| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920733
Identifier: 117920733
GI number: 117920733
Start: 2754407
End: 2755432
Strand: Direct
Name: 117920733
Synonym: Shewana3_2290
Alternate gene names: NA
Gene position: 2754407-2755432 (Clockwise)
Preceding gene: 117920732
Following gene: 117920737
Centisome position: 55.4
GC content: 50.19
Gene sequence:
>1026_bases GTGTTACGTCAACTCGCGGTCTCTATCGCTACACTTATTGCACTTTCACACAGTTCACTTGCCCGTGCTGAAGCTTGGTT CGAGGTTGAAGTCTATATTTTTGAACGCCAAAGCCAGTCGACCGAACAATGGCCGATGGCGCCAATTGAGACCAAAACCA ACCGCGCTATCGATCTGATTTCACCGGTTGTGGGTCAAGCTGTGCTCTCCATGAGCAATGAATCTGCGCCCTGCACCTTA GTGTATGACGCCGATGCTAATAGCCATTGCGCTGAAAATACCAGCACAGGTACGAATACGGACGCCACTCCCGAGATGAG TAACGGCGGTACTTTAGCCATTTCAGGCCCAAGCACTGCAAGCTCAAATGCGGTAACCAGCTATCGCTATCCGAGTGTGA TCCCATCGGAAATCGGCAGTGGTAGCCAAGCCTACGCGTCTCAAGGCAGTGGCCCAGTATTACTCGCCAGCAGCCAAGGC CAATTTGCCAGCATCATCAACAGCCTATCGAGAGAGCGTGGTAACCGCAGCTTACTGCATATGACATGGCAACAACCTAT GATGGGCAAGAGTGGCTCAGTGCCCATTCGCCTGTTTGCGGGTAAAGATTATTCCGCCAGTTATCACTTCGATGGTCGTC AAATTGTGCAACAAGCCATGGCCACCTCAATGCAAGGTGCTAACGGCACGACTGGCATGATGGCTGAAACAGCGCCATTA CAGCCCTCTCCCGTGTGGCAACTCGATGGCACGCTCAATATTTATCTTAGCCATTATCTGTATATCGAAACCGCGCTCAA TTTGCGTAAAGAAGGCCGCAAATTGATGCCTGTGGCAGCCGATGAAGCGAGCATGAATACAGCAACAAGTACTGCCGTAA CCCCAGCAAAAGTGATGACACCTTATTTAATGTCTATTCCGTTGGAACAAAATCGTCGAGTGAAAAGTGATGAGATCCAC TATCTCGATCATCCCGAAATGGGCATGGTGATCCAAATCCGTAAGATGGCGCAACCTAACGCTTAA
Upstream 100 bases:
>100_bases AGTTAAAGTTCATCCTCAATGCCGAAACGGCAAAAGATAGGCTCGCTTTGGTCAAACTCTTGCTCGAACAACTATCGCAA CATCGTCTTGGAGATAAATA
Downstream 100 bases:
>100_bases AACCCATTAGCCCTAATCGAATAAAAAAGCGGTCATGCAATGCATACCGCTTTTTTATTGCCTAAGTTTTTTTATTGCCT AAGGGGTGAACAGCCATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLRQLAVSIATLIALSHSSLARAEAWFEVEVYIFERQSQSTEQWPMAPIETKTNRAIDLISPVVGQAVLSMSNESAPCTL VYDADANSHCAENTSTGTNTDATPEMSNGGTLAISGPSTASSNAVTSYRYPSVIPSEIGSGSQAYASQGSGPVLLASSQG QFASIINSLSRERGNRSLLHMTWQQPMMGKSGSVPIRLFAGKDYSASYHFDGRQIVQQAMATSMQGANGTTGMMAETAPL QPSPVWQLDGTLNIYLSHYLYIETALNLRKEGRKLMPVAADEASMNTATSTAVTPAKVMTPYLMSIPLEQNRRVKSDEIH YLDHPEMGMVIQIRKMAQPNA
Sequences:
>Translated_341_residues MLRQLAVSIATLIALSHSSLARAEAWFEVEVYIFERQSQSTEQWPMAPIETKTNRAIDLISPVVGQAVLSMSNESAPCTL VYDADANSHCAENTSTGTNTDATPEMSNGGTLAISGPSTASSNAVTSYRYPSVIPSEIGSGSQAYASQGSGPVLLASSQG QFASIINSLSRERGNRSLLHMTWQQPMMGKSGSVPIRLFAGKDYSASYHFDGRQIVQQAMATSMQGANGTTGMMAETAPL QPSPVWQLDGTLNIYLSHYLYIETALNLRKEGRKLMPVAADEASMNTATSTAVTPAKVMTPYLMSIPLEQNRRVKSDEIH YLDHPEMGMVIQIRKMAQPNA >Mature_341_residues MLRQLAVSIATLIALSHSSLARAEAWFEVEVYIFERQSQSTEQWPMAPIETKTNRAIDLISPVVGQAVLSMSNESAPCTL VYDADANSHCAENTSTGTNTDATPEMSNGGTLAISGPSTASSNAVTSYRYPSVIPSEIGSGSQAYASQGSGPVLLASSQG QFASIINSLSRERGNRSLLHMTWQQPMMGKSGSVPIRLFAGKDYSASYHFDGRQIVQQAMATSMQGANGTTGMMAETAPL QPSPVWQLDGTLNIYLSHYLYIETALNLRKEGRKLMPVAADEASMNTATSTAVTPAKVMTPYLMSIPLEQNRRVKSDEIH YLDHPEMGMVIQIRKMAQPNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36847; Mature: 36847
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQLAVSIATLIALSHSSLARAEAWFEVEVYIFERQSQSTEQWPMAPIETKTNRAIDLI CHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH SPVVGQAVLSMSNESAPCTLVYDADANSHCAENTSTGTNTDATPEMSNGGTLAISGPSTA HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC SSNAVTSYRYPSVIPSEIGSGSQAYASQGSGPVLLASSQGQFASIINSLSRERGNRSLLH CCCCEEEECCCCCCHHHCCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEE MTWQQPMMGKSGSVPIRLFAGKDYSASYHFDGRQIVQQAMATSMQGANGTTGMMAETAPL EEECCCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCEEECCCC QPSPVWQLDGTLNIYLSHYLYIETALNLRKEGRKLMPVAADEASMNTATSTAVTPAKVMT CCCCCEEECCEEEEEEEEEEEEHHHHHHHHCCCEECEEECCCCCCCCCCCCCCCCHHHHC PYLMSIPLEQNRRVKSDEIHYLDHPEMGMVIQIRKMAQPNA HHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MLRQLAVSIATLIALSHSSLARAEAWFEVEVYIFERQSQSTEQWPMAPIETKTNRAIDLI CHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH SPVVGQAVLSMSNESAPCTLVYDADANSHCAENTSTGTNTDATPEMSNGGTLAISGPSTA HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC SSNAVTSYRYPSVIPSEIGSGSQAYASQGSGPVLLASSQGQFASIINSLSRERGNRSLLH CCCCEEEECCCCCCHHHCCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEE MTWQQPMMGKSGSVPIRLFAGKDYSASYHFDGRQIVQQAMATSMQGANGTTGMMAETAPL EEECCCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCEEECCCC QPSPVWQLDGTLNIYLSHYLYIETALNLRKEGRKLMPVAADEASMNTATSTAVTPAKVMT CCCCCEEECCEEEEEEEEEEEEHHHHHHHHCCCEECEEECCCCCCCCCCCCCCCCHHHHC PYLMSIPLEQNRRVKSDEIHYLDHPEMGMVIQIRKMAQPNA HHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA