Click here to switch to the map view.

The map label for this gene is 117920642

Identifier: 117920642

GI number: 117920642

Start: 2639207

End: 2639989

Strand: Reverse

Name: 117920642

Synonym: Shewana3_2199

Alternate gene names: NA

Gene position: 2639989-2639207 (Counterclockwise)

Preceding gene: 117920643

Following gene: 117920639

Centisome position: 53.09

GC content: 51.09

Gene sequence:

>783_bases
GTGTTACTCCATCAGCAATATACCCGCCATGGCCCCGATTATCGCTTCGGGGAGCAAATGACCTTTCTGGATGTAAAGCA
AACCTTTGGTTTTAGCCATGTACGTGTGGGGCGTTGGGTTACGCGGGAAGAGTCATTGATTGCCGCGAATTTAGTGTTTG
ATTCGCTTGCCGATCTTGCTTTTATCCTCAATTTACCGCCGTTGACTTTAGGGTTGAGGCAAACCCTAAGCCTTGCTTTT
GGCCATGGTGGACAAAAGGGCGTGCAGGCTCACTATGCGCCAGGGGCGCGAGAGCTGGCGTTAGCCAAAAATGCGGGTGC
TGGGGCGCTGGCCCATGAGTTTTGGCATGCCTTTGACCATTATGTGGCACTCAAGGCGTTTTCACGAGTCTCGGGGCGTT
TTAAGTGTGCTAGCGATCTTTGGCTTGCGGATCTGCCACTTATCGAGCATCCGCTCAATCAGCGGTTGGCCGAAATTTTT
AGGGTGACATTACTCTCCGAGGACAATTTGGAGCCAAGCGATTATGTGCGTCGCGCCATAGCCTTAGATAAGCGTTATGG
CGCGCAGTATTTTGCTAAACCGACGGAAATGATGGCCCGCGCGTTTGAAGCTTGCATCGAATCCTATCAAGGGATCCAAA
ATCCCTATTTAGTCTCTGGCACGCACCATTCTGCGTTGGCGAAGGAAGGGGCTTATCCCGATGAGCAGCATAGGCTGCGT
ATCTTTAATGCTTTGATTGCTTACTTTGAGCCATTAGGCATGGCCTTAGGGAAAGCGGGATAA

Upstream 100 bases:

>100_bases
GTTCAATAGAAGTAAGATTGTTGTCTGTGAAGCTATAAATCGATTCTGCTTTCACATAGAATCACTTCCATACTATGTTC
ACCCACGACTTTAACCGATA

Downstream 100 bases:

>100_bases
GCTGACTGGCTTAGTCCGCGAGTTGCTGACAGTAGGCCAGCTGGTGGCGAATCGCATCGAGATATTGCGAGGCGTGATAA
TCCATCAGGTACCAAGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLLHQQYTRHGPDYRFGEQMTFLDVKQTFGFSHVRVGRWVTREESLIAANLVFDSLADLAFILNLPPLTLGLRQTLSLAF
GHGGQKGVQAHYAPGARELALAKNAGAGALAHEFWHAFDHYVALKAFSRVSGRFKCASDLWLADLPLIEHPLNQRLAEIF
RVTLLSEDNLEPSDYVRRAIALDKRYGAQYFAKPTEMMARAFEACIESYQGIQNPYLVSGTHHSALAKEGAYPDEQHRLR
IFNALIAYFEPLGMALGKAG

Sequences:

>Translated_260_residues
MLLHQQYTRHGPDYRFGEQMTFLDVKQTFGFSHVRVGRWVTREESLIAANLVFDSLADLAFILNLPPLTLGLRQTLSLAF
GHGGQKGVQAHYAPGARELALAKNAGAGALAHEFWHAFDHYVALKAFSRVSGRFKCASDLWLADLPLIEHPLNQRLAEIF
RVTLLSEDNLEPSDYVRRAIALDKRYGAQYFAKPTEMMARAFEACIESYQGIQNPYLVSGTHHSALAKEGAYPDEQHRLR
IFNALIAYFEPLGMALGKAG
>Mature_260_residues
MLLHQQYTRHGPDYRFGEQMTFLDVKQTFGFSHVRVGRWVTREESLIAANLVFDSLADLAFILNLPPLTLGLRQTLSLAF
GHGGQKGVQAHYAPGARELALAKNAGAGALAHEFWHAFDHYVALKAFSRVSGRFKCASDLWLADLPLIEHPLNQRLAEIF
RVTLLSEDNLEPSDYVRRAIALDKRYGAQYFAKPTEMMARAFEACIESYQGIQNPYLVSGTHHSALAKEGAYPDEQHRLR
IFNALIAYFEPLGMALGKAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29120; Mature: 29120

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHQQYTRHGPDYRFGEQMTFLDVKQTFGFSHVRVGRWVTREESLIAANLVFDSLADLA
CCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHH
FILNLPPLTLGLRQTLSLAFGHGGQKGVQAHYAPGARELALAKNAGAGALAHEFWHAFDH
HHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
YVALKAFSRVSGRFKCASDLWLADLPLIEHPLNQRLAEIFRVTLLSEDNLEPSDYVRRAI
HHHHHHHHHHCCCCEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ALDKRYGAQYFAKPTEMMARAFEACIESYQGIQNPYLVSGTHHSALAKEGAYPDEQHRLR
HHHHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCHHHHHH
IFNALIAYFEPLGMALGKAG
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLLHQQYTRHGPDYRFGEQMTFLDVKQTFGFSHVRVGRWVTREESLIAANLVFDSLADLA
CCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHH
FILNLPPLTLGLRQTLSLAFGHGGQKGVQAHYAPGARELALAKNAGAGALAHEFWHAFDH
HHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
YVALKAFSRVSGRFKCASDLWLADLPLIEHPLNQRLAEIFRVTLLSEDNLEPSDYVRRAI
HHHHHHHHHHCCCCEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ALDKRYGAQYFAKPTEMMARAFEACIESYQGIQNPYLVSGTHHSALAKEGAYPDEQHRLR
HHHHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCHHHHHH
IFNALIAYFEPLGMALGKAG
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA