTCACGCCTGCCAGAGTAAAAGCATTTCTTGGAGACCAGTTACCCTGGCCTGGCAACTGGGGGAGGCATCACATGC GTAGCGAATTAAAGCGTCTCGGTGTTGTTCCGGCAGAGATAGATGGTTGGATGGGACACGAAGATATTGGAGAAGAATCA ATGGGTCGTCATAGCATGCTATCAACTCAATACCTCAACCGTATTGCTCAGCATATCGAAACGCTACTGAACACTCATGA AATTACGGTGGTTGATGCATGGAAAACCCGCTGA
Upstream 100 bases:
>100_bases GCACTCTGGTTCAGCAGCGGCAGCGCCAGTTTCCTAAATGCCCAATATCTGATTCTGTCGATATTCTCGCCGAATTAGCA ATGCCATGGGAGCCCAAATA
Downstream 100 bases:
>100_bases TCCTTCCACATGAACAGAAATCCCTAGTACGGTTATTGGGGCATCAGTCCAGAACGGCTGCTCGGCAAAAAAGTCATATA ACGATAATAAAACAAGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 757; Mature: 756
Protein sequence:
>757_residues MTPPVRNTSKKLKEFLSKYFAPEHLNPELKQTLLMQLAYSIQAFPAGYWEQFELIDRLVKILITKMPSGSVSNTEIFGIL KKNKHLTSYPFAATICAVLPPNATPQWRTKYTAYQSIVLICCFIRYTHDQQLATSGNENALRELRLVAMDPKHRKLLDIL PELDDASSVERLVSKLKELRKEKYPAPQEYGLGYLELVLREAVSGSKRRRRRIRIPPISDPDTFIELNPVDAFEDAGLEV KELCVAFTKPTTAQERDEAISVTAGRTFRIEDKPLTNKLKTPPPPSSRAVRAIQHKCLTEKLGIMQLSLNCSYNQLTEWD ICQLIRFTTNGIKTGVNPDSCSTLLLCLLCGRDPISLGQSSNTFCLTHYKNRPCISLTHTVPASKQDVRLEKCLNNITNH LVLPLPQFLQDKLTQNVGTADLKSVINDINKQHRCRLSLGRITRFLEHWYINNGLDRAEVGLIKGRAPRNQPALSYSNFD ADKLIENHHRYVSSIFEMAKIDSQLPEVKPIKKQLGSALHLPPRTLHNFFRVLRSQIPRPRKQSLEELTTLHNHYVCYVW ALLTFATGHRDVNAPMGQRTDFNSHNNTWWISDKENRHGISARTLILPQTAVKQLEHYLQHLQELKKRSQLIAKDIFKRA DEAMTGSGNLLFFIKHQEQDNIPQITQELTPARVKAFLGDQLPWPGNWGRHHMRSELKRLGVVPAEIDGWMGHEDIGEES MGRHSMLSTQYLNRIAQHIETLLNTHEITVVDAWKTR
Sequences:
>Translated_757_residues MTPPVRNTSKKLKEFLSKYFAPEHLNPELKQTLLMQLAYSIQAFPAGYWEQFELIDRLVKILITKMPSGSVSNTEIFGIL KKNKHLTSYPFAATICAVLPPNATPQWRTKYTAYQSIVLICCFIRYTHDQQLATSGNENALRELRLVAMDPKHRKLLDIL PELDDASSVERLVSKLKELRKEKYPAPQEYGLGYLELVLREAVSGSKRRRRRIRIPPISDPDTFIELNPVDAFEDAGLEV KELCVAFTKPTTAQERDEAISVTAGRTFRIEDKPLTNKLKTPPPPSSRAVRAIQHKCLTEKLGIMQLSLNCSYNQLTEWD ICQLIRFTTNGIKTGVNPDSCSTLLLCLLCGRDPISLGQSSNTFCLTHYKNRPCISLTHTVPASKQDVRLEKCLNNITNH LVLPLPQFLQDKLTQNVGTADLKSVINDINKQHRCRLSLGRITRFLEHWYINNGLDRAEVGLIKGRAPRNQPALSYSNFD ADKLIENHHRYVSSIFEMAKIDSQLPEVKPIKKQLGSALHLPPRTLHNFFRVLRSQIPRPRKQSLEELTTLHNHYVCYVW ALLTFATGHRDVNAPMGQRTDFNSHNNTWWISDKENRHGISARTLILPQTAVKQLEHYLQHLQELKKRSQLIAKDIFKRA DEAMTGSGNLLFFIKHQEQDNIPQITQELTPARVKAFLGDQLPWPGNWGRHHMRSELKRLGVVPAEIDGWMGHEDIGEES MGRHSMLSTQYLNRIAQHIETLLNTHEITVVDAWKTR >Mature_756_residues TPPVRNTSKKLKEFLSKYFAPEHLNPELKQTLLMQLAYSIQAFPAGYWEQFELIDRLVKILITKMPSGSVSNTEIFGILK KNKHLTSYPFAATICAVLPPNATPQWRTKYTAYQSIVLICCFIRYTHDQQLATSGNENALRELRLVAMDPKHRKLLDILP ELDDASSVERLVSKLKELRKEKYPAPQEYGLGYLELVLREAVSGSKRRRRRIRIPPISDPDTFIELNPVDAFEDAGLEVK ELCVAFTKPTTAQERDEAISVTAGRTFRIEDKPLTNKLKTPPPPSSRAVRAIQHKCLTEKLGIMQLSLNCSYNQLTEWDI CQLIRFTTNGIKTGVNPDSCSTLLLCLLCGRDPISLGQSSNTFCLTHYKNRPCISLTHTVPASKQDVRLEKCLNNITNHL VLPLPQFLQDKLTQNVGTADLKSVINDINKQHRCRLSLGRITRFLEHWYINNGLDRAEVGLIKGRAPRNQPALSYSNFDA DKLIENHHRYVSSIFEMAKIDSQLPEVKPIKKQLGSALHLPPRTLHNFFRVLRSQIPRPRKQSLEELTTLHNHYVCYVWA LLTFATGHRDVNAPMGQRTDFNSHNNTWWISDKENRHGISARTLILPQTAVKQLEHYLQHLQELKKRSQLIAKDIFKRAD EAMTGSGNLLFFIKHQEQDNIPQITQELTPARVKAFLGDQLPWPGNWGRHHMRSELKRLGVVPAEIDGWMGHEDIGEESM GRHSMLSTQYLNRIAQHIETLLNTHEITVVDAWKTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86623; Mature: 86492
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPVRNTSKKLKEFLSKYFAPEHLNPELKQTLLMQLAYSIQAFPAGYWEQFELIDRLVK CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ILITKMPSGSVSNTEIFGILKKNKHLTSYPFAATICAVLPPNATPQWRTKYTAYQSIVLI HHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH CCFIRYTHDQQLATSGNENALRELRLVAMDPKHRKLLDILPELDDASSVERLVSKLKELR HHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH KEKYPAPQEYGLGYLELVLREAVSGSKRRRRRIRIPPISDPDTFIELNPVDAFEDAGLEV HHCCCCCHHHCCHHHHHHHHHHHCCCHHHCCEECCCCCCCCCCEEEECCCCCHHHCCCCH KELCVAFTKPTTAQERDEAISVTAGRTFRIEDKPLTNKLKTPPPPSSRAVRAIQHKCLTE HHHHHHHCCCCCCHHHCCEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH KLGIMQLSLNCSYNQLTEWDICQLIRFTTNGIKTGVNPDSCSTLLLCLLCGRDPISLGQS HHCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC SNTFCLTHYKNRPCISLTHTVPASKQDVRLEKCLNNITNHLVLPLPQFLQDKLTQNVGTA CCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCHH DLKSVINDINKQHRCRLSLGRITRFLEHWYINNGLDRAEVGLIKGRAPRNQPALSYSNFD HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCCCCCCCCCCC ADKLIENHHRYVSSIFEMAKIDSQLPEVKPIKKQLGSALHLPPRTLHNFFRVLRSQIPRP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC RKQSLEELTTLHNHYVCYVWALLTFATGHRDVNAPMGQRTDFNSHNNTWWISDKENRHGI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC SARTLILPQTAVKQLEHYLQHLQELKKRSQLIAKDIFKRADEAMTGSGNLLFFIKHQEQD CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC NIPQITQELTPARVKAFLGDQLPWPGNWGRHHMRSELKRLGVVPAEIDGWMGHEDIGEES CHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCHHCCHHH MGRHSMLSTQYLNRIAQHIETLLNTHEITVVDAWKTR CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC >Mature Secondary Structure TPPVRNTSKKLKEFLSKYFAPEHLNPELKQTLLMQLAYSIQAFPAGYWEQFELIDRLVK CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ILITKMPSGSVSNTEIFGILKKNKHLTSYPFAATICAVLPPNATPQWRTKYTAYQSIVLI HHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH CCFIRYTHDQQLATSGNENALRELRLVAMDPKHRKLLDILPELDDASSVERLVSKLKELR HHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH KEKYPAPQEYGLGYLELVLREAVSGSKRRRRRIRIPPISDPDTFIELNPVDAFEDAGLEV HHCCCCCHHHCCHHHHHHHHHHHCCCHHHCCEECCCCCCCCCCEEEECCCCCHHHCCCCH KELCVAFTKPTTAQERDEAISVTAGRTFRIEDKPLTNKLKTPPPPSSRAVRAIQHKCLTE HHHHHHHCCCCCCHHHCCEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH KLGIMQLSLNCSYNQLTEWDICQLIRFTTNGIKTGVNPDSCSTLLLCLLCGRDPISLGQS HHCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC SNTFCLTHYKNRPCISLTHTVPASKQDVRLEKCLNNITNHLVLPLPQFLQDKLTQNVGTA CCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCHH DLKSVINDINKQHRCRLSLGRITRFLEHWYINNGLDRAEVGLIKGRAPRNQPALSYSNFD HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCCCCCCCCCCC ADKLIENHHRYVSSIFEMAKIDSQLPEVKPIKKQLGSALHLPPRTLHNFFRVLRSQIPRP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC RKQSLEELTTLHNHYVCYVWALLTFATGHRDVNAPMGQRTDFNSHNNTWWISDKENRHGI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC SARTLILPQTAVKQLEHYLQHLQELKKRSQLIAKDIFKRADEAMTGSGNLLFFIKHQEQD CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC NIPQITQELTPARVKAFLGDQLPWPGNWGRHHMRSELKRLGVVPAEIDGWMGHEDIGEES CHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCHHCCHHH MGRHSMLSTQYLNRIAQHIETLLNTHEITVVDAWKTR CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA