| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920605
Identifier: 117920605
GI number: 117920605
Start: 2590359
End: 2590646
Strand: Reverse
Name: 117920605
Synonym: Shewana3_2161
Alternate gene names: NA
Gene position: 2590646-2590359 (Counterclockwise)
Preceding gene: 117920606
Following gene: 117920604
Centisome position: 52.1
GC content: 49.65
Gene sequence:
>288_bases ATGAAAGGTATCATTGCAGGACAAGCGGCTACCGTAAACGACACTTGCACCGATTGTGGCAGTTTTGTGGATATTGGCGC TGTGATTGATGAGCAGGATACAATGCTGGAGTTATCCTTTGCGGGTGCACAGGCTGAGGTCGAAGCCAGCAAGATGCTGG AACGGGCTCAAGCACGCTTTAGCCAAACCCAAGGAAACATTGTCAAGAATGACGCGGGCGTTACCCTCAAGCTGGTCTTC GATGTGAGTGTCGAGAAGATGATTTTCCAATTAGAGAACGGGCTGTAA
Upstream 100 bases:
>100_bases CTGACGTCACAGTTATCTATAATAAGGCGTTAATGATGCAGCTTTAAGTTGATGCATCACCCTTAAATGCAGCTGTATAG CGATTAATGAGGAAAAACAG
Downstream 100 bases:
>100_bases GCATAAAACCCTGCGGTAAATGTTGATTAATTTGTAATAAATTGTGCTCGATGTTGCTGTTTGAAATGCCAATGTGTAAT CTGCATCGACAAAAATATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARFSQTQGNIVKNDAGVTLKLVF DVSVEKMIFQLENGL
Sequences:
>Translated_95_residues MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARFSQTQGNIVKNDAGVTLKLVF DVSVEKMIFQLENGL >Mature_95_residues MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARFSQTQGNIVKNDAGVTLKLVF DVSVEKMIFQLENGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10145; Mature: 10145
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARF CCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH SQTQGNIVKNDAGVTLKLVFDVSVEKMIFQLENGL HHCCCCEEECCCCEEEEEEECCCHHHHHHHHHCCC >Mature Secondary Structure MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARF CCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH SQTQGNIVKNDAGVTLKLVFDVSVEKMIFQLENGL HHCCCCEEECCCCEEEEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA