| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920440
Identifier: 117920440
GI number: 117920440
Start: 2377883
End: 2379940
Strand: Reverse
Name: 117920440
Synonym: Shewana3_1995
Alternate gene names: NA
Gene position: 2379940-2377883 (Counterclockwise)
Preceding gene: 117920441
Following gene: 117920435
Centisome position: 47.86
GC content: 49.13
Gene sequence:
>2058_bases ATGAGCAAGGCCACCTTTGATCCAACACTTTATAATAAAAGTAATAACGAACCTTTTAATCAAGTGTTGGATAAACATTT ATCCCGTCGTAATTTTGTTAAAAGTGGATTAGGCCTAGGTGCGATGACCGCCTTTGCAGGCATGGGATTAGTCGGTTGTG GTTCGGACAATTCCCCTGCCCCTACACCTATTGATCCCGTTCCGCCATTACCACCGACTCAAAGTAGCGCCAAATTAAGC TTCACATCAGTCGCCGGCTCCCGCCTGGATGCGGTTGTGGTACCCGAGGGTTACAGCGCGCAAGTACTTGCCCCTTGGGG AACACCACTAAATGCTAAGGCCGCACCTTGGAAAGCCGATGGCAGCAATACCGCCGATGACCAAGCAAACTCTGTCGGTA TGCATCATGATGGTATGCATTTCTTCCCATTGAATGATGCCGGCGATGACGGTTTACTCTGTATCAACCATGAATATATC GACGAGATAGCCCTGCATCCTAATGGCCCAACCGTAGATGAAACCACTGGATTACGTACCATCATCGATGAAATCCGTAA GGAAATTAACGCCCACGGCGTGTCGGTAGTAAGAATTAAACTCGTTAATAATCAATGGGAAGTTGTTTACAACGACAGTC ATAACCGCCGCTTTACCGGCGCAACTGTGATGGATATCGCCGGGCCTCTCGCCTATTCGCCACTACTCGAAACCCGTTAC TCACCCGATGGCAGCCAGGCTCGTGGCACCTTAAATAACTGTGGTAATGGTTACACGCCTTGGGGCACCTATTTGACCTG CGAAGAAAACTGGCCGGGTTACTTTGCCAACCGCGGCACTTTAGCCGCCGATCAAGCCCGTATCGGGATCAGCAAAAGCA GCACCCGCTATGGCTGGGATGACTTAGCGGGTCACGCCGAGGAGCGTCTCGATGAGTTCGCGCGTTTTGATGTCACGCCA AAGGGCAATAGTGCACAAGATGATTACCGCAACGAGGCTAATGGCCACGGCTATATCGTTGAAATTGACCCCTATAATCC AAGCTCACGCGCCATCAAACGCACTGCCCTTGGTCGCTTCCGCCACGAGGGATGTACCTTCGGAAAATTAACCGAAGGTA AACCTGTGGTGTTCTACTCTGGCCACGATTCTCAATTCGAATACTTATATAAATTTGTGTCGAATGCGCTGTGGGACCCA CAGGATGCAAACAGCACAAATCGCCTGCAAATGGGTGATAAGTATATGAATGAAGGAACATTGTATGCCGCTAAGTTTAA CGAAAATGGCGCTGGTATATGGTTGCCTTTAATCTTAGACAGCCAAACGACAGACGGTAAAACCTTAGGTGATAGCTTTG CCAGTCTGGCCGAGATTATCTTAAATACTGCAGGTGCGGCGGATTTAGTCGGCGCAACGCCTATGGACCGCCCTGAGTGG TGTGCGGTTGACCCCTTCACAGGTTCAGCCTACTTAACACTGACCAATAACTCTAAGCGTACCGAGGCAAACCCAGCTAA TCCAAGACTTAAAAACTCCTTTGGACATATTATTCGTTGGGATGAAGGTGACAAAGACACTGAATTCACATGGGATATTT TTGTCTTTGGCTCACCGAGTGATGGCAATGCCGAGACCAACCTGTCGGGCTTAACGGATCTAAACCAATTTGCTAGCCCC GATGGATTGGCCTTCGACGCCCGCGGTATTTTATGGGTGCAAACCGATAATGGTGCCAAAGAAGTCGCCGAAGAAACCAA TGATCAAATGCTAGCGATTGTGCCATCAACCTTAGTCGACAGCGCAAACAAGCAAGCCAGCGTCACGGCCGAAAACCAAA TGGAATTAAAGCGTTTCTTTGTTGGGCCAAATGATTGCGAAGTCACAGGTTTTGCTATTAGCCCAGATTACACTTCGGTT TTTGCCAACATTCAGCATCCAGGTAACTGGCCCTATTCGAATAATGCCGCCGAAATAACGCCTGCTGGTACCGTACTGCG ACCACGTGCGGCAACTGTGGTGATCCGTAAACTCGATGGTAAAGAAGTGGCGGTCTAA
Upstream 100 bases:
>100_bases ATATTGCAGTATTACTGTCATATAAACTCAGCTTTAGTGTCATATTGCTACTTTAGGCTTAGCTTCGAAATTTAATTCTT CGAACTAGCTGGAGTGAAAT
Downstream 100 bases:
>100_bases TCAGTCACCCAACCTAAACCCGATAAAAATCCCCGCCATGCGGGGATTTTTTATTCACTGACTGCACCACCACCGAGGGC TCGATACAGGGCGATTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 685; Mature: 684
Protein sequence:
>685_residues MSKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLGAMTAFAGMGLVGCGSDNSPAPTPIDPVPPLPPTQSSAKLS FTSVAGSRLDAVVVPEGYSAQVLAPWGTPLNAKAAPWKADGSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYI DEIALHPNGPTVDETTGLRTIIDEIRKEINAHGVSVVRIKLVNNQWEVVYNDSHNRRFTGATVMDIAGPLAYSPLLETRY SPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGTLAADQARIGISKSSTRYGWDDLAGHAEERLDEFARFDVTP KGNSAQDDYRNEANGHGYIVEIDPYNPSSRAIKRTALGRFRHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSNALWDP QDANSTNRLQMGDKYMNEGTLYAAKFNENGAGIWLPLILDSQTTDGKTLGDSFASLAEIILNTAGAADLVGATPMDRPEW CAVDPFTGSAYLTLTNNSKRTEANPANPRLKNSFGHIIRWDEGDKDTEFTWDIFVFGSPSDGNAETNLSGLTDLNQFASP DGLAFDARGILWVQTDNGAKEVAEETNDQMLAIVPSTLVDSANKQASVTAENQMELKRFFVGPNDCEVTGFAISPDYTSV FANIQHPGNWPYSNNAAEITPAGTVLRPRAATVVIRKLDGKEVAV
Sequences:
>Translated_685_residues MSKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLGAMTAFAGMGLVGCGSDNSPAPTPIDPVPPLPPTQSSAKLS FTSVAGSRLDAVVVPEGYSAQVLAPWGTPLNAKAAPWKADGSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYI DEIALHPNGPTVDETTGLRTIIDEIRKEINAHGVSVVRIKLVNNQWEVVYNDSHNRRFTGATVMDIAGPLAYSPLLETRY SPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGTLAADQARIGISKSSTRYGWDDLAGHAEERLDEFARFDVTP KGNSAQDDYRNEANGHGYIVEIDPYNPSSRAIKRTALGRFRHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSNALWDP QDANSTNRLQMGDKYMNEGTLYAAKFNENGAGIWLPLILDSQTTDGKTLGDSFASLAEIILNTAGAADLVGATPMDRPEW CAVDPFTGSAYLTLTNNSKRTEANPANPRLKNSFGHIIRWDEGDKDTEFTWDIFVFGSPSDGNAETNLSGLTDLNQFASP DGLAFDARGILWVQTDNGAKEVAEETNDQMLAIVPSTLVDSANKQASVTAENQMELKRFFVGPNDCEVTGFAISPDYTSV FANIQHPGNWPYSNNAAEITPAGTVLRPRAATVVIRKLDGKEVAV >Mature_684_residues SKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLGAMTAFAGMGLVGCGSDNSPAPTPIDPVPPLPPTQSSAKLSF TSVAGSRLDAVVVPEGYSAQVLAPWGTPLNAKAAPWKADGSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYID EIALHPNGPTVDETTGLRTIIDEIRKEINAHGVSVVRIKLVNNQWEVVYNDSHNRRFTGATVMDIAGPLAYSPLLETRYS PDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGTLAADQARIGISKSSTRYGWDDLAGHAEERLDEFARFDVTPK GNSAQDDYRNEANGHGYIVEIDPYNPSSRAIKRTALGRFRHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSNALWDPQ DANSTNRLQMGDKYMNEGTLYAAKFNENGAGIWLPLILDSQTTDGKTLGDSFASLAEIILNTAGAADLVGATPMDRPEWC AVDPFTGSAYLTLTNNSKRTEANPANPRLKNSFGHIIRWDEGDKDTEFTWDIFVFGSPSDGNAETNLSGLTDLNQFASPD GLAFDARGILWVQTDNGAKEVAEETNDQMLAIVPSTLVDSANKQASVTAENQMELKRFFVGPNDCEVTGFAISPDYTSVF ANIQHPGNWPYSNNAAEITPAGTVLRPRAATVVIRKLDGKEVAV
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74465; Mature: 74334
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLGAMTAFAGMGLVGCGSDNSPA CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCCC PTPIDPVPPLPPTQSSAKLSFTSVAGSRLDAVVVPEGYSAQVLAPWGTPLNAKAAPWKAD CCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCC GSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYIDEIALHPNGPTVDETTGLRT CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHEEECCCCCCCCCCCCHHH IIDEIRKEINAHGVSVVRIKLVNNQWEVVYNDSHNRRFTGATVMDIAGPLAYSPLLETRY HHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCEECCCCHHHHCCCHHHCHHHHHCC SPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGTLAADQARIGISKSSTRYGWD CCCCHHCCCCHHHCCCCCCCCCCEEEECCCCCCEECCCCCEECCCCEECCCCCCCCCCCH DLAGHAEERLDEFARFDVTPKGNSAQDDYRNEANGHGYIVEIDPYNPSSRAIKRTALGRF HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSNALWDPQDANSTNRLQMGDKYMNEGT HHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCCCCE LYAAKFNENGAGIWLPLILDSQTTDGKTLGDSFASLAEIILNTAGAADLVGATPMDRPEW EEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCE CAVDPFTGSAYLTLTNNSKRTEANPANPRLKNSFGHIIRWDEGDKDTEFTWDIFVFGSPS EEECCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCEEEEEEEEEECCC DGNAETNLSGLTDLNQFASPDGLAFDARGILWVQTDNGAKEVAEETNDQMLAIVPSTLVD CCCCCCCCCCCHHHHHHCCCCCCEEECCEEEEEECCCCHHHHHHHCCCCEEEEECHHHHC SANKQASVTAENQMELKRFFVGPNDCEVTGFAISPDYTSVFANIQHPGNWPYSNNAAEIT CCCCCEEEECHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEC PAGTVLRPRAATVVIRKLDGKEVAV CCCCEECCCCEEEEEEECCCCCCCC >Mature Secondary Structure SKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLGAMTAFAGMGLVGCGSDNSPA CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCCC PTPIDPVPPLPPTQSSAKLSFTSVAGSRLDAVVVPEGYSAQVLAPWGTPLNAKAAPWKAD CCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCC GSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYIDEIALHPNGPTVDETTGLRT CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHEEECCCCCCCCCCCCHHH IIDEIRKEINAHGVSVVRIKLVNNQWEVVYNDSHNRRFTGATVMDIAGPLAYSPLLETRY HHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCEECCCCHHHHCCCHHHCHHHHHCC SPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGTLAADQARIGISKSSTRYGWD CCCCHHCCCCHHHCCCCCCCCCCEEEECCCCCCEECCCCCEECCCCEECCCCCCCCCCCH DLAGHAEERLDEFARFDVTPKGNSAQDDYRNEANGHGYIVEIDPYNPSSRAIKRTALGRF HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSNALWDPQDANSTNRLQMGDKYMNEGT HHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCCCCE LYAAKFNENGAGIWLPLILDSQTTDGKTLGDSFASLAEIILNTAGAADLVGATPMDRPEW EEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCE CAVDPFTGSAYLTLTNNSKRTEANPANPRLKNSFGHIIRWDEGDKDTEFTWDIFVFGSPS EEECCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCEEEEEEEEEECCC DGNAETNLSGLTDLNQFASPDGLAFDARGILWVQTDNGAKEVAEETNDQMLAIVPSTLVD CCCCCCCCCCCHHHHHHCCCCCCEEECCEEEEEECCCCHHHHHHHCCCCEEEEECHHHHC SANKQASVTAENQMELKRFFVGPNDCEVTGFAISPDYTSVFANIQHPGNWPYSNNAAEIT CCCCCEEEECHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEC PAGTVLRPRAATVVIRKLDGKEVAV CCCCEECCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA