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The map label for this gene is 117920529

Identifier: 117920529

GI number: 117920529

Start: 2497516

End: 2500353

Strand: Reverse

Name: 117920529

Synonym: Shewana3_2085

Alternate gene names: NA

Gene position: 2500353-2497516 (Counterclockwise)

Preceding gene: 117920537

Following gene: 117920528

Centisome position: 50.29

GC content: 43.2

Gene sequence:

>2838_bases
ATGTTTAAACAGACTTATTTGGCAAGTGCTATTCTGCTTGCTCTTGCTAGTCAAGCGACGTATGCGGCAGAAGCTGAAGC
GACACAATCGCCTCAGACGGAAGAAACGTCACGCCCCTCTTCTGGCGGTAAAGCGCAAAATAACGAAGAGATGGAGATCA
TTCAGGTTCAGGGGATCCGTGGTAGTTTAAATAAAGCGGTAGAACTTAAACGCCAAAACATTCAAGTTGTCGATGCCATT
ATTGCCGAAGATATCGGTAAGTTCCCAGATAATAACGTGGTTGAAGCCTTGCAACGGGTAACGGGTGTTCAAGTGACTGA
CCGTGCATCAGGTGAAGCCAATACCGTGAGTATTCGTGGTTTAACCGACGTAACCACTACAGTTAACGGCCGTCAAGTTT
TCACTGCAGCAGGTCGTGAAGTCGCTATTGCTGACGTACCTGCGGCATTACTCGGCAGTGTTGAAGTCTTTAAAACCCGC
TCTTCTTCTCAAGTCGCCAGCGGTATCGCGGGTCAAATTGACATTCGTACCCATAGACCTTTTGATTTCCAAGAAGAAAA
AATTTCGGTAGCAGCCAAAGGGATTTACTCTGATCAGCCTGACACTATCGATCCCAATTTCAGCGCCTTAATTAGCGACC
GCTGGGATACCAGCATCGGTGAAGTCGGCGCATTAGTTAACGTCTCCTATATCCGCACCAACTATAATGATCAAGTGGTT
GCACCTGGCGCATCAATGCCCTATTACGCTGAAACTGGTGTCCAAATCCCTGATACTTATTGGAAGCGTGGCCTAGCCCA
TGGTTTAGATACCAGTGAAGGGGCATTAATCAACGGTCAGGAATATCTGCTCATGCGCGACGCCGTATTCCAAAATATGA
ATAACGGTGAGCGTGAACGTCCAGCACTGAACCTATCATTGCAATGGGCGCCAACTGACACTTCCGAATATCTTTTTGAA
GCATTCTATAACGGTTATCGTAATGATAACTTCAACTCTATGCTCTTTAGTAACGTAGATTCATCCGCTAACTGGAGCCA
AGTGATTCAAGATGGTATTGAAGTTTATGATGGTACCAACGTGGTAAAATCGCGAACTGCCTATAACGTTGACGGATTTA
GCAGTTCAGACCATAGCCATAACAAAACAGATAGTTATGTATTTGCCTTAGGAGGTAAGTGGGACTTTGATAATTTGACC
TTAAAGTCTGAAGTGGTCTATCAAACCAGTACCTATGAATCACAATTTCTGGCGATGCGCGGTGTAAGCGCGAATAGCAC
TAAGACTTTCTACGGTGTTGATGTTGACTATAACAACAAAAGTGGTGGTGTACCTAGTTGGGTTTATTTAGATAATCCAG
ATACAGATATTAATGAGTCTGATTTAACTCAATATGCCCTATGGCAAACGGCTCAATTATACGATAGTGGCGCTAAGGAC
GAAGGTGATTCAGTTACTTGGACATTCGATGGTGACTATTTCCTCGACTACGGCATATTTACTAAGATGAAATTTGGTAT
TCGTGCAGAACAACGTGGTGCGAAACACGGACTTTACGATGCCGGTTCCTTAAACACCAACGTGTTATTTAGCGATCTTG
ACCCTAACATGTTCACCGTAACCTCCGGCTTCTTTGATGGCCGTGGTAATGTGCCGACAAGTTGGGCGATTGCCGATGGT
AATTATTTATATGCTAATCGCTCAGCTATTGAAGCTATGTATAACGCCGATGAGCAAGCCCTTGCCATGTATACCAACTA
TGACATCACCGAAAAGTCATATGCTGCATATATTCAAAGTGATTTTGAAACCGAGTTATGGGGTAAGCAAGTTGATGGTC
AAATCGGCCTTCGCTATGAGAAAGCCGATGCAGATATGGATTTCTGGGAACGCAAAAAATATGCTGCAGAGGATGTTGTT
GATGACATTCGATACTATCTCGTTCATGACACAGATACCAATGGAAGTGCGGAGTTATTACCAAGCTTAATGGTACGCTT
CTGGTTAACTGACGACTTGGTTGCACGTTTTGCCTACACTGAAACGATTCGTCGTCCCGCCTTTGGCGATTTAACCACTG
CGATTTCTTATACAGAGGACTTAACAAAGCTTGGGTTCGGTCAAGCTTCAAGTGGTAACTCTAAGTTAGAACCTACTACT
TCACAAAACTATGATTTCTCATTGGAATATTACTTTGGTGAAGGATCTTCCATATTCGGTACTTATTTCCGTCGTGATAT
TGAAGGTTTCGTATTTAACTCTTCTTCTACTATTACCCGTGAAGTTGACGGCGAAACCAAAAAATATATTTTAAGCCGTC
CAGAAAACGCTTCAAACGGAAAGCTGACAGGATTTGAGCTAGGTACTGTATATTTCCCAGAGAATATGCCTAGTTACTTA
GATGGCTTAGGTACTCAAGTCAGTGCAACCTTCTTAGATTCAAGCCAAGACATTCCTGAGTTTGACTCTGAGAGTGGTGA
GCAAATTGGTACTACAACTCGTGAACTATTCGGTGTGTCTGATACTTCTATGAGTGCGGTATTGATTTACGATAAAGACG
ATTACAGCGCGCGTTTATCATACACTTGGCGTGATAAATTCTTAAGTGCGTATGATGCAGGTAGCTTTGCAATGCCACGC
GGTATTTACCGTAAACCTGAGCAGTCACTTGACTTCCAGTTCAGCTACAACATCAGTGATGAGTTTGTATTAACCTTCGA
TGCGACAAATATTCTTGATGATATCTATCAAGAATACTACGAGGACTCAGTACTCTATAACCGTACGAACAGTATCTATA
CTCGTACTTTTGCATTGGGTGCGCGTTACTCCTTCTAA

Upstream 100 bases:

>100_bases
GGGGATGTCCGTGACTCTGAAGTGGAATAAAAAAGACCGGGACGTCAGATGGTGTCTTAGGCTACCGGGTCAAATAATAA
AACTACCGGAGATTAACTAG

Downstream 100 bases:

>100_bases
TTGACCACTGTTGTTTAAACCGAAAAAGCTAATCCTGTGGATTAGCTTTTTTATGCTTTTAATTTAAATGCATAGCAAAA
GCCTTAGCCGTGCTTACGTA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Subfamily; Nb-Dependent Receptor; NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily Protein; Outer Membrane Insertion C-Terminal Signal; NB Dependent Receptor-Related Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Receptor-Like Protein; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; NB-Dependent Receptor Protein; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; Peptidase; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase

Number of amino acids: Translated: 945; Mature: 945

Protein sequence:

>945_residues
MFKQTYLASAILLALASQATYAAEAEATQSPQTEETSRPSSGGKAQNNEEMEIIQVQGIRGSLNKAVELKRQNIQVVDAI
IAEDIGKFPDNNVVEALQRVTGVQVTDRASGEANTVSIRGLTDVTTTVNGRQVFTAAGREVAIADVPAALLGSVEVFKTR
SSSQVASGIAGQIDIRTHRPFDFQEEKISVAAKGIYSDQPDTIDPNFSALISDRWDTSIGEVGALVNVSYIRTNYNDQVV
APGASMPYYAETGVQIPDTYWKRGLAHGLDTSEGALINGQEYLLMRDAVFQNMNNGERERPALNLSLQWAPTDTSEYLFE
AFYNGYRNDNFNSMLFSNVDSSANWSQVIQDGIEVYDGTNVVKSRTAYNVDGFSSSDHSHNKTDSYVFALGGKWDFDNLT
LKSEVVYQTSTYESQFLAMRGVSANSTKTFYGVDVDYNNKSGGVPSWVYLDNPDTDINESDLTQYALWQTAQLYDSGAKD
EGDSVTWTFDGDYFLDYGIFTKMKFGIRAEQRGAKHGLYDAGSLNTNVLFSDLDPNMFTVTSGFFDGRGNVPTSWAIADG
NYLYANRSAIEAMYNADEQALAMYTNYDITEKSYAAYIQSDFETELWGKQVDGQIGLRYEKADADMDFWERKKYAAEDVV
DDIRYYLVHDTDTNGSAELLPSLMVRFWLTDDLVARFAYTETIRRPAFGDLTTAISYTEDLTKLGFGQASSGNSKLEPTT
SQNYDFSLEYYFGEGSSIFGTYFRRDIEGFVFNSSSTITREVDGETKKYILSRPENASNGKLTGFELGTVYFPENMPSYL
DGLGTQVSATFLDSSQDIPEFDSESGEQIGTTTRELFGVSDTSMSAVLIYDKDDYSARLSYTWRDKFLSAYDAGSFAMPR
GIYRKPEQSLDFQFSYNISDEFVLTFDATNILDDIYQEYYEDSVLYNRTNSIYTRTFALGARYSF

Sequences:

>Translated_945_residues
MFKQTYLASAILLALASQATYAAEAEATQSPQTEETSRPSSGGKAQNNEEMEIIQVQGIRGSLNKAVELKRQNIQVVDAI
IAEDIGKFPDNNVVEALQRVTGVQVTDRASGEANTVSIRGLTDVTTTVNGRQVFTAAGREVAIADVPAALLGSVEVFKTR
SSSQVASGIAGQIDIRTHRPFDFQEEKISVAAKGIYSDQPDTIDPNFSALISDRWDTSIGEVGALVNVSYIRTNYNDQVV
APGASMPYYAETGVQIPDTYWKRGLAHGLDTSEGALINGQEYLLMRDAVFQNMNNGERERPALNLSLQWAPTDTSEYLFE
AFYNGYRNDNFNSMLFSNVDSSANWSQVIQDGIEVYDGTNVVKSRTAYNVDGFSSSDHSHNKTDSYVFALGGKWDFDNLT
LKSEVVYQTSTYESQFLAMRGVSANSTKTFYGVDVDYNNKSGGVPSWVYLDNPDTDINESDLTQYALWQTAQLYDSGAKD
EGDSVTWTFDGDYFLDYGIFTKMKFGIRAEQRGAKHGLYDAGSLNTNVLFSDLDPNMFTVTSGFFDGRGNVPTSWAIADG
NYLYANRSAIEAMYNADEQALAMYTNYDITEKSYAAYIQSDFETELWGKQVDGQIGLRYEKADADMDFWERKKYAAEDVV
DDIRYYLVHDTDTNGSAELLPSLMVRFWLTDDLVARFAYTETIRRPAFGDLTTAISYTEDLTKLGFGQASSGNSKLEPTT
SQNYDFSLEYYFGEGSSIFGTYFRRDIEGFVFNSSSTITREVDGETKKYILSRPENASNGKLTGFELGTVYFPENMPSYL
DGLGTQVSATFLDSSQDIPEFDSESGEQIGTTTRELFGVSDTSMSAVLIYDKDDYSARLSYTWRDKFLSAYDAGSFAMPR
GIYRKPEQSLDFQFSYNISDEFVLTFDATNILDDIYQEYYEDSVLYNRTNSIYTRTFALGARYSF
>Mature_945_residues
MFKQTYLASAILLALASQATYAAEAEATQSPQTEETSRPSSGGKAQNNEEMEIIQVQGIRGSLNKAVELKRQNIQVVDAI
IAEDIGKFPDNNVVEALQRVTGVQVTDRASGEANTVSIRGLTDVTTTVNGRQVFTAAGREVAIADVPAALLGSVEVFKTR
SSSQVASGIAGQIDIRTHRPFDFQEEKISVAAKGIYSDQPDTIDPNFSALISDRWDTSIGEVGALVNVSYIRTNYNDQVV
APGASMPYYAETGVQIPDTYWKRGLAHGLDTSEGALINGQEYLLMRDAVFQNMNNGERERPALNLSLQWAPTDTSEYLFE
AFYNGYRNDNFNSMLFSNVDSSANWSQVIQDGIEVYDGTNVVKSRTAYNVDGFSSSDHSHNKTDSYVFALGGKWDFDNLT
LKSEVVYQTSTYESQFLAMRGVSANSTKTFYGVDVDYNNKSGGVPSWVYLDNPDTDINESDLTQYALWQTAQLYDSGAKD
EGDSVTWTFDGDYFLDYGIFTKMKFGIRAEQRGAKHGLYDAGSLNTNVLFSDLDPNMFTVTSGFFDGRGNVPTSWAIADG
NYLYANRSAIEAMYNADEQALAMYTNYDITEKSYAAYIQSDFETELWGKQVDGQIGLRYEKADADMDFWERKKYAAEDVV
DDIRYYLVHDTDTNGSAELLPSLMVRFWLTDDLVARFAYTETIRRPAFGDLTTAISYTEDLTKLGFGQASSGNSKLEPTT
SQNYDFSLEYYFGEGSSIFGTYFRRDIEGFVFNSSSTITREVDGETKKYILSRPENASNGKLTGFELGTVYFPENMPSYL
DGLGTQVSATFLDSSQDIPEFDSESGEQIGTTTRELFGVSDTSMSAVLIYDKDDYSARLSYTWRDKFLSAYDAGSFAMPR
GIYRKPEQSLDFQFSYNISDEFVLTFDATNILDDIYQEYYEDSVLYNRTNSIYTRTFALGARYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 105451; Mature: 105451

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKQTYLASAILLALASQATYAAEAEATQSPQTEETSRPSSGGKAQNNEEMEIIQVQGIR
CCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
GSLNKAVELKRQNIQVVDAIIAEDIGKFPDNNVVEALQRVTGVQVTDRASGEANTVSIRG
CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCCCCCEEEEEE
LTDVTTTVNGRQVFTAAGREVAIADVPAALLGSVEVFKTRSSSQVASGIAGQIDIRTHRP
CEEEEEECCCCEEEEECCCEEEEECCCHHHHCCCCEEECCCCHHHHCCCCCEEEEEECCC
FDFQEEKISVAAKGIYSDQPDTIDPNFSALISDRWDTSIGEVGALVNVSYIRTNYNDQVV
CCCCHHHHEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCEEEEEEEEECCCCEEE
APGASMPYYAETGVQIPDTYWKRGLAHGLDTSEGALINGQEYLLMRDAVFQNMNNGERER
ECCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCEEEEEHHHHHHCCCCCCCCC
PALNLSLQWAPTDTSEYLFEAFYNGYRNDNFNSMLFSNVDSSANWSQVIQDGIEVYDGTN
CEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHEECCCC
VVKSRTAYNVDGFSSSDHSHNKTDSYVFALGGKWDFDNLTLKSEVVYQTSTYESQFLAMR
HHHCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCHHHHEEE
GVSANSTKTFYGVDVDYNNKSGGVPSWVYLDNPDTDINESDLTQYALWQTAQLYDSGAKD
CCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EGDSVTWTFDGDYFLDYGIFTKMKFGIRAEQRGAKHGLYDAGSLNTNVLFSDLDPNMFTV
CCCEEEEEECCCEEEECCHHEEEEECCCHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEE
TSGFFDGRGNVPTSWAIADGNYLYANRSAIEAMYNADEQALAMYTNYDITEKSYAAYIQS
ECCEECCCCCCCCEEEEECCCEEEECHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHC
DFETELWGKQVDGQIGLRYEKADADMDFWERKKYAAEDVVDDIRYYLVHDTDTNGSAELL
CCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHH
PSLMVRFWLTDDLVARFAYTETIRRPAFGDLTTAISYTEDLTKLGFGQASSGNSKLEPTT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SQNYDFSLEYYFGEGSSIFGTYFRRDIEGFVFNSSSTITREVDGETKKYILSRPENASNG
CCCCCEEEEEEECCCCCHHHHHHHHCCCEEEECCCCCEEEECCCCCHHHEEECCCCCCCC
KLTGFELGTVYFPENMPSYLDGLGTQVSATFLDSSQDIPEFDSESGEQIGTTTRELFGVS
CEEEEEEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCHHHHHCCC
DTSMSAVLIYDKDDYSARLSYTWRDKFLSAYDAGSFAMPRGIYRKPEQSLDFQFSYNISD
CCCCEEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
EFVLTFDATNILDDIYQEYYEDSVLYNRTNSIYTRTFALGARYSF
CEEEEEEHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MFKQTYLASAILLALASQATYAAEAEATQSPQTEETSRPSSGGKAQNNEEMEIIQVQGIR
CCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
GSLNKAVELKRQNIQVVDAIIAEDIGKFPDNNVVEALQRVTGVQVTDRASGEANTVSIRG
CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCCCCCEEEEEE
LTDVTTTVNGRQVFTAAGREVAIADVPAALLGSVEVFKTRSSSQVASGIAGQIDIRTHRP
CEEEEEECCCCEEEEECCCEEEEECCCHHHHCCCCEEECCCCHHHHCCCCCEEEEEECCC
FDFQEEKISVAAKGIYSDQPDTIDPNFSALISDRWDTSIGEVGALVNVSYIRTNYNDQVV
CCCCHHHHEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCEEEEEEEEECCCCEEE
APGASMPYYAETGVQIPDTYWKRGLAHGLDTSEGALINGQEYLLMRDAVFQNMNNGERER
ECCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCEEEEEHHHHHHCCCCCCCCC
PALNLSLQWAPTDTSEYLFEAFYNGYRNDNFNSMLFSNVDSSANWSQVIQDGIEVYDGTN
CEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHEECCCC
VVKSRTAYNVDGFSSSDHSHNKTDSYVFALGGKWDFDNLTLKSEVVYQTSTYESQFLAMR
HHHCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCHHHHEEE
GVSANSTKTFYGVDVDYNNKSGGVPSWVYLDNPDTDINESDLTQYALWQTAQLYDSGAKD
CCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EGDSVTWTFDGDYFLDYGIFTKMKFGIRAEQRGAKHGLYDAGSLNTNVLFSDLDPNMFTV
CCCEEEEEECCCEEEECCHHEEEEECCCHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEE
TSGFFDGRGNVPTSWAIADGNYLYANRSAIEAMYNADEQALAMYTNYDITEKSYAAYIQS
ECCEECCCCCCCCEEEEECCCEEEECHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHC
DFETELWGKQVDGQIGLRYEKADADMDFWERKKYAAEDVVDDIRYYLVHDTDTNGSAELL
CCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHH
PSLMVRFWLTDDLVARFAYTETIRRPAFGDLTTAISYTEDLTKLGFGQASSGNSKLEPTT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SQNYDFSLEYYFGEGSSIFGTYFRRDIEGFVFNSSSTITREVDGETKKYILSRPENASNG
CCCCCEEEEEEECCCCCHHHHHHHHCCCEEEECCCCCEEEECCCCCHHHEEECCCCCCCC
KLTGFELGTVYFPENMPSYLDGLGTQVSATFLDSSQDIPEFDSESGEQIGTTTRELFGVS
CEEEEEEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCHHHHHCCC
DTSMSAVLIYDKDDYSARLSYTWRDKFLSAYDAGSFAMPRGIYRKPEQSLDFQFSYNISD
CCCCEEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
EFVLTFDATNILDDIYQEYYEDSVLYNRTNSIYTRTFALGARYSF
CEEEEEEHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA