| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920742
Identifier: 117920742
GI number: 117920742
Start: 2762417
End: 2763352
Strand: Reverse
Name: 117920742
Synonym: Shewana3_2299
Alternate gene names: NA
Gene position: 2763352-2762417 (Counterclockwise)
Preceding gene: 117920743
Following gene: 117920739
Centisome position: 55.58
GC content: 51.28
Gene sequence:
>936_bases ATGGCGAATGTGAGTTTTTACCCAATCGGGACTGTCGGTGAAAAATGGGGCGATGCCGAAAAGGCCGCATGGTTTGCTAA CACGCAAATTAAGCGTTCATACCAAGATAATGTAGTCACGCCACTAAAGGCGATGGAGTCACAACTGGCCGAAATAGGGC TGAGTGTGGTGCAATATGGCGCCTTATCGATTGATTCTGCACGTTATCCCTTGTTTGCGGTTAGAACTGCTACGTTCGAT CCGAACAAGAAAACCGTCTTAGTCACAGGTGGCGTACACGGCTACGAAACCAGTGGCGTGCATGGCGCCTTGGCTTTTTT GGCTAACAACGCGGCTCTCTATGCTGAGCGCGTAAACTTAGTGGTGGCAGTGTGTGTGAGCCCTTGGGGTTATGAGACCA TTAATCGCTGGAACCCGAAAGCTATCGATCCAAACCGCTCGTTTTATGCCAATAGCCCAGCTGAAGAGTCGGCAGCACTG ATGGCACTGGTGGCAAGTGTCCCACAAGGTTTTGATGTGCATGTGGATTTACATGAAACCACCGATTCGGATGAGGATGA ATTTCGTCCAGCCTTGGCCGCGCGTGATGGTAAAGACTTTATTCCCGGCACGATTCCAGATGGATTTTACGCCGTAGGCG ATACCGAAAATCCGCAGGATGCTTTCCAAAAGGCGATTATCGACGGGGTAAGCAAAGTCACCCACATCGCGCCCGCCGAT GAAAAGGGCGAGATTATCGGCTCGACAGTGGTGCAACACGGGGTGATCAACTACCCGTTGAAAGCGCTAGGTTTATGCAG CAGTGTGACGGGCTGTATTTATAACACCACCACCGAAGTCTATCCCGACAGTCCATCGGCCACGCCCGCAGAGTGCAATC TAGCCCAAGTTGCCGCAATCACCAGTGCCATAGACTATGTGTTAGCGTTGAACTAA
Upstream 100 bases:
>100_bases GAGCGCGGTGGGATCCGTGATATTCCAATGCAACTCGTGCTTTGATCTATAACGATCTTTAACCATAAGACCAAAACATA AAATCAGAAGAAGAGAACCT
Downstream 100 bases:
>100_bases TTGAGTTTGTTTGATACTTGGCTTGAACAATTGTAACGCTAGCATGGCGTGAACAATTGATTTTTCTTAAGTTTCATGTC TCGTCCTGAAATAAGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Zn-Dependent Deacylase/Carboxypeptidase Superfamily; Deacylase; Deacylase/Carboxypeptidase Superfamily Protein; Fusion Protein; Peptidase
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MANVSFYPIGTVGEKWGDAEKAAWFANTQIKRSYQDNVVTPLKAMESQLAEIGLSVVQYGALSIDSARYPLFAVRTATFD PNKKTVLVTGGVHGYETSGVHGALAFLANNAALYAERVNLVVAVCVSPWGYETINRWNPKAIDPNRSFYANSPAEESAAL MALVASVPQGFDVHVDLHETTDSDEDEFRPALAARDGKDFIPGTIPDGFYAVGDTENPQDAFQKAIIDGVSKVTHIAPAD EKGEIIGSTVVQHGVINYPLKALGLCSSVTGCIYNTTTEVYPDSPSATPAECNLAQVAAITSAIDYVLALN
Sequences:
>Translated_311_residues MANVSFYPIGTVGEKWGDAEKAAWFANTQIKRSYQDNVVTPLKAMESQLAEIGLSVVQYGALSIDSARYPLFAVRTATFD PNKKTVLVTGGVHGYETSGVHGALAFLANNAALYAERVNLVVAVCVSPWGYETINRWNPKAIDPNRSFYANSPAEESAAL MALVASVPQGFDVHVDLHETTDSDEDEFRPALAARDGKDFIPGTIPDGFYAVGDTENPQDAFQKAIIDGVSKVTHIAPAD EKGEIIGSTVVQHGVINYPLKALGLCSSVTGCIYNTTTEVYPDSPSATPAECNLAQVAAITSAIDYVLALN >Mature_310_residues ANVSFYPIGTVGEKWGDAEKAAWFANTQIKRSYQDNVVTPLKAMESQLAEIGLSVVQYGALSIDSARYPLFAVRTATFDP NKKTVLVTGGVHGYETSGVHGALAFLANNAALYAERVNLVVAVCVSPWGYETINRWNPKAIDPNRSFYANSPAEESAALM ALVASVPQGFDVHVDLHETTDSDEDEFRPALAARDGKDFIPGTIPDGFYAVGDTENPQDAFQKAIIDGVSKVTHIAPADE KGEIIGSTVVQHGVINYPLKALGLCSSVTGCIYNTTTEVYPDSPSATPAECNLAQVAAITSAIDYVLALN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33223; Mature: 33092
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVSFYPIGTVGEKWGDAEKAAWFANTQIKRSYQDNVVTPLKAMESQLAEIGLSVVQYG CCCCEEEECCCCCCCCCCHHHHEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC ALSIDSARYPLFAVRTATFDPNKKTVLVTGGVHGYETSGVHGALAFLANNAALYAERVNL CEEECCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHEE VVAVCVSPWGYETINRWNPKAIDPNRSFYANSPAEESAALMALVASVPQGFDVHVDLHET EEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECC TDSDEDEFRPALAARDGKDFIPGTIPDGFYAVGDTENPQDAFQKAIIDGVSKVTHIAPAD CCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC EKGEIIGSTVVQHGVINYPLKALGLCSSVTGCIYNTTTEVYPDSPSATPAECNLAQVAAI CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCEECCCCCCCCCCCCCHHHHHHH TSAIDYVLALN HHHHHHHEECC >Mature Secondary Structure ANVSFYPIGTVGEKWGDAEKAAWFANTQIKRSYQDNVVTPLKAMESQLAEIGLSVVQYG CCCEEEECCCCCCCCCCHHHHEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC ALSIDSARYPLFAVRTATFDPNKKTVLVTGGVHGYETSGVHGALAFLANNAALYAERVNL CEEECCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHEE VVAVCVSPWGYETINRWNPKAIDPNRSFYANSPAEESAALMALVASVPQGFDVHVDLHET EEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECC TDSDEDEFRPALAARDGKDFIPGTIPDGFYAVGDTENPQDAFQKAIIDGVSKVTHIAPAD CCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC EKGEIIGSTVVQHGVINYPLKALGLCSSVTGCIYNTTTEVYPDSPSATPAECNLAQVAAI CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCEECCCCCCCCCCCCCHHHHHHH TSAIDYVLALN HHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA