| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920475
Identifier: 117920475
GI number: 117920475
Start: 2428148
End: 2429917
Strand: Direct
Name: 117920475
Synonym: Shewana3_2030
Alternate gene names: NA
Gene position: 2428148-2429917 (Clockwise)
Preceding gene: 117920474
Following gene: 117920476
Centisome position: 48.83
GC content: 38.36
Gene sequence:
>1770_bases ATGAGCATTGCTATTGGAGAGGTAATATCAGTCAAAGGAATTAACATCGTTGTTGAGCTGTACGAAGAATCCAATAAAGA AACGCTGTTTTATAAAGGAGAGCGTTTCAACGGAGTTTCGATACAAGAGCACATCCTTATTCGGCGCGGCTTCAAAGATA TTGTTGCTATCGTGCAAGGCGAATATTTAGACGAAAAAATGCCAACTGAAAACGGTCGAACTTTTGTCAGGAAAATCGAA TTAAAACCAATTGGTTACTTTCAGGAAAATCAATTCTACGAAGGTATTAAATACCTCCCCATGATCCGAGATCTTGCTTA CTTGATGAGTGATAAGCAGGTGCGGCAAGTTTATGGTGAGGGGGATGATGATTTTGTTGTCGGTGAAATTCTTAAAGAAG AATTATCAGTTTCACTGCCGTGGGCAAGCTTGTTCAACACTCATATCGGTGTATTTGGGAACACAGGCAGTGGTAAATCT AATACTTTGACAACGCTCTACACGAAGTTATTCTCCCAAAAGTTGAAGCAAATAAATGGCAAAAGCCATTTTGTTGTTAT CGATTTTAACGGTGAATATACTGCTGGCCAGCTATGCACTGATCCAAAGTTCAAAAAAGTTTATGATTTAGATACCCGAA AAGATGGACAAAGCAAATTTCCGCTGAGCGAGGCAGTCTTCTGGGATGAAGAGATTTTCGGCATTTTGTTCAAGGCGACT GAAAATACTCAGAAACCGTTTTTGAAGAGAATTATTACTGGTCGAGAGCGTTTTAAGGAGTTTCCCAATAGCCTTGAAAA CTACACTAAAAAAATACTGGTTAAAGCATTAACGAGTACATCGCCAAAAAAGGAATTTGCAGAGCTCATAGTCGAAATTG CAGATATTGTTCATGCTGATGAATTGAAACAAAAAACCCTGCAGTTAAGCTGGCATAGCAAAAGCGTTAATTTTTATTTT CTAAATACTGGTACACATCTGAATGGCGGTTCAGATGATTTCGGCTACAAGAATTATTTTGAAGAAAGCATAAATCAATT AAAAATAGGCAATTTGTCTCATTTCGAAGAGCTCAAGCTGCGCGTTAATCTTCAGTTATTGTCCGATTTAGTTAATGGTT TTGTTCAATTCGACCATATCCAACCGTTACTAAAAAGAATTGAGTCTTCGTTAACGTCTTTACAGCGTGTAATAGAGATA GGTGAAAATCCAAAGCTCCACCTATTGACGGTTGTTTCACTGAGAAAATCTAATCAAGAAATAAAAAAAATAATTCCACT ACTTTTAGCTAAATACTATTACGACAGTCATAAAGTTACTGTTATCAATGACAGCCCTCCGAAAAAGACTTTTCACATGA TTATCGATGAAGCGCATAACATACTGTCTATGCAGTCAAACAGGGAAAGTGAAAGCTGGAAAGATTATCGGCTGGAGTTG TTTGAAGAGATCATCAAAGAAGGCAGAAAATTTGGTTTTTACTTAACACTGTCTAGCCAGCGGCCCGCTGATATTTCGTC AACGATAATGTCTCAAATTCACAATTTTTTTATTCATCGACTGGTTAATGATAGAGATTTGCTGTTGCTTGAAAATTCGA TCAGCACTTTGGATGCCCTCTCACGCTCGATGATACCTAACCTTGCAAGAGGCTGTGCGGTCGTGACTGGGACGTCGTTT GATATTCCAATGATTGTGCAATTTAAAGCGCTCTCGAAAGAGGCTCAACCAGATAGTGGTGACGTCGACCTAACAAAATT ATGGGGGTAA
Upstream 100 bases:
>100_bases TAAAGGCTATCCAAATGTCAAATACCTCACTATTGATGATGAACTAACATTCAAACGCTTTAATAAACGAGTGTTCACTT TGGCTAAGGATGGCGATTAG
Downstream 100 bases:
>100_bases CGATTAACTAACATCCTGTCGATCAACGAAAAGTATCTACATGCCTTAAGCCTCACGAGTGACTGGCGAACCGTTTCTAA GTGGGCCTGCAAGGTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MSIAIGEVISVKGINIVVELYEESNKETLFYKGERFNGVSIQEHILIRRGFKDIVAIVQGEYLDEKMPTENGRTFVRKIE LKPIGYFQENQFYEGIKYLPMIRDLAYLMSDKQVRQVYGEGDDDFVVGEILKEELSVSLPWASLFNTHIGVFGNTGSGKS NTLTTLYTKLFSQKLKQINGKSHFVVIDFNGEYTAGQLCTDPKFKKVYDLDTRKDGQSKFPLSEAVFWDEEIFGILFKAT ENTQKPFLKRIITGRERFKEFPNSLENYTKKILVKALTSTSPKKEFAELIVEIADIVHADELKQKTLQLSWHSKSVNFYF LNTGTHLNGGSDDFGYKNYFEESINQLKIGNLSHFEELKLRVNLQLLSDLVNGFVQFDHIQPLLKRIESSLTSLQRVIEI GENPKLHLLTVVSLRKSNQEIKKIIPLLLAKYYYDSHKVTVINDSPPKKTFHMIIDEAHNILSMQSNRESESWKDYRLEL FEEIIKEGRKFGFYLTLSSQRPADISSTIMSQIHNFFIHRLVNDRDLLLLENSISTLDALSRSMIPNLARGCAVVTGTSF DIPMIVQFKALSKEAQPDSGDVDLTKLWG
Sequences:
>Translated_589_residues MSIAIGEVISVKGINIVVELYEESNKETLFYKGERFNGVSIQEHILIRRGFKDIVAIVQGEYLDEKMPTENGRTFVRKIE LKPIGYFQENQFYEGIKYLPMIRDLAYLMSDKQVRQVYGEGDDDFVVGEILKEELSVSLPWASLFNTHIGVFGNTGSGKS NTLTTLYTKLFSQKLKQINGKSHFVVIDFNGEYTAGQLCTDPKFKKVYDLDTRKDGQSKFPLSEAVFWDEEIFGILFKAT ENTQKPFLKRIITGRERFKEFPNSLENYTKKILVKALTSTSPKKEFAELIVEIADIVHADELKQKTLQLSWHSKSVNFYF LNTGTHLNGGSDDFGYKNYFEESINQLKIGNLSHFEELKLRVNLQLLSDLVNGFVQFDHIQPLLKRIESSLTSLQRVIEI GENPKLHLLTVVSLRKSNQEIKKIIPLLLAKYYYDSHKVTVINDSPPKKTFHMIIDEAHNILSMQSNRESESWKDYRLEL FEEIIKEGRKFGFYLTLSSQRPADISSTIMSQIHNFFIHRLVNDRDLLLLENSISTLDALSRSMIPNLARGCAVVTGTSF DIPMIVQFKALSKEAQPDSGDVDLTKLWG >Mature_588_residues SIAIGEVISVKGINIVVELYEESNKETLFYKGERFNGVSIQEHILIRRGFKDIVAIVQGEYLDEKMPTENGRTFVRKIEL KPIGYFQENQFYEGIKYLPMIRDLAYLMSDKQVRQVYGEGDDDFVVGEILKEELSVSLPWASLFNTHIGVFGNTGSGKSN TLTTLYTKLFSQKLKQINGKSHFVVIDFNGEYTAGQLCTDPKFKKVYDLDTRKDGQSKFPLSEAVFWDEEIFGILFKATE NTQKPFLKRIITGRERFKEFPNSLENYTKKILVKALTSTSPKKEFAELIVEIADIVHADELKQKTLQLSWHSKSVNFYFL NTGTHLNGGSDDFGYKNYFEESINQLKIGNLSHFEELKLRVNLQLLSDLVNGFVQFDHIQPLLKRIESSLTSLQRVIEIG ENPKLHLLTVVSLRKSNQEIKKIIPLLLAKYYYDSHKVTVINDSPPKKTFHMIIDEAHNILSMQSNRESESWKDYRLELF EEIIKEGRKFGFYLTLSSQRPADISSTIMSQIHNFFIHRLVNDRDLLLLENSISTLDALSRSMIPNLARGCAVVTGTSFD IPMIVQFKALSKEAQPDSGDVDLTKLWG
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1429 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 67517; Mature: 67386
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAIGEVISVKGINIVVELYEESNKETLFYKGERFNGVSIQEHILIRRGFKDIVAIVQG CCEECCCEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHC EYLDEKMPTENGRTFVRKIELKPIGYFQENQFYEGIKYLPMIRDLAYLMSDKQVRQVYGE CHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC GDDDFVVGEILKEELSVSLPWASLFNTHIGVFGNTGSGKSNTLTTLYTKLFSQKLKQING CCCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC KSHFVVIDFNGEYTAGQLCTDPKFKKVYDLDTRKDGQSKFPLSEAVFWDEEIFGILFKAT CCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEECC ENTQKPFLKRIITGRERFKEFPNSLENYTKKILVKALTSTSPKKEFAELIVEIADIVHAD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ELKQKTLQLSWHSKSVNFYFLNTGTHLNGGSDDFGYKNYFEESINQLKIGNLSHFEELKL HHHHHHEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEECCCCCHHHHHHH RVNLQLLSDLVNGFVQFDHIQPLLKRIESSLTSLQRVIEIGENPKLHLLTVVSLRKSNQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCHHH IKKIIPLLLAKYYYDSHKVTVINDSPPKKTFHMIIDEAHNILSMQSNRESESWKDYRLEL HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FEEIIKEGRKFGFYLTLSSQRPADISSTIMSQIHNFFIHRLVNDRDLLLLENSISTLDAL HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH SRSMIPNLARGCAVVTGTSFDIPMIVQFKALSKEAQPDSGDVDLTKLWG HHHHHHHHHCCCEEEECCCCCCCCEEEEEHHCCCCCCCCCCEEEHCCCC >Mature Secondary Structure SIAIGEVISVKGINIVVELYEESNKETLFYKGERFNGVSIQEHILIRRGFKDIVAIVQG CEECCCEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHC EYLDEKMPTENGRTFVRKIELKPIGYFQENQFYEGIKYLPMIRDLAYLMSDKQVRQVYGE CHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC GDDDFVVGEILKEELSVSLPWASLFNTHIGVFGNTGSGKSNTLTTLYTKLFSQKLKQING CCCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC KSHFVVIDFNGEYTAGQLCTDPKFKKVYDLDTRKDGQSKFPLSEAVFWDEEIFGILFKAT CCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEECC ENTQKPFLKRIITGRERFKEFPNSLENYTKKILVKALTSTSPKKEFAELIVEIADIVHAD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ELKQKTLQLSWHSKSVNFYFLNTGTHLNGGSDDFGYKNYFEESINQLKIGNLSHFEELKL HHHHHHEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEECCCCCHHHHHHH RVNLQLLSDLVNGFVQFDHIQPLLKRIESSLTSLQRVIEIGENPKLHLLTVVSLRKSNQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCHHH IKKIIPLLLAKYYYDSHKVTVINDSPPKKTFHMIIDEAHNILSMQSNRESESWKDYRLEL HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FEEIIKEGRKFGFYLTLSSQRPADISSTIMSQIHNFFIHRLVNDRDLLLLENSISTLDAL HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH SRSMIPNLARGCAVVTGTSFDIPMIVQFKALSKEAQPDSGDVDLTKLWG HHHHHHHHHCCCEEEECCCCCCCCEEEEEHHCCCCCCCCCCEEEHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]