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The map label for this gene is fdhE [H]

Identifier: 117920536

GI number: 117920536

Start: 2511326

End: 2512225

Strand: Direct

Name: fdhE [H]

Synonym: Shewana3_2092

Alternate gene names: 117920536

Gene position: 2511326-2512225 (Clockwise)

Preceding gene: 117920535

Following gene: 117920539

Centisome position: 50.51

GC content: 50.44

Gene sequence:

>900_bases
ATGAAGATGGCCAGCGATATCCCGTTAAGTTTTGTTGATAAATCCCCCTTAGCATTGAAACCGCTAAAAGCGGCAGATCC
TGAGAAAATTTATCAACATAGAGCACGTCGTTTAGCCCAATTAGCGCAGGATTCTCCGCTGGCGGATTATCTTAAGCTTT
GCCAAATCCTTGTGTCGACGCAGCAAAAACTGGCTGCAACGGAAATGGGCCCAGCGCCAAAGATTGACCCTGAGGTGCCA
TATCCGTTGTCCCTAAGCCAAACTCAAACGGCTCAGGATTGGTTAAAAGCATTGCAAGCATTGCTAACAAAATTGGTATC
TCAAGTGCCCACGCATTTAGTGCCTGTTCTACAGGAGTTACAACAGCAGTCGCCAACTCAATTGCTAGAGTGGGGCACTC
AACTGAGGCAAGGGGAGTTTAGTGCCGTGCCTGCGCAGTACAGCCTATTTATTTGGGCGGGATTGTCCTTGTATTGGTCA
CACTGGGCCCCCATGGTGATTGCACGAATGGATGTGAATAAGGTTAAACAGTCTAGCCTTTGCCCGGTGTGCGGCAGTCA
TCCCGTCGCCAGCATGATTGTCGATGAGCCACGGGAAGGGCTGCGCTATCTGCATTGCAGTCTGTGTGAAAGCGAGTGGC
ACTATGTGCGCGCCCATTGTACCTGCTGCGAGCAATCCCGGGAGATGTCAATTTGGTCGTTTGATGACCATAAGGCAGCC
GTGCGGATTGAGAGCTGCGAGGCGTGCAAGGGATACACTAAGATGTTGTTTACCAACCGTTTGCCATTGTTAGATGCGGC
AGCGGACGATATCGCATCGATGGGATTGGATGCCGAGCTCAATGCAAAGGGCTATGGTGCCACAACGGTAAATCCACTGT
TACTTGCACATGAAGCCTAA

Upstream 100 bases:

>100_bases
TTGAAGGCTCTATCACAGGGATGCTCTACGGCAAAGTCTCTAAGGCTTGGGCCCGTAAGCACCATCCAGCGATGTTAGAA
GAACACGAGGAAAAATAGCA

Downstream 100 bases:

>100_bases
ATAGTAAAAAGGATTAATAAACAAGGCCATGGATGGTTTTGATACTGTATGTTCCATTCGGTCACCACTTAGTGTGACCG
AATGGTCATCGACTGTGATA

Product: formate dehydrogenase accessory protein FdhE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKMASDIPLSFVDKSPLALKPLKAADPEKIYQHRARRLAQLAQDSPLADYLKLCQILVSTQQKLAATEMGPAPKIDPEVP
YPLSLSQTQTAQDWLKALQALLTKLVSQVPTHLVPVLQELQQQSPTQLLEWGTQLRQGEFSAVPAQYSLFIWAGLSLYWS
HWAPMVIARMDVNKVKQSSLCPVCGSHPVASMIVDEPREGLRYLHCSLCESEWHYVRAHCTCCEQSREMSIWSFDDHKAA
VRIESCEACKGYTKMLFTNRLPLLDAAADDIASMGLDAELNAKGYGATTVNPLLLAHEA

Sequences:

>Translated_299_residues
MKMASDIPLSFVDKSPLALKPLKAADPEKIYQHRARRLAQLAQDSPLADYLKLCQILVSTQQKLAATEMGPAPKIDPEVP
YPLSLSQTQTAQDWLKALQALLTKLVSQVPTHLVPVLQELQQQSPTQLLEWGTQLRQGEFSAVPAQYSLFIWAGLSLYWS
HWAPMVIARMDVNKVKQSSLCPVCGSHPVASMIVDEPREGLRYLHCSLCESEWHYVRAHCTCCEQSREMSIWSFDDHKAA
VRIESCEACKGYTKMLFTNRLPLLDAAADDIASMGLDAELNAKGYGATTVNPLLLAHEA
>Mature_299_residues
MKMASDIPLSFVDKSPLALKPLKAADPEKIYQHRARRLAQLAQDSPLADYLKLCQILVSTQQKLAATEMGPAPKIDPEVP
YPLSLSQTQTAQDWLKALQALLTKLVSQVPTHLVPVLQELQQQSPTQLLEWGTQLRQGEFSAVPAQYSLFIWAGLSLYWS
HWAPMVIARMDVNKVKQSSLCPVCGSHPVASMIVDEPREGLRYLHCSLCESEWHYVRAHCTCCEQSREMSIWSFDDHKAA
VRIESCEACKGYTKMLFTNRLPLLDAAADDIASMGLDAELNAKGYGATTVNPLLLAHEA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family [H]

Homologues:

Organism=Escherichia coli, GI1790324, Length=278, Percent_Identity=36.6906474820144, Blast_Score=205, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006452 [H]

Pfam domain/function: PF04216 FdhE [H]

EC number: NA

Molecular weight: Translated: 33287; Mature: 33287

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMASDIPLSFVDKSPLALKPLKAADPEKIYQHRARRLAQLAQDSPLADYLKLCQILVST
CCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QQKLAATEMGPAPKIDPEVPYPLSLSQTQTAQDWLKALQALLTKLVSQVPTHLVPVLQEL
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQSPTQLLEWGTQLRQGEFSAVPAQYSLFIWAGLSLYWSHWAPMVIARMDVNKVKQSSL
HHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
CPVCGSHPVASMIVDEPREGLRYLHCSLCESEWHYVRAHCTCCEQSREMSIWSFDDHKAA
CCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
VRIESCEACKGYTKMLFTNRLPLLDAAADDIASMGLDAELNAKGYGATTVNPLLLAHEA
EEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKMASDIPLSFVDKSPLALKPLKAADPEKIYQHRARRLAQLAQDSPLADYLKLCQILVST
CCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QQKLAATEMGPAPKIDPEVPYPLSLSQTQTAQDWLKALQALLTKLVSQVPTHLVPVLQEL
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQSPTQLLEWGTQLRQGEFSAVPAQYSLFIWAGLSLYWSHWAPMVIARMDVNKVKQSSL
HHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
CPVCGSHPVASMIVDEPREGLRYLHCSLCESEWHYVRAHCTCCEQSREMSIWSFDDHKAA
CCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
VRIESCEACKGYTKMLFTNRLPLLDAAADDIASMGLDAELNAKGYGATTVNPLLLAHEA
EEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]