| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920710
Identifier: 117920710
GI number: 117920710
Start: 2729003
End: 2730877
Strand: Reverse
Name: 117920710
Synonym: Shewana3_2267
Alternate gene names: NA
Gene position: 2730877-2729003 (Counterclockwise)
Preceding gene: 117920714
Following gene: 117920708
Centisome position: 54.92
GC content: 48.69
Gene sequence:
>1875_bases ATGAACACAAAACGACTGCCGCTGGCCGGTGCGATACTGGCAAGTATACTCCTTGGTGCCTGTAATGGTGATGACGGTAC CAATGGTGAGCAGGGGGATAATGGCTTCAATTCATTAGTTAAAGTGACCGCACTCGCCATAGGTGATGCGAACTGTCCCG CCAGTGGTCAACGTATCGATACCGGGCTTGATGCGAATCGTAATGGCGAGTTGGAAGAAACTGAAATCGATGCGGCGCAA ACACAATTTATTTGCCAACCTCAAGCTGCGGGAGTCACAGCTGAGCTGATTGGCCGTCATCAAACGGGCGTTTATGGCCT GAGTGCCGCTGAGATTGTCGAATATCACAGTGCTTCTCAGCGTATTTTTGTGGTTAATGCGAGAAGCGGTAAAGTCGACA TTATCGATGCTCACTTACTTGGTAATGCGACCACGGCAACTGCGCCATTAGCCTTGAATAATCTTGATAAGCTCGGCGAG CTGGATGTCGCCAAGGATGTGGGCTTAAGTTTTATGGGCAGCGTTAACAGCGTCAGTATTTCTGGTAACTTGTTAGCGGC GGCCATTGAGCGCGGCGATGCGGCGGGCAATAAGACTCAAGCCAATGGTTATGTGGCTTTCTATCAACTCAACGGCAATG ACACGCCGCAGTATCTTAGCGCGGTTGAAGTTGGTGCATTACCGGATAACGTGGTGTTTAGTCATGATGGTAAAACGGTA CTCGTTGCCAACGAAGGCGAACCAAATCAAGACTATAGTGTCGATCCTGAGGGCAGTGTGGCCATTATCGCCATTGCGGA TGGTAAACCCGCAGCGACGGCAACGCTAGTGACATTCACCGAGTTCAATCAGGGCAATGCTCGCTATAATGAAATCACCA AGGACATTAAAATCAATGGCCCTATGGCCACTGTCGCGCAGGACTTAGAGCCTGAGTATATCAGTGTCAGTCCCGATAAC AGCCGTGCCTTCGTGAGTTTGCAGGAGAACAATGCCATCGCCGTGATTGATATCGCCAATGCCAAAGTGGCGAAGATTTT ACCTTTGGGACTGAAGGATTACGGTCTTGATGTGAATAAAATTGATGCAAGTGATAAGGACGATATGATCAACCTTCAGG CCTATGCGGGCGTATATGGCATGTATCAGCCTGATACCGTAGCGAGTTACCGTTGGAATAATGCTGATTTTATTGTTACC GCAAACGAAGGGGATTCCCGCGACTATGCTGGGTTTTCGGAGGAAGCCCGCGCCGGTGACTTAACCTTAGATCCTAATCA TCCACAATTTGCCGCCGCGAAAGATAAGACTCAATTAGCCCGTTTGAAAGTGACTAAGAGTATGGGGGATGAGGATAACG ACGGCGATTATGACAAAATCGTGAGCTTCGGCGCGCGCTCCTTCTCAATCTGGACGGCTGATGGTCAACAGGTGTTTGAC AGTGGTAGCGATTTTGAGCGGATCACCGCAGCCTTATTAGGCAATAACTTCAACAATAACAACGAAGAAAACAAAGGCGA TAGTCGCAGTGACGATAAGGGACCCGAGCCTGAAGCCTTAGCCCTCGGCAAAATTGGCCAGAAACTCTATGCCTTTATCG GGCTTGAACGTACCTCTGGTTTTATGATTTACGATGTGACCAATCCCTTTGACGTGCATTTTGTTGATTATGTGGTAAAC CGAGATTTTGAGGCGGATTTCAGCATAGATACAGATACTGGCGAAGTGAAAGGCGATGCCAGTTTGGCGGGAGATTTAGG GCCAGAAGGCATGAAGTTTGTGAGTACAGAGAAGAGTCCAAATGGTCAACCTCTGCTGATTATCGGCAATGAAGTCAGTG GCACAACCAGCGTGTACCAGATTAAGGTGCAATAG
Upstream 100 bases:
>100_bases AGTGTCATCTGTATGTCATCTAACCGTCTTGAATGCGGATTAGTTTAATGGGCTTTAGCTTAACCCTACGACTAATAACA ACACATTCAGGAATGATGCA
Downstream 100 bases:
>100_bases CCATAGTTTGTGTTCAAGGTGCTATAACGTTACATCTCGACACCTAAAATGCTTGTGATTAACCAAGTTTAAAACGCCAG AGCATCACTCTGGCGTTTCT
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline Phosphatase-Like Protein; 5-Nucleotidase Domain Protein; 5-Nucleotidase Domain-Containing Protein; Transcriptional Regulator MerR Family Protein; MerR Family Transcriptional Regulator; CHU Large Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; 5-Nucleotidase C-Terminal Domain Protein; Collagen Triple Helix Repeat Protein; 5-Nucleotidase/2' 3'-Cyclic Phosphodiesterase; Atypical Alkaline Phosphatase With Phytase-Like Insertion; Metallophosphoesterase; PEP-CTERM Exosortase Interaction Domain Protein; Ig Domain Domain Protein; Endonuclease/Exonuclease/Phosphatase; Ig Family Protein
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MNTKRLPLAGAILASILLGACNGDDGTNGEQGDNGFNSLVKVTALAIGDANCPASGQRIDTGLDANRNGELEETEIDAAQ TQFICQPQAAGVTAELIGRHQTGVYGLSAAEIVEYHSASQRIFVVNARSGKVDIIDAHLLGNATTATAPLALNNLDKLGE LDVAKDVGLSFMGSVNSVSISGNLLAAAIERGDAAGNKTQANGYVAFYQLNGNDTPQYLSAVEVGALPDNVVFSHDGKTV LVANEGEPNQDYSVDPEGSVAIIAIADGKPAATATLVTFTEFNQGNARYNEITKDIKINGPMATVAQDLEPEYISVSPDN SRAFVSLQENNAIAVIDIANAKVAKILPLGLKDYGLDVNKIDASDKDDMINLQAYAGVYGMYQPDTVASYRWNNADFIVT ANEGDSRDYAGFSEEARAGDLTLDPNHPQFAAAKDKTQLARLKVTKSMGDEDNDGDYDKIVSFGARSFSIWTADGQQVFD SGSDFERITAALLGNNFNNNNEENKGDSRSDDKGPEPEALALGKIGQKLYAFIGLERTSGFMIYDVTNPFDVHFVDYVVN RDFEADFSIDTDTGEVKGDASLAGDLGPEGMKFVSTEKSPNGQPLLIIGNEVSGTTSVYQIKVQ
Sequences:
>Translated_624_residues MNTKRLPLAGAILASILLGACNGDDGTNGEQGDNGFNSLVKVTALAIGDANCPASGQRIDTGLDANRNGELEETEIDAAQ TQFICQPQAAGVTAELIGRHQTGVYGLSAAEIVEYHSASQRIFVVNARSGKVDIIDAHLLGNATTATAPLALNNLDKLGE LDVAKDVGLSFMGSVNSVSISGNLLAAAIERGDAAGNKTQANGYVAFYQLNGNDTPQYLSAVEVGALPDNVVFSHDGKTV LVANEGEPNQDYSVDPEGSVAIIAIADGKPAATATLVTFTEFNQGNARYNEITKDIKINGPMATVAQDLEPEYISVSPDN SRAFVSLQENNAIAVIDIANAKVAKILPLGLKDYGLDVNKIDASDKDDMINLQAYAGVYGMYQPDTVASYRWNNADFIVT ANEGDSRDYAGFSEEARAGDLTLDPNHPQFAAAKDKTQLARLKVTKSMGDEDNDGDYDKIVSFGARSFSIWTADGQQVFD SGSDFERITAALLGNNFNNNNEENKGDSRSDDKGPEPEALALGKIGQKLYAFIGLERTSGFMIYDVTNPFDVHFVDYVVN RDFEADFSIDTDTGEVKGDASLAGDLGPEGMKFVSTEKSPNGQPLLIIGNEVSGTTSVYQIKVQ >Mature_624_residues MNTKRLPLAGAILASILLGACNGDDGTNGEQGDNGFNSLVKVTALAIGDANCPASGQRIDTGLDANRNGELEETEIDAAQ TQFICQPQAAGVTAELIGRHQTGVYGLSAAEIVEYHSASQRIFVVNARSGKVDIIDAHLLGNATTATAPLALNNLDKLGE LDVAKDVGLSFMGSVNSVSISGNLLAAAIERGDAAGNKTQANGYVAFYQLNGNDTPQYLSAVEVGALPDNVVFSHDGKTV LVANEGEPNQDYSVDPEGSVAIIAIADGKPAATATLVTFTEFNQGNARYNEITKDIKINGPMATVAQDLEPEYISVSPDN SRAFVSLQENNAIAVIDIANAKVAKILPLGLKDYGLDVNKIDASDKDDMINLQAYAGVYGMYQPDTVASYRWNNADFIVT ANEGDSRDYAGFSEEARAGDLTLDPNHPQFAAAKDKTQLARLKVTKSMGDEDNDGDYDKIVSFGARSFSIWTADGQQVFD SGSDFERITAALLGNNFNNNNEENKGDSRSDDKGPEPEALALGKIGQKLYAFIGLERTSGFMIYDVTNPFDVHFVDYVVN RDFEADFSIDTDTGEVKGDASLAGDLGPEGMKFVSTEKSPNGQPLLIIGNEVSGTTSVYQIKVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66328; Mature: 66328
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKRLPLAGAILASILLGACNGDDGTNGEQGDNGFNSLVKVTALAIGDANCPASGQRID CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCCEEE TGLDANRNGELEETEIDAAQTQFICQPQAAGVTAELIGRHQTGVYGLSAAEIVEYHSASQ CCCCCCCCCCCCHHHCCHHHHEEEECCCCCCCCHHHHCCCCCCEECCCHHHHHHHCCCCC RIFVVNARSGKVDIIDAHLLGNATTATAPLALNNLDKLGELDVAKDVGLSFMGSVNSVSI EEEEEECCCCCEEEEEEEEECCCCCCCCCEECCCHHHHCCCCHHHHCCHHHHCCCCEEEE SGNLLAAAIERGDAAGNKTQANGYVAFYQLNGNDTPQYLSAVEVGALPDNVVFSHDGKTV CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHEEECCCCCCEEEECCCCEE LVANEGEPNQDYSVDPEGSVAIIAIADGKPAATATLVTFTEFNQGNARYNEITKDIKING EEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHCCCEEEECC PMATVAQDLEPEYISVSPDNSRAFVSLQENNAIAVIDIANAKVAKILPLGLKDYGLDVNK CHHHHHHHCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCHHHCCCCEE IDASDKDDMINLQAYAGVYGMYQPDTVASYRWNNADFIVTANEGDSRDYAGFSEEARAGD ECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCC LTLDPNHPQFAAAKDKTQLARLKVTKSMGDEDNDGDYDKIVSFGARSFSIWTADGQQVFD EEECCCCCCEECCCCCHHEEEEEEHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHC SGSDFERITAALLGNNFNNNNEENKGDSRSDDKGPEPEALALGKIGQKLYAFIGLERTSG CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHEEEEEEEECCCC FMIYDVTNPFDVHFVDYVVNRDFEADFSIDTDTGEVKGDASLAGDLGPEGMKFVSTEKSP EEEEECCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCC NGQPLLIIGNEVSGTTSVYQIKVQ CCCEEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MNTKRLPLAGAILASILLGACNGDDGTNGEQGDNGFNSLVKVTALAIGDANCPASGQRID CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCCEEE TGLDANRNGELEETEIDAAQTQFICQPQAAGVTAELIGRHQTGVYGLSAAEIVEYHSASQ CCCCCCCCCCCCHHHCCHHHHEEEECCCCCCCCHHHHCCCCCCEECCCHHHHHHHCCCCC RIFVVNARSGKVDIIDAHLLGNATTATAPLALNNLDKLGELDVAKDVGLSFMGSVNSVSI EEEEEECCCCCEEEEEEEEECCCCCCCCCEECCCHHHHCCCCHHHHCCHHHHCCCCEEEE SGNLLAAAIERGDAAGNKTQANGYVAFYQLNGNDTPQYLSAVEVGALPDNVVFSHDGKTV CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHEEECCCCCCEEEECCCCEE LVANEGEPNQDYSVDPEGSVAIIAIADGKPAATATLVTFTEFNQGNARYNEITKDIKING EEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHCCCEEEECC PMATVAQDLEPEYISVSPDNSRAFVSLQENNAIAVIDIANAKVAKILPLGLKDYGLDVNK CHHHHHHHCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCHHHCCCCEE IDASDKDDMINLQAYAGVYGMYQPDTVASYRWNNADFIVTANEGDSRDYAGFSEEARAGD ECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCC LTLDPNHPQFAAAKDKTQLARLKVTKSMGDEDNDGDYDKIVSFGARSFSIWTADGQQVFD EEECCCCCCEECCCCCHHEEEEEEHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHC SGSDFERITAALLGNNFNNNNEENKGDSRSDDKGPEPEALALGKIGQKLYAFIGLERTSG CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHEEEEEEEECCCC FMIYDVTNPFDVHFVDYVVNRDFEADFSIDTDTGEVKGDASLAGDLGPEGMKFVSTEKSP EEEEECCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCC NGQPLLIIGNEVSGTTSVYQIKVQ CCCEEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA