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The map label for this gene is cheD1 [H]

Identifier: 117920657

GI number: 117920657

Start: 2660806

End: 2661426

Strand: Reverse

Name: cheD1 [H]

Synonym: Shewana3_2214

Alternate gene names: 117920657

Gene position: 2661426-2660806 (Counterclockwise)

Preceding gene: 117920658

Following gene: 117920656

Centisome position: 53.53

GC content: 46.38

Gene sequence:

>621_bases
GTGCCAAAACCGAATATTGAGTACCCTGTTATCGAGCCGAATCGGTATTTTGACCATCATTTTGGCTGTGACGCCGTAAA
AATTCTACCAGGAGAATTCTACGCCACACGGGATCAAACCATGATAGTCACAGTGTTAGGCTCATGCATTTCAGTATGCC
TCTATGATCCTGACTTAAGAATTGGGGGAATGAACCATTTTTTATTACCGAGCGATAATGGCAACAGTTCTGGGATATTA
ACCGATTCGGCCCGCTACGGTGTATACGCCATGGAGTTGCTGATTAACGAGTTGCTCAAACTCGGTGCGCGGCGCCGCGC
CTTGGTCGCTAAAGTGTTTGGTGGCGGCAACATGCTCAACGGGATCACCGCCCATAATATTGGGGAGCGCAATGCGGAGT
TTGTGCTCGAGTATTTGCAGGTGGAGCAAATTCCAATATTGGCAGCGGATTTACTCGATTTTTATCCTCGAAAAGTATAT
TTCTTCCCCGGGACGGGATTAGTCAAAGTACGAAAAATCAAAACGATGCATAACAGCACCATTATGGACAGGGAAAGTGA
ATATCGCCTACGGATCAGGAATTTGCCCAGTGGCGGAGATGTAGAATTTTTTGGTGACTAA

Upstream 100 bases:

>100_bases
TGGTCTCTACATCGCTGGCCATTCGGAGAACTTTAATATGTTCCCCCAGATCATTAAGCCCGTGGGCCAAACAACCTACA
AGGCGGTAAAGGGAGCTTGA

Downstream 100 bases:

>100_bases
GCGATGACGATAAAAGTACTAGTGGTAGATGATTCGGCACTGATCCGTAACCTATTGGGCAAAATGATCGAGGCTGATCC
TGAGTTATCTTTGGTGGGTA

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MPKPNIEYPVIEPNRYFDHHFGCDAVKILPGEFYATRDQTMIVTVLGSCISVCLYDPDLRIGGMNHFLLPSDNGNSSGIL
TDSARYGVYAMELLINELLKLGARRRALVAKVFGGGNMLNGITAHNIGERNAEFVLEYLQVEQIPILAADLLDFYPRKVY
FFPGTGLVKVRKIKTMHNSTIMDRESEYRLRIRNLPSGGDVEFFGD

Sequences:

>Translated_206_residues
MPKPNIEYPVIEPNRYFDHHFGCDAVKILPGEFYATRDQTMIVTVLGSCISVCLYDPDLRIGGMNHFLLPSDNGNSSGIL
TDSARYGVYAMELLINELLKLGARRRALVAKVFGGGNMLNGITAHNIGERNAEFVLEYLQVEQIPILAADLLDFYPRKVY
FFPGTGLVKVRKIKTMHNSTIMDRESEYRLRIRNLPSGGDVEFFGD
>Mature_205_residues
PKPNIEYPVIEPNRYFDHHFGCDAVKILPGEFYATRDQTMIVTVLGSCISVCLYDPDLRIGGMNHFLLPSDNGNSSGILT
DSARYGVYAMELLINELLKLGARRRALVAKVFGGGNMLNGITAHNIGERNAEFVLEYLQVEQIPILAADLLDFYPRKVYF
FPGTGLVKVRKIKTMHNSTIMDRESEYRLRIRNLPSGGDVEFFGD

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 23180; Mature: 23049

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPNIEYPVIEPNRYFDHHFGCDAVKILPGEFYATRDQTMIVTVLGSCISVCLYDPDLR
CCCCCCCCCEECCCCCCCCCCCCCEEEECCCCEEECCCCEEHHHHHHHHHHEEEECCCEE
IGGMNHFLLPSDNGNSSGILTDSARYGVYAMELLINELLKLGARRRALVAKVFGGGNMLN
ECCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEC
GITAHNIGERNAEFVLEYLQVEQIPILAADLLDFYPRKVYFFPGTGLVKVRKIKTMHNST
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHCCE
IMDRESEYRLRIRNLPSGGDVEFFGD
ECCCCCCEEEEEEECCCCCCEEEECC
>Mature Secondary Structure 
PKPNIEYPVIEPNRYFDHHFGCDAVKILPGEFYATRDQTMIVTVLGSCISVCLYDPDLR
CCCCCCCCEECCCCCCCCCCCCCEEEECCCCEEECCCCEEHHHHHHHHHHEEEECCCEE
IGGMNHFLLPSDNGNSSGILTDSARYGVYAMELLINELLKLGARRRALVAKVFGGGNMLN
ECCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEC
GITAHNIGERNAEFVLEYLQVEQIPILAADLLDFYPRKVYFFPGTGLVKVRKIKTMHNST
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHCCE
IMDRESEYRLRIRNLPSGGDVEFFGD
ECCCCCCEEEEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]