| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920640
Identifier: 117920640
GI number: 117920640
Start: 2637057
End: 2637953
Strand: Direct
Name: 117920640
Synonym: Shewana3_2197
Alternate gene names: NA
Gene position: 2637057-2637953 (Clockwise)
Preceding gene: 117920634
Following gene: 117920641
Centisome position: 53.04
GC content: 45.6
Gene sequence:
>897_bases ATGCATAAGGTATTCGCTACCCTCGTTCTTTTAACGTATAGCTTCATTGTTCAAGCCAATTCGATCAGTGTTGAGCGAGT CTCTGAACAAGTACATCTTTTAAAAGGCATAGATTACGGCACCAATATTGGACTGATATTGACGCAGGATGGTTTAGTGC TTATCGATCCTATGCCTGGGGATGAACACTTAGGTGCTCTGGATGATGCGATTCAATCTCTCTATGTCAAACCCGTTAAA TTCATCTTAAATACCCATGAACACGCCGATCATACCGGCGGTAATCAGCACTTTATCCAACAGGGTGCGAGCCTAGTGCC AACGCAAGACACAGTTCCATCGCAAAACGTATCTTCACTAAAAGTACCGTTGCAAAATACAGCCCAGATGCAGAACACGG TGGCAGCGCAAAAAACTGTGCCAATGCAACCCGTGATAACCGATATATTGGCCACCCAAGTATCATCCCATTCATCAGCT GACTGGATTTATTTTCATCCATGGAGCAACAGCCTGTTTGTCGGCGATATTGTCGATAACAGCTGGCATCCGACTTTTTA TGCTGGTGGTATTAGCGGATTTAATGCCGCCATCAACCATATTTTAGCCATAGGTAATGAGGACAGCCTTATCGTACCTG GCCATGGTAAGCCAAGTAGTAAGGCATCCCTGCGCCGCTTTCAGCAAAACACCAATGACTGGGTGCAACATATCGAGTCG CTAATTGACTCAGGCAAGAGTGTGGAACAGATAACCCAACATCCACAGATCGCAGAGCGGGTTGCGCGCTTTAATCAGGA GGGCAAATCCCCTTTTCTGCCGCCAAAAGCCTTGAGGAAATTTATCGAACGTACCATTGCCGTGATAGAAAAAGAACGTC AAACATCGGGAAAATAA
Upstream 100 bases:
>100_bases TCACAAATTAGGCCGAGTTGCGCAATAGCTCGCAACTCGAATGCGGTCGATAATGCTTAAAGAACCCATCGATTAGGCTA AACCAGAGAGTGATTTCACT
Downstream 100 bases:
>100_bases CGGATAAATACTATTTTGAGGACGAAAGTTCATAGCTAGAGTTTACAAAACAAAGGCTCCAACGGCTTAGCGGGCAATAC TATTCGCAGCTCAATAGCCC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Secreted Hydrolase; Beta-Lactamase-Like; Zn-Dependent Hydrolase Glyoxylase Family Protein; Glyoxylase-Like Zinc-Dependent Hydrolase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Domain Protein; Cyclase/Dehydrase
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MHKVFATLVLLTYSFIVQANSISVERVSEQVHLLKGIDYGTNIGLILTQDGLVLIDPMPGDEHLGALDDAIQSLYVKPVK FILNTHEHADHTGGNQHFIQQGASLVPTQDTVPSQNVSSLKVPLQNTAQMQNTVAAQKTVPMQPVITDILATQVSSHSSA DWIYFHPWSNSLFVGDIVDNSWHPTFYAGGISGFNAAINHILAIGNEDSLIVPGHGKPSSKASLRRFQQNTNDWVQHIES LIDSGKSVEQITQHPQIAERVARFNQEGKSPFLPPKALRKFIERTIAVIEKERQTSGK
Sequences:
>Translated_298_residues MHKVFATLVLLTYSFIVQANSISVERVSEQVHLLKGIDYGTNIGLILTQDGLVLIDPMPGDEHLGALDDAIQSLYVKPVK FILNTHEHADHTGGNQHFIQQGASLVPTQDTVPSQNVSSLKVPLQNTAQMQNTVAAQKTVPMQPVITDILATQVSSHSSA DWIYFHPWSNSLFVGDIVDNSWHPTFYAGGISGFNAAINHILAIGNEDSLIVPGHGKPSSKASLRRFQQNTNDWVQHIES LIDSGKSVEQITQHPQIAERVARFNQEGKSPFLPPKALRKFIERTIAVIEKERQTSGK >Mature_298_residues MHKVFATLVLLTYSFIVQANSISVERVSEQVHLLKGIDYGTNIGLILTQDGLVLIDPMPGDEHLGALDDAIQSLYVKPVK FILNTHEHADHTGGNQHFIQQGASLVPTQDTVPSQNVSSLKVPLQNTAQMQNTVAAQKTVPMQPVITDILATQVSSHSSA DWIYFHPWSNSLFVGDIVDNSWHPTFYAGGISGFNAAINHILAIGNEDSLIVPGHGKPSSKASLRRFQQNTNDWVQHIES LIDSGKSVEQITQHPQIAERVARFNQEGKSPFLPPKALRKFIERTIAVIEKERQTSGK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32836; Mature: 32836
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00743 BETA_LACTAMASE_B_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKVFATLVLLTYSFIVQANSISVERVSEQVHLLKGIDYGTNIGLILTQDGLVLIDPMPG CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCC DEHLGALDDAIQSLYVKPVKFILNTHEHADHTGGNQHFIQQGASLVPTQDTVPSQNVSSL CHHCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCE KVPLQNTAQMQNTVAAQKTVPMQPVITDILATQVSSHSSADWIYFHPWSNSLFVGDIVDN ECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCC SWHPTFYAGGISGFNAAINHILAIGNEDSLIVPGHGKPSSKASLRRFQQNTNDWVQHIES CCCCCEEECCCCHHHHHHHHHHEECCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHH LIDSGKSVEQITQHPQIAERVARFNQEGKSPFLPPKALRKFIERTIAVIEKERQTSGK HHHCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHKVFATLVLLTYSFIVQANSISVERVSEQVHLLKGIDYGTNIGLILTQDGLVLIDPMPG CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCC DEHLGALDDAIQSLYVKPVKFILNTHEHADHTGGNQHFIQQGASLVPTQDTVPSQNVSSL CHHCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCE KVPLQNTAQMQNTVAAQKTVPMQPVITDILATQVSSHSSADWIYFHPWSNSLFVGDIVDN ECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCC SWHPTFYAGGISGFNAAINHILAIGNEDSLIVPGHGKPSSKASLRRFQQNTNDWVQHIES CCCCCEEECCCCHHHHHHHHHHEECCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHH LIDSGKSVEQITQHPQIAERVARFNQEGKSPFLPPKALRKFIERTIAVIEKERQTSGK HHHCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA