Click here to switch to the map view.

The map label for this gene is 117920633

Identifier: 117920633

GI number: 117920633

Start: 2630141

End: 2631034

Strand: Direct

Name: 117920633

Synonym: Shewana3_2190

Alternate gene names: NA

Gene position: 2630141-2631034 (Clockwise)

Preceding gene: 117920622

Following gene: 117920634

Centisome position: 52.9

GC content: 40.6

Gene sequence:

>894_bases
ATGACAACAACTAAAGAACTTGATCCTGTTTTAGCTGAGCGATACAGGTTTATAGATTTCCTACTGCTGTTCAAAGGTCA
GCTAACTCGTGCAGAGCTGGTTAAACGATTCAGCATTGGTGAAGCTACAGCAAGTAGAACTATAGCCTCCTTTTTGGAAA
AGTATCCTGAAGAGACGGAGTATTTGGGGCCAAGGTATGGTTATAGAGCGAATCCATTCTATCAACATAAATATGAGCAT
AACGCAGTTACAGGACTGCAATACACAGCTTACGGCACTCTTACTCAAATACTAGATGTACAACGGTATGGAATAGTCAT
CAATAAGTTTGCCAAGCAACTTGATGTAGCTAATGTGGCGCCTGTTTGTAGAGCTATAGTAAATAACGCTAGTTTGCACA
TTCAGTATGCATCTACAACCTCTGGTATTAAAGATAGAGTGGTGACCCCCCATTCTATATTTGAGGCCGGAGGGTTTTGG
TATTTCCGAGCATATGATAAGTCTGCATATGAGTTTCGAACGTTTAAACTCAGTCGAGTTATCAAAGTATTCCAATTACA
TCCTGACTCGTCCAACGATTATTCCAAGGCTCGTGACGATAGTTGGAACCGTCAAAGAATGGTAGAACTTATGGCACATC
CGAGAAATCCGATCCCAGATGCACAATTATCTGATATAGGTATTAAAGACGGTGAGCACCGATCAATCCTTGTTTCGGAG
GCTTTAATAGGTTTTGTACTTAATGATATGAGAGTGGATTGCTCTACAAGCCACAAACTCAACTTTATAGAGTATCCGTT
GGCTCTAAAAAATCGTACTGAACTACTTTCTGTTGAGTCTATGCAGTTTGCTCCTGGCTTTACATCGAGCACTGATAATA
GAAGCAGATTGTGA

Upstream 100 bases:

>100_bases
ATATATGTATCAAAAGATACTAAATAATGGTAATATCTTTAGAAGGACTGGCCGTAACTAACTTATCTGGAACAACTGTG
CGGAGCTTAATTGAGTCGTT

Downstream 100 bases:

>100_bases
GTATTATTGAAAATAACTCTTCGTAGTAATTAATTGAGTCCAAAGTTTTTCTAAAGCAATACGAACGCTTGTTCCTAGCG
CCGTTTATGACCAGTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTTTKELDPVLAERYRFIDFLLLFKGQLTRAELVKRFSIGEATASRTIASFLEKYPEETEYLGPRYGYRANPFYQHKYEH
NAVTGLQYTAYGTLTQILDVQRYGIVINKFAKQLDVANVAPVCRAIVNNASLHIQYASTTSGIKDRVVTPHSIFEAGGFW
YFRAYDKSAYEFRTFKLSRVIKVFQLHPDSSNDYSKARDDSWNRQRMVELMAHPRNPIPDAQLSDIGIKDGEHRSILVSE
ALIGFVLNDMRVDCSTSHKLNFIEYPLALKNRTELLSVESMQFAPGFTSSTDNRSRL

Sequences:

>Translated_297_residues
MTTTKELDPVLAERYRFIDFLLLFKGQLTRAELVKRFSIGEATASRTIASFLEKYPEETEYLGPRYGYRANPFYQHKYEH
NAVTGLQYTAYGTLTQILDVQRYGIVINKFAKQLDVANVAPVCRAIVNNASLHIQYASTTSGIKDRVVTPHSIFEAGGFW
YFRAYDKSAYEFRTFKLSRVIKVFQLHPDSSNDYSKARDDSWNRQRMVELMAHPRNPIPDAQLSDIGIKDGEHRSILVSE
ALIGFVLNDMRVDCSTSHKLNFIEYPLALKNRTELLSVESMQFAPGFTSSTDNRSRL
>Mature_296_residues
TTTKELDPVLAERYRFIDFLLLFKGQLTRAELVKRFSIGEATASRTIASFLEKYPEETEYLGPRYGYRANPFYQHKYEHN
AVTGLQYTAYGTLTQILDVQRYGIVINKFAKQLDVANVAPVCRAIVNNASLHIQYASTTSGIKDRVVTPHSIFEAGGFWY
FRAYDKSAYEFRTFKLSRVIKVFQLHPDSSNDYSKARDDSWNRQRMVELMAHPRNPIPDAQLSDIGIKDGEHRSILVSEA
LIGFVLNDMRVDCSTSHKLNFIEYPLALKNRTELLSVESMQFAPGFTSSTDNRSRL

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34037; Mature: 33906

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTKELDPVLAERYRFIDFLLLFKGQLTRAELVKRFSIGEATASRTIASFLEKYPEETE
CCCCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH
YLGPRYGYRANPFYQHKYEHNAVTGLQYTAYGTLTQILDVQRYGIVINKFAKQLDVANVA
HCCCCCCCCCCCCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
PVCRAIVNNASLHIQYASTTSGIKDRVVTPHSIFEAGGFWYFRAYDKSAYEFRTFKLSRV
HHHHHHHCCCEEEEEECCCCCCCHHCCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
IKVFQLHPDSSNDYSKARDDSWNRQRMVELMAHPRNPIPDAQLSDIGIKDGEHRSILVSE
HHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ALIGFVLNDMRVDCSTSHKLNFIEYPLALKNRTELLSVESMQFAPGFTSSTDNRSRL
HHHHHHHHHCEECCCCCCCCEEEECCHHHCCCHHHEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTTKELDPVLAERYRFIDFLLLFKGQLTRAELVKRFSIGEATASRTIASFLEKYPEETE
CCCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH
YLGPRYGYRANPFYQHKYEHNAVTGLQYTAYGTLTQILDVQRYGIVINKFAKQLDVANVA
HCCCCCCCCCCCCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
PVCRAIVNNASLHIQYASTTSGIKDRVVTPHSIFEAGGFWYFRAYDKSAYEFRTFKLSRV
HHHHHHHCCCEEEEEECCCCCCCHHCCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
IKVFQLHPDSSNDYSKARDDSWNRQRMVELMAHPRNPIPDAQLSDIGIKDGEHRSILVSE
HHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ALIGFVLNDMRVDCSTSHKLNFIEYPLALKNRTELLSVESMQFAPGFTSSTDNRSRL
HHHHHHHHHCEECCCCCCCCEEEECCHHHCCCHHHEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA