Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117920605

Identifier: 117920605

GI number: 117920605

Start: 2590359

End: 2590646

Strand: Reverse

Name: 117920605

Synonym: Shewana3_2161

Alternate gene names: NA

Gene position: 2590646-2590359 (Counterclockwise)

Preceding gene: 117920606

Following gene: 117920604

Centisome position: 52.1

GC content: 49.65

Gene sequence:

>288_bases
ATGAAAGGTATCATTGCAGGACAAGCGGCTACCGTAAACGACACTTGCACCGATTGTGGCAGTTTTGTGGATATTGGCGC
TGTGATTGATGAGCAGGATACAATGCTGGAGTTATCCTTTGCGGGTGCACAGGCTGAGGTCGAAGCCAGCAAGATGCTGG
AACGGGCTCAAGCACGCTTTAGCCAAACCCAAGGAAACATTGTCAAGAATGACGCGGGCGTTACCCTCAAGCTGGTCTTC
GATGTGAGTGTCGAGAAGATGATTTTCCAATTAGAGAACGGGCTGTAA

Upstream 100 bases:

>100_bases
CTGACGTCACAGTTATCTATAATAAGGCGTTAATGATGCAGCTTTAAGTTGATGCATCACCCTTAAATGCAGCTGTATAG
CGATTAATGAGGAAAAACAG

Downstream 100 bases:

>100_bases
GCATAAAACCCTGCGGTAAATGTTGATTAATTTGTAATAAATTGTGCTCGATGTTGCTGTTTGAAATGCCAATGTGTAAT
CTGCATCGACAAAAATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARFSQTQGNIVKNDAGVTLKLVF
DVSVEKMIFQLENGL

Sequences:

>Translated_95_residues
MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARFSQTQGNIVKNDAGVTLKLVF
DVSVEKMIFQLENGL
>Mature_95_residues
MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARFSQTQGNIVKNDAGVTLKLVF
DVSVEKMIFQLENGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10145; Mature: 10145

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARF
CCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
SQTQGNIVKNDAGVTLKLVFDVSVEKMIFQLENGL
HHCCCCEEECCCCEEEEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MKGIIAGQAATVNDTCTDCGSFVDIGAVIDEQDTMLELSFAGAQAEVEASKMLERAQARF
CCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
SQTQGNIVKNDAGVTLKLVFDVSVEKMIFQLENGL
HHCCCCEEECCCCEEEEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA