| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117920641
Identifier: 117920641
GI number: 117920641
Start: 2638294
End: 2639196
Strand: Direct
Name: 117920641
Synonym: Shewana3_2198
Alternate gene names: NA
Gene position: 2638294-2639196 (Clockwise)
Preceding gene: 117920640
Following gene: 117920650
Centisome position: 53.06
GC content: 49.94
Gene sequence:
>903_bases ATGCACCGTCAATTGGCTGAGCCACAACCTAGGATTTGCCTTCGCACACTCGCAGAGCAACTTAAGCTTGAGCAAGTGAC CATTATTGGCAATGCCTCTGGCGAGTGGCAGCCCGCGGCCGAAGGCCTCACTTTTATCTTTAATGGCACGCAGTGGTCGC AGCAGAATGCTCCCCAAGGTCAAGTGGTCAATATTGCCAATGGCGGCTTTGCTGAGTCGCAGTATGCCTTTGAAGTTCAA GGTCATCCGCAAGCTGTGCAACTGGCGAAAGCATTGACACAAGTCGCTACCGATCTCACCGCATCCCTTGGTTGTTGGCC ATCTTCAGGCTTAACGACAGTTGTACTCATGCTGCAATTGGCGAATCACGTACAGGTTCAGCGGATGTCGCTGTTGCCAA GCTTACAGCGCAGTATTGAACTGCCGGAGACACTCCATTTACCCTGCATGGTGCATAACTGGCTAGGGGAAAGAAGAATC GCAAAGACGCTGTTGTGTGAACGCTTAGATTGGGTCGAGTTTACATTGATGCCTTGGGAGCCAATGTCTAAGGACTGTGA AACAGATGAAGTCAGTGAAACAGATAGCAGTAAGAATAAACAGACTTTATCTGAGGATCCCTTCGAACAGCTGGAATTAC TCAGACAATCCAACCTCGCCCCAAGTGTAAGCGAGGAGACTAAACAAACCCTACGTCACCACTTAGCGACCCTTGCACAC ACGCCTTATGAGATTTGGCAACAATGTGCCGATCACAGCAAGCTTAAAGCGAGCGAGCCTTTATTCTTTAATCATCTTCC CGAAAGCCAAACGAGTCCTTGGTACCTGATGGATTATCACGCCTCGCAATATCTCGATGCGATTCGCCACCAGCTGGCCT ACTGTCAGCAACTCGCGGACTAA
Upstream 100 bases:
>100_bases AACAGAAGATCCGCTACAATACCCATCTTTGTTTTAGAGAGTCCTTGCGAGTATGTCCTATCCACAGCCCTTAGCCGATG CGCCTCAGTCCCATACGCAT
Downstream 100 bases:
>100_bases GCCAGTCAGCTTATCCCGCTTTCCCTAAGGCCATGCCTAATGGCTCAAAGTAAGCAATCAAAGCATTAAAGATACGCAGC CTATGCTGCTCATCGGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MHRQLAEPQPRICLRTLAEQLKLEQVTIIGNASGEWQPAAEGLTFIFNGTQWSQQNAPQGQVVNIANGGFAESQYAFEVQ GHPQAVQLAKALTQVATDLTASLGCWPSSGLTTVVLMLQLANHVQVQRMSLLPSLQRSIELPETLHLPCMVHNWLGERRI AKTLLCERLDWVEFTLMPWEPMSKDCETDEVSETDSSKNKQTLSEDPFEQLELLRQSNLAPSVSEETKQTLRHHLATLAH TPYEIWQQCADHSKLKASEPLFFNHLPESQTSPWYLMDYHASQYLDAIRHQLAYCQQLAD
Sequences:
>Translated_300_residues MHRQLAEPQPRICLRTLAEQLKLEQVTIIGNASGEWQPAAEGLTFIFNGTQWSQQNAPQGQVVNIANGGFAESQYAFEVQ GHPQAVQLAKALTQVATDLTASLGCWPSSGLTTVVLMLQLANHVQVQRMSLLPSLQRSIELPETLHLPCMVHNWLGERRI AKTLLCERLDWVEFTLMPWEPMSKDCETDEVSETDSSKNKQTLSEDPFEQLELLRQSNLAPSVSEETKQTLRHHLATLAH TPYEIWQQCADHSKLKASEPLFFNHLPESQTSPWYLMDYHASQYLDAIRHQLAYCQQLAD >Mature_300_residues MHRQLAEPQPRICLRTLAEQLKLEQVTIIGNASGEWQPAAEGLTFIFNGTQWSQQNAPQGQVVNIANGGFAESQYAFEVQ GHPQAVQLAKALTQVATDLTASLGCWPSSGLTTVVLMLQLANHVQVQRMSLLPSLQRSIELPETLHLPCMVHNWLGERRI AKTLLCERLDWVEFTLMPWEPMSKDCETDEVSETDSSKNKQTLSEDPFEQLELLRQSNLAPSVSEETKQTLRHHLATLAH TPYEIWQQCADHSKLKASEPLFFNHLPESQTSPWYLMDYHASQYLDAIRHQLAYCQQLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33983; Mature: 33983
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRQLAEPQPRICLRTLAEQLKLEQVTIIGNASGEWQPAAEGLTFIFNGTQWSQQNAPQG CCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCC QVVNIANGGFAESQYAFEVQGHPQAVQLAKALTQVATDLTASLGCWPSSGLTTVVLMLQL CEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ANHVQVQRMSLLPSLQRSIELPETLHLPCMVHNWLGERRIAKTLLCERLDWVEFTLMPWE HHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCC PMSKDCETDEVSETDSSKNKQTLSEDPFEQLELLRQSNLAPSVSEETKQTLRHHLATLAH CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC TPYEIWQQCADHSKLKASEPLFFNHLPESQTSPWYLMDYHASQYLDAIRHQLAYCQQLAD CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHRQLAEPQPRICLRTLAEQLKLEQVTIIGNASGEWQPAAEGLTFIFNGTQWSQQNAPQG CCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCC QVVNIANGGFAESQYAFEVQGHPQAVQLAKALTQVATDLTASLGCWPSSGLTTVVLMLQL CEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ANHVQVQRMSLLPSLQRSIELPETLHLPCMVHNWLGERRIAKTLLCERLDWVEFTLMPWE HHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCC PMSKDCETDEVSETDSSKNKQTLSEDPFEQLELLRQSNLAPSVSEETKQTLRHHLATLAH CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC TPYEIWQQCADHSKLKASEPLFFNHLPESQTSPWYLMDYHASQYLDAIRHQLAYCQQLAD CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA