| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920545
Identifier: 117920545
GI number: 117920545
Start: 2524671
End: 2524961
Strand: Direct
Name: 117920545
Synonym: Shewana3_2101
Alternate gene names: NA
Gene position: 2524671-2524961 (Clockwise)
Preceding gene: 117920543
Following gene: 117920546
Centisome position: 50.78
GC content: 41.58
Gene sequence:
>291_bases GTGGAGCGGATCGCTGCTCATCCTGGAAATCCGATTGGCAATATTGTCGAACTCTGGGAAGAACAGGAAATCGGTGTGAC TAAAGAAGCAAAGTTATTGAAGGTAATTGACCGCTTATTGCCATTCTTACATAACATGACTAGCGAAGGCCAAGCTTGGA GGGATAATGGAATACATAAAGCCCAAGTGTTGAATATGCACCAATTTATCGAGAAGGAAAGTCCTGAAATTTTTTCATGG TTTGTTATACAGCTCGAATATGCCGTTGAACAAGGTTGGCTTAAAGCATGA
Upstream 100 bases:
>100_bases TCATTTTGTCACCTAACGTTGTTATGCTGCCATCATAGCAGCTCTAATTAGGTGGCCAAATTCACTATGCCACTACACTC ATATATTAGAACGTGAGAGC
Downstream 100 bases:
>100_bases TCTTTCATTGGTTGTTTCTTGTCTATCCAGACTAGGCCCGTAACTTGTCGATGCCCCATTCAAAGTTATCAACACGACTT GAGATGAGCATCACTAGCCT
Product: putative metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MERIAAHPGNPIGNIVELWEEQEIGVTKEAKLLKVIDRLLPFLHNMTSEGQAWRDNGIHKAQVLNMHQFIEKESPEIFSW FVIQLEYAVEQGWLKA
Sequences:
>Translated_96_residues MERIAAHPGNPIGNIVELWEEQEIGVTKEAKLLKVIDRLLPFLHNMTSEGQAWRDNGIHKAQVLNMHQFIEKESPEIFSW FVIQLEYAVEQGWLKA >Mature_96_residues MERIAAHPGNPIGNIVELWEEQEIGVTKEAKLLKVIDRLLPFLHNMTSEGQAWRDNGIHKAQVLNMHQFIEKESPEIFSW FVIQLEYAVEQGWLKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11137; Mature: 11137
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERIAAHPGNPIGNIVELWEEQEIGVTKEAKLLKVIDRLLPFLHNMTSEGQAWRDNGIHK CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCH AQVLNMHQFIEKESPEIFSWFVIQLEYAVEQGWLKA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MERIAAHPGNPIGNIVELWEEQEIGVTKEAKLLKVIDRLLPFLHNMTSEGQAWRDNGIHK CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCH AQVLNMHQFIEKESPEIFSWFVIQLEYAVEQGWLKA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA