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The map label for this gene is 117920588

Identifier: 117920588

GI number: 117920588

Start: 2567673

End: 2569055

Strand: Reverse

Name: 117920588

Synonym: Shewana3_2144

Alternate gene names: NA

Gene position: 2569055-2567673 (Counterclockwise)

Preceding gene: 117920592

Following gene: 117920587

Centisome position: 51.67

GC content: 48.37

Gene sequence:

>1383_bases
ATGTCTGAACCGACAGCGTTAAGTCTTATTCCACCTCTGGTGGTATTGGTGTTGGCCATTTGGTTACGCCGCCCCATTCT
TTCTCTGATCATTGGTGCGGTAACTGGTTTCCTGTTACTCGATCCGTCGCAAGTCTTAAATAATTTCGCCAGCACTTCAT
TAAAAGTCATGGCCGATGAAACCATCGGTTGGTTGATTTTAGTCTGTGGTTGTTTTGGTGCGTTAATTGCCCTGTTAGTG
CGTACTGGTGGTGCACTGGCGTTTGGTCGAAATGCACTAAAATTTGCTAAAGGCCCTAAATCCTCTCTGTTTATGACCTT
TATTCTCGGGATTGTGATTTTTATCGATGACTATCTGAACGCGTTAACCGTGGGTGAAACCATGAAGCGTGTGACCGATA
AGTTTAAAGTGTCCCGTGAAATGCTAGCCTATGTGGTTGACTCTACCGCAGCGCCAGTGTGCGTGCTCGTGCCATTATCC
ACCTGGGCAGTATTCTTTGGTGGCTTGCTGGTCGATAACGGTGTGGCGGCAGAAGGTCAGGGCATTAGCGTATATATGCA
GGCGATCCCCTACATGCTTTACGCTTGGTTAGCCGTAGCTATGGTGTTACTGGTGGTGTTAGGTGTTGTGCCTGCCATTG
GTCCGATGAAAAAAGCCCAGCTGCGCGCCGCCCAAGGTGAACCTGCTGAGGCGCAAGTCGATTTAGACCAGGTACAAACC
TCTGACGAATACGCGATTGCTGCGATTGAAGAAGAGTTTAAGCATGCCGACAATCAGGGCAAGCTGCACAACTTCTTAGT
GCCTATTCTGCTACTGGTTGCCTTTACCGTTTATTTTGATATCGACGTGTGGAAGGGCTTGTTAGCGACATTAGTTATCA
CGCTGCCTTACTATGCAGTGCAACGTTTAATGCCACTGTCAGAAATGATGGATCAGATGATCGATGGTTTTAAGAGCATG
CTGCCCGCTATTGGTACCGTGATCGCCGCATTCGTGTTTAAGGATGTATGTGATGCGCTGCTGCTGCCACAATATGTGAT
TGAATCATTGAGCCCATTCATGACGCCTAAGATGTTGCCTGCGGTAGTATTCCTCTCTATGGCGATCCTTGCCTTTGCGA
CGGGTTCAAGCTGGGGTATTTTTGCGGTGACCATTCCAATTGTGATGCCACTGGCGCAATCGGTTGGTGCGGATATTCCA
CTGGTGATTGGTGCGCTGCTGTCGGCATCATCATTTGGTAGCCAAGCGTGTTTCTACTCAGATTCAACCGTATTGGCCGC
ACAAGGCTCTGGTTGTAACTTAGTGAGCCATGCGGTGACTCAGTTACCCTATGCGTTAATTGCCGCTGTGATTGCGTTCT
TTGGCTTTATCTTGATTGCCTAA

Upstream 100 bases:

>100_bases
ATCATGAAGCAGCAATATTGGCGTCCGTGATCGAGGTGATTTCAGGCGCTGTTCTAAAAACTTTTGCCCTTTAGGCAACT
TATTTAGAGGACCTAAGTGC

Downstream 100 bases:

>100_bases
GCTGCGATGCAGTAAATATAAAAAACCAGCTACGGCTGGTTTTTTTATTGCCAACGTTTATTGAGCGTGTTGACTGGCTC
GCGCCACTAAAGAACTCTTC

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASTSLKVMADETIGWLILVCGCFGALIALLV
RTGGALAFGRNALKFAKGPKSSLFMTFILGIVIFIDDYLNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLS
TWAVFFGGLLVDNGVAAEGQGISVYMQAIPYMLYAWLAVAMVLLVVLGVVPAIGPMKKAQLRAAQGEPAEAQVDLDQVQT
SDEYAIAAIEEEFKHADNQGKLHNFLVPILLLVAFTVYFDIDVWKGLLATLVITLPYYAVQRLMPLSEMMDQMIDGFKSM
LPAIGTVIAAFVFKDVCDALLLPQYVIESLSPFMTPKMLPAVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIP
LVIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALIAAVIAFFGFILIA

Sequences:

>Translated_460_residues
MSEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASTSLKVMADETIGWLILVCGCFGALIALLV
RTGGALAFGRNALKFAKGPKSSLFMTFILGIVIFIDDYLNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLS
TWAVFFGGLLVDNGVAAEGQGISVYMQAIPYMLYAWLAVAMVLLVVLGVVPAIGPMKKAQLRAAQGEPAEAQVDLDQVQT
SDEYAIAAIEEEFKHADNQGKLHNFLVPILLLVAFTVYFDIDVWKGLLATLVITLPYYAVQRLMPLSEMMDQMIDGFKSM
LPAIGTVIAAFVFKDVCDALLLPQYVIESLSPFMTPKMLPAVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIP
LVIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALIAAVIAFFGFILIA
>Mature_459_residues
SEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASTSLKVMADETIGWLILVCGCFGALIALLVR
TGGALAFGRNALKFAKGPKSSLFMTFILGIVIFIDDYLNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLST
WAVFFGGLLVDNGVAAEGQGISVYMQAIPYMLYAWLAVAMVLLVVLGVVPAIGPMKKAQLRAAQGEPAEAQVDLDQVQTS
DEYAIAAIEEEFKHADNQGKLHNFLVPILLLVAFTVYFDIDVWKGLLATLVITLPYYAVQRLMPLSEMMDQMIDGFKSML
PAIGTVIAAFVFKDVCDALLLPQYVIESLSPFMTPKMLPAVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIPL
VIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALIAAVIAFFGFILIA

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 49206; Mature: 49075

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASTSLKVMADE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH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CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]