| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920793
Identifier: 117920793
GI number: 117920793
Start: 2827860
End: 2828102
Strand: Reverse
Name: 117920793
Synonym: Shewana3_2350
Alternate gene names: NA
Gene position: 2828102-2827860 (Counterclockwise)
Preceding gene: 117920794
Following gene: 117920792
Centisome position: 56.88
GC content: 44.86
Gene sequence:
>243_bases ATGGAAATTAAAATTCTCGGTACGGGTTGCAGCAAGTGTCAAAAATTGGCAGAGGCTACTAATGCTGCTGCGCAGGCACT TAATCTTGATTACCAGCTAACTAAAGTGACTGATATTGAAAAAATTATGGCCTACAACGTGATGTCGACACCGGCGTTGG TGGTCGACGAGCAAATAAAGCTGACAGGACGGCTTGCCAGTGTCGATGAGATCATGACCTTGCTTAAATCCCATACGGCT TAA
Upstream 100 bases:
>100_bases AGATCTACAAATTCAGAAGCAGATCGCATTAATTGAGTAGTTTCAGACCTATCATTTGGTTAAATGGCAAAATAACAAAG TAACCAAATAAGGATCAATC
Downstream 100 bases:
>100_bases TGGCATAAAGGAGTCGGCATGAACGCTAAAAAAATTGTCCGCTACCTGCTGCTCACTGTGGTTTGTGTAGGCTTAGGGTT GGTTGGGTATCAGCAATTTG
Product: redox-active disulfide protein 2
Products: NA
Alternate protein names: Redox-Active Disulfide Protein; Thioredoxin Family Protein; Thiol-Disulfide Isomerase And Thioredoxin
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MEIKILGTGCSKCQKLAEATNAAAQALNLDYQLTKVTDIEKIMAYNVMSTPALVVDEQIKLTGRLASVDEIMTLLKSHTA
Sequences:
>Translated_80_residues MEIKILGTGCSKCQKLAEATNAAAQALNLDYQLTKVTDIEKIMAYNVMSTPALVVDEQIKLTGRLASVDEIMTLLKSHTA >Mature_80_residues MEIKILGTGCSKCQKLAEATNAAAQALNLDYQLTKVTDIEKIMAYNVMSTPALVVDEQIKLTGRLASVDEIMTLLKSHTA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8669; Mature: 8669
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKILGTGCSKCQKLAEATNAAAQALNLDYQLTKVTDIEKIMAYNVMSTPALVVDEQIK CEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCEEEECCHHH LTGRLASVDEIMTLLKSHTA HHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MEIKILGTGCSKCQKLAEATNAAAQALNLDYQLTKVTDIEKIMAYNVMSTPALVVDEQIK CEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCEEEECCHHH LTGRLASVDEIMTLLKSHTA HHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA