| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is zraR [C]
Identifier: 117920663
GI number: 117920663
Start: 2667263
End: 2668960
Strand: Reverse
Name: zraR [C]
Synonym: Shewana3_2220
Alternate gene names: 117920663
Gene position: 2668960-2667263 (Counterclockwise)
Preceding gene: 117920664
Following gene: 117920662
Centisome position: 53.68
GC content: 40.46
Gene sequence:
>1698_bases GTGCCTAAAAGCCAACGCTATATTTTGGTCATTGAAGATGACCTAGTGACAAACCAAATTATTACCGCGTTTATTCACAG TAAAGGTTGGGGGGTGATCACTTGTTGTAGTTTAGAAGAGGCCAGTGAGGAAATTTACCAGCAGAATATTGAGCTTATCT TATTGGATTATTTTCTACCCGACGGTTCAGCTTTAACGTTATTAGAAAAATTAAGATATTGCGAGTCACCTGTACCAGTG ATTGTGATCAGCGCTGATAATGAGTATCAAAAAATATTATCTTGTTTTAGATTAGGCGCCCTCGATTACATTATTAAACC AATTAATTTAGAGCTATTTTGGCATAAAGTTGAAGGCCTGCTCGCACATTTTTCCTTAGAGAAACAAGTTAAGCAACAAC GCTCTATTTTAGAAAAGATGCTATATCAAAAAGCCCGCGAAGAACAAATGGCGAGGCACTTATTTGAGCATCTGGTCAAT ATCGGTAATGTCACTTACGATTTTGTCAAAACGTTTACTCAAGCCAGTGCCAATTTTAGCGGCGATATTATTCTCAATAC CGTGGGACCTAACGGTAATTTCTTTTTAATCATAGCCGACTCCACTGGCCATGGTTTAAGCGCGGCCATGCCGATTTTAC GGGTGGCGAATACCTTCAGAGCTATGGTAGCGAAAGGCTTTAATTTGGTGAGTTTGATTTACGAGCTCAATGCCAACGTG TATGAAGACAGCCCCGGCGATCGTTTTGTTGCTGCTATGGTATTGGAAGTCGATTTCTTTAAGAATCAGATACATCTTTG GAATGGCGGTATGCCGGATGCACTGCTTTACCAAGATGAGTTTGAGGGTTCAACCGGGCATAGCGAGCTGGACCATATAC AAAGATATCGCTCTAAAAATATGGCGCTGGGTATTTTATCGCCTAGTTCGTTTATCGCTAATATTGCTACATTCCCGATC CCTAAAACTGGCCGAATTTGTCTACTTAGTGACGGTTTAATCGAGCAACAGAGTAAAGGCGGTGTTTTTTTTGGCATGGA TAGCGTGATTTCACTGCTGAGTTTTTACGGCCGCGATTTAACCGAGCACCTTAAAGCAAAACTCAAAAGTATTTTTGAAC ATGAGATAACCGATGATATTGCCGTCTGCGTACTCGATTTTGAGTTATTAAATAACTGGTATCGAGAACGAGAACATAAA TCGAGTCAAATATGCATGAAAGGGGAGTTTGCTTGGGCGATAAAAATGATGGGGTCAATGCTGTTAAATGTCGATTATTT AAATTCACTGAATCAGTTTTTGAATATTTTTGGGTTTTCTACTACGTTTAGTCAGAGGGTATTTACTGTTGTTTCTGAGT TAGTTACCAACGCAGTGGACCATGGTGTGCTTAAGTTAGACTCGCGACTTAAAAATGATCCCGAGAGCTTTGAACTGTAC CACAGTATACGTGAAGGCAGCATAGACAAATTGATCGCTTCTGACTGGGTCAAGGTCGAGCTCGAATGGCATGCACAGTT AAATGAACTCAAGATTATCGTGTCCGACAGTGGTGAGGGTTATATCCCCAAAGAGCAGGCTGCATCAACAGATTGGTTTC AAATTTCGGGTCGTGGGCTTTTATTAGTCAAGTCTCTTTGTAAGAGCTATGAATTAGTGGCTCCAGGAAATAAAACTAAA GTCATAATGGAATTGTAA
Upstream 100 bases:
>100_bases ACAGATCAGCACGGCGATTCGAGGTTTGCACGGTCAAGCGGAAGAAATTATCAACATAGCTAATATGGGTCGTTTGTATC TTGTCGAACGGGATGTATAA
Downstream 100 bases:
>100_bases ATGAGCAAAAAAATATTAATTGTTGATGACTCGGCCGCGATTAGACAGATGGTCGAGGCGACATTAAAGTCGGCCAATTA CCAAGTCGTATTAGCAAAGG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator; Response Regulator Receiver Modulated Serine Phosphatase; Two-Component Response Regulator; Response Regulator Receiver Domain-Containing Protein; Response Regulator Receiver; Response Regulator Receiver Domain Protein; Two Component; Regulatory Components Of Sensory Transduction System; Flagellar Basal-Body Rod Protein FlgC; Two-Component System Response Regulator; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Transcriptional Regulatory Protein ZraR; Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Stage II Sporulation E Family Protein; GGDEF/Response Regulator Receiver Domain Protein; Sensor Kinase Of HydH/G Two-Component System; Phosphoserine Phosphatase; Transcriptional Regulatory Protein MalR; Response Regulator Putative Serine Phosphatase; Serine Phosphatase RsbU Regulator Sigma Subunit; Response Regulator Of Sigma Subunit Serine Phosphatase; Ntr Family Protein Two-Component System Response Regulator; Stage II Sporulation Protein E; Sigma Factor SigB Regulation Protein RsbU; PAS/PAC Sensor Protein; Acetoacetate Metabolism Regulatory Protein AtoC; Stage II Sporulation E; Sensor Histidine Kinase/Response Regulator; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MPKSQRYILVIEDDLVTNQIITAFIHSKGWGVITCCSLEEASEEIYQQNIELILLDYFLPDGSALTLLEKLRYCESPVPV IVISADNEYQKILSCFRLGALDYIIKPINLELFWHKVEGLLAHFSLEKQVKQQRSILEKMLYQKAREEQMARHLFEHLVN IGNVTYDFVKTFTQASANFSGDIILNTVGPNGNFFLIIADSTGHGLSAAMPILRVANTFRAMVAKGFNLVSLIYELNANV YEDSPGDRFVAAMVLEVDFFKNQIHLWNGGMPDALLYQDEFEGSTGHSELDHIQRYRSKNMALGILSPSSFIANIATFPI PKTGRICLLSDGLIEQQSKGGVFFGMDSVISLLSFYGRDLTEHLKAKLKSIFEHEITDDIAVCVLDFELLNNWYREREHK SSQICMKGEFAWAIKMMGSMLLNVDYLNSLNQFLNIFGFSTTFSQRVFTVVSELVTNAVDHGVLKLDSRLKNDPESFELY HSIREGSIDKLIASDWVKVELEWHAQLNELKIIVSDSGEGYIPKEQAASTDWFQISGRGLLLVKSLCKSYELVAPGNKTK VIMEL
Sequences:
>Translated_565_residues MPKSQRYILVIEDDLVTNQIITAFIHSKGWGVITCCSLEEASEEIYQQNIELILLDYFLPDGSALTLLEKLRYCESPVPV IVISADNEYQKILSCFRLGALDYIIKPINLELFWHKVEGLLAHFSLEKQVKQQRSILEKMLYQKAREEQMARHLFEHLVN IGNVTYDFVKTFTQASANFSGDIILNTVGPNGNFFLIIADSTGHGLSAAMPILRVANTFRAMVAKGFNLVSLIYELNANV YEDSPGDRFVAAMVLEVDFFKNQIHLWNGGMPDALLYQDEFEGSTGHSELDHIQRYRSKNMALGILSPSSFIANIATFPI PKTGRICLLSDGLIEQQSKGGVFFGMDSVISLLSFYGRDLTEHLKAKLKSIFEHEITDDIAVCVLDFELLNNWYREREHK SSQICMKGEFAWAIKMMGSMLLNVDYLNSLNQFLNIFGFSTTFSQRVFTVVSELVTNAVDHGVLKLDSRLKNDPESFELY HSIREGSIDKLIASDWVKVELEWHAQLNELKIIVSDSGEGYIPKEQAASTDWFQISGRGLLLVKSLCKSYELVAPGNKTK VIMEL >Mature_564_residues PKSQRYILVIEDDLVTNQIITAFIHSKGWGVITCCSLEEASEEIYQQNIELILLDYFLPDGSALTLLEKLRYCESPVPVI VISADNEYQKILSCFRLGALDYIIKPINLELFWHKVEGLLAHFSLEKQVKQQRSILEKMLYQKAREEQMARHLFEHLVNI GNVTYDFVKTFTQASANFSGDIILNTVGPNGNFFLIIADSTGHGLSAAMPILRVANTFRAMVAKGFNLVSLIYELNANVY EDSPGDRFVAAMVLEVDFFKNQIHLWNGGMPDALLYQDEFEGSTGHSELDHIQRYRSKNMALGILSPSSFIANIATFPIP KTGRICLLSDGLIEQQSKGGVFFGMDSVISLLSFYGRDLTEHLKAKLKSIFEHEITDDIAVCVLDFELLNNWYREREHKS SQICMKGEFAWAIKMMGSMLLNVDYLNSLNQFLNIFGFSTTFSQRVFTVVSELVTNAVDHGVLKLDSRLKNDPESFELYH SIREGSIDKLIASDWVKVELEWHAQLNELKIIVSDSGEGYIPKEQAASTDWFQISGRGLLLVKSLCKSYELVAPGNKTKV IMEL
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. When Activated By Zras It Acts In Conjunction With Sigma-54 To Regulate The Expression Of Zrap. Positively Autoregulates The Expression Of The Zrasr Operon. [C]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790437, Length=116, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63928; Mature: 63797
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSQRYILVIEDDLVTNQIITAFIHSKGWGVITCCSLEEASEEIYQQNIELILLDYFLP CCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCEEEEEEECC DGSALTLLEKLRYCESPVPVIVISADNEYQKILSCFRLGALDYIIKPINLELFWHKVEGL CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHH LAHFSLEKQVKQQRSILEKMLYQKAREEQMARHLFEHLVNIGNVTYDFVKTFTQASANFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC GDIILNTVGPNGNFFLIIADSTGHGLSAAMPILRVANTFRAMVAKGFNLVSLIYELNANV CCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC YEDSPGDRFVAAMVLEVDFFKNQIHLWNGGMPDALLYQDEFEGSTGHSELDHIQRYRSKN CCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCC MALGILSPSSFIANIATFPIPKTGRICLLSDGLIEQQSKGGVFFGMDSVISLLSFYGRDL CEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCEEEEHHHHHHHHHHHCCCH TEHLKAKLKSIFEHEITDDIAVCVLDFELLNNWYREREHKSSQICMKGEFAWAIKMMGSM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH LLNVDYLNSLNQFLNIFGFSTTFSQRVFTVVSELVTNAVDHGVLKLDSRLKNDPESFELY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHH HSIREGSIDKLIASDWVKVELEWHAQLNELKIIVSDSGEGYIPKEQAASTDWFQISGRGL HHHHCCCHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHCCCCCEEEECCCCH LLVKSLCKSYELVAPGNKTKVIMEL HHHHHHHHCCEEECCCCCCEEEEEC >Mature Secondary Structure PKSQRYILVIEDDLVTNQIITAFIHSKGWGVITCCSLEEASEEIYQQNIELILLDYFLP CCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCEEEEEEECC DGSALTLLEKLRYCESPVPVIVISADNEYQKILSCFRLGALDYIIKPINLELFWHKVEGL CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHH LAHFSLEKQVKQQRSILEKMLYQKAREEQMARHLFEHLVNIGNVTYDFVKTFTQASANFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC GDIILNTVGPNGNFFLIIADSTGHGLSAAMPILRVANTFRAMVAKGFNLVSLIYELNANV CCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC YEDSPGDRFVAAMVLEVDFFKNQIHLWNGGMPDALLYQDEFEGSTGHSELDHIQRYRSKN CCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCC MALGILSPSSFIANIATFPIPKTGRICLLSDGLIEQQSKGGVFFGMDSVISLLSFYGRDL CEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCEEEEHHHHHHHHHHHCCCH TEHLKAKLKSIFEHEITDDIAVCVLDFELLNNWYREREHKSSQICMKGEFAWAIKMMGSM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH LLNVDYLNSLNQFLNIFGFSTTFSQRVFTVVSELVTNAVDHGVLKLDSRLKNDPESFELY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHH HSIREGSIDKLIASDWVKVELEWHAQLNELKIIVSDSGEGYIPKEQAASTDWFQISGRGL HHHHCCCHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHCCCCCEEEECCCCH LLVKSLCKSYELVAPGNKTKVIMEL HHHHHHHHCCEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA