| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920606
Identifier: 117920606
GI number: 117920606
Start: 2590896
End: 2591384
Strand: Reverse
Name: 117920606
Synonym: Shewana3_2162
Alternate gene names: NA
Gene position: 2591384-2590896 (Counterclockwise)
Preceding gene: 117920607
Following gene: 117920605
Centisome position: 52.12
GC content: 50.31
Gene sequence:
>489_bases ATGCAAATCGATGTTCCTTTAATCAACGAAGCCCAAATTGGCTCCCGCTTAAATGCGGCAATCGAACACAACAGGCGAGG AGAGTTCGCCCTGTTGCTATCGCTATTGTCTGCAGATGCGAGGGACATGGCGCAGTTTCAATGGCAAAAAGAGCTCGATA ATGCAGAAAAATTGCAACGTCAGTTTGAGTTACCCCCAAAGCAAGCGCTTCTAGCGGATTTATCGACGGATAACAATGTT ACCGACAATAGTGCTGTTTTCGCCGAGCAAGGGGCGAGGGCGTTTCAACTGCAACAGGCATTGCGCCCTGAAGCCTTAGT GATCCGCGGTGGCGAGCCTATCGCCATGGCCGAAGCCTTAAGTAATTGCGATCTCACCACACGCCTGCGTCAACGTGGGC AATTGCCATCTCCTAAAATGGACATCATGCATTTTGCCGATCAACTGGCGATTCAACGTAACTTGATGCCGTTATTAGCC AGCGCCTAG
Upstream 100 bases:
>100_bases GAAACGTTTGGCATGTAAAGTCTAAATATGAAAATTTTCCTAAAGTTCTGGTTCAACTGGTCGATTAACTAACAACGAGT TGTTTTAATGATGTTTTTTT
Downstream 100 bases:
>100_bases CCAGTATGTCGTCTTGCCTCTAACTCGCTTTCGGGCTGTTGAGGAATATTCAGTCTTTAAAAGCACATCTAGGCTTTAAG GGACTTGTTGACCAAATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MQIDVPLINEAQIGSRLNAAIEHNRRGEFALLLSLLSADARDMAQFQWQKELDNAEKLQRQFELPPKQALLADLSTDNNV TDNSAVFAEQGARAFQLQQALRPEALVIRGGEPIAMAEALSNCDLTTRLRQRGQLPSPKMDIMHFADQLAIQRNLMPLLA SA
Sequences:
>Translated_162_residues MQIDVPLINEAQIGSRLNAAIEHNRRGEFALLLSLLSADARDMAQFQWQKELDNAEKLQRQFELPPKQALLADLSTDNNV TDNSAVFAEQGARAFQLQQALRPEALVIRGGEPIAMAEALSNCDLTTRLRQRGQLPSPKMDIMHFADQLAIQRNLMPLLA SA >Mature_162_residues MQIDVPLINEAQIGSRLNAAIEHNRRGEFALLLSLLSADARDMAQFQWQKELDNAEKLQRQFELPPKQALLADLSTDNNV TDNSAVFAEQGARAFQLQQALRPEALVIRGGEPIAMAEALSNCDLTTRLRQRGQLPSPKMDIMHFADQLAIQRNLMPLLA SA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18031; Mature: 18031
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIDVPLINEAQIGSRLNAAIEHNRRGEFALLLSLLSADARDMAQFQWQKELDNAEKLQR CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH QFELPPKQALLADLSTDNNVTDNSAVFAEQGARAFQLQQALRPEALVIRGGEPIAMAEAL HHCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHH SNCDLTTRLRQRGQLPSPKMDIMHFADQLAIQRNLMPLLASA HCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQIDVPLINEAQIGSRLNAAIEHNRRGEFALLLSLLSADARDMAQFQWQKELDNAEKLQR CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH QFELPPKQALLADLSTDNNVTDNSAVFAEQGARAFQLQQALRPEALVIRGGEPIAMAEAL HHCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHH SNCDLTTRLRQRGQLPSPKMDIMHFADQLAIQRNLMPLLASA HCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA