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The map label for this gene is rimK [H]

Identifier: 117920394

GI number: 117920394

Start: 2318340

End: 2319161

Strand: Reverse

Name: rimK [H]

Synonym: Shewana3_1949

Alternate gene names: 117920394

Gene position: 2319161-2318340 (Counterclockwise)

Preceding gene: 117920395

Following gene: 117920393

Centisome position: 46.64

GC content: 51.22

Gene sequence:

>822_bases
ATGCTAAAGCAGTTGATCGCTATCGCCGTTGCCAGCAGCTTAATGGGATGCGCAGCGACAGAACCGACCGCCCACGCCCC
CAAACCACTCGATACTGATACCTTTAATACCCGTCTTAATCAGCAGCAAGATCAATTAGTCGCTGCGATTAATCAGCAAT
GCCAGCCTGCGGATTTAACCTCGCTTGCGACACTCAACAGCCAAGTCGAGCAGCTCAGTCTGCAAATCAATCACTTAAAT
CAAGCGGCGAAAAACCTCACCGCACAAAAGCAAGCCGCGGTGGTGACGTCTGCGCCGAGCCAATGCCCCAAATCCGCCCT
TGGGGATAAGTTTTTACTCGGTGAAATCGAAAATGTGTTTATCGATGAACTCAATGCCAGTTTTGCCACCCGCATTGATA
CGGGCGCAGAGTCCTCCTCCATCGATGCCCGTAATATCACGCTGTTTGAGCGCGATGGTGCCCAATGGGTACGCTTTGAT
GTGTATACTCAAGGGGAAAAACAGCCCGCGACGAATTTCGAATCTAAGGTCGTGCGTTTTGTGCGCATTAAGCAGGACGC
CAATGAAAAGGACGATCGCCGCCCCGTGATCCACGCGCACCTTAAGATTGGCCAATATTCCGCAGAGACAGATCTTAACC
TCACCGACCGTAGTCACCTCGACTATCCCTTATTGCTCGGCCGTAAATTTATCAAAGATATCGCCGTTGTCGATGTCGGC
CAGCGCTATGTGCACGGTAAAGCCAAACCGCCCAAACCCAAACAACCCGATCCTGAACAACCTAAAGCAGAGTCAGCTAT
CGTCTCCAGCGGCAAAAAATAA

Upstream 100 bases:

>100_bases
ATCAAGATTTGACCTAACGAGTTAGCTCCAGTGGCCTAATACGCTTATGCCTAGGTAAACCCTAGGCATAAAACCCGTTT
TAACGCCAATAGGAAGTACT

Downstream 100 bases:

>100_bases
CCGCTTGAGCCAAGCCGTTTTACAAGCTGAGCATAAGAGCCGCTTGCGCTTATTGGTCTGTCAGCTTGTGATATCGCCGC
TCAACCTGACGCAGCCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLKQLIAIAVASSLMGCAATEPTAHAPKPLDTDTFNTRLNQQQDQLVAAINQQCQPADLTSLATLNSQVEQLSLQINHLN
QAAKNLTAQKQAAVVTSAPSQCPKSALGDKFLLGEIENVFIDELNASFATRIDTGAESSSIDARNITLFERDGAQWVRFD
VYTQGEKQPATNFESKVVRFVRIKQDANEKDDRRPVIHAHLKIGQYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVG
QRYVHGKAKPPKPKQPDPEQPKAESAIVSSGKK

Sequences:

>Translated_273_residues
MLKQLIAIAVASSLMGCAATEPTAHAPKPLDTDTFNTRLNQQQDQLVAAINQQCQPADLTSLATLNSQVEQLSLQINHLN
QAAKNLTAQKQAAVVTSAPSQCPKSALGDKFLLGEIENVFIDELNASFATRIDTGAESSSIDARNITLFERDGAQWVRFD
VYTQGEKQPATNFESKVVRFVRIKQDANEKDDRRPVIHAHLKIGQYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVG
QRYVHGKAKPPKPKQPDPEQPKAESAIVSSGKK
>Mature_273_residues
MLKQLIAIAVASSLMGCAATEPTAHAPKPLDTDTFNTRLNQQQDQLVAAINQQCQPADLTSLATLNSQVEQLSLQINHLN
QAAKNLTAQKQAAVVTSAPSQCPKSALGDKFLLGEIENVFIDELNASFATRIDTGAESSSIDARNITLFERDGAQWVRFD
VYTQGEKQPATNFESKVVRFVRIKQDANEKDDRRPVIHAHLKIGQYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVG
QRYVHGKAKPPKPKQPDPEQPKAESAIVSSGKK

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 29994; Mature: 29994

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQLIAIAVASSLMGCAATEPTAHAPKPLDTDTFNTRLNQQQDQLVAAINQQCQPADLT
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCHH
SLATLNSQVEQLSLQINHLNQAAKNLTAQKQAAVVTSAPSQCPKSALGDKFLLGEIENVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHCCCEEHHHHHHHHH
IDELNASFATRIDTGAESSSIDARNITLFERDGAQWVRFDVYTQGEKQPATNFESKVVRF
HHHHCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHH
VRIKQDANEKDDRRPVIHAHLKIGQYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVG
HHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
QRYVHGKAKPPKPKQPDPEQPKAESAIVSSGKK
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MLKQLIAIAVASSLMGCAATEPTAHAPKPLDTDTFNTRLNQQQDQLVAAINQQCQPADLT
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCHH
SLATLNSQVEQLSLQINHLNQAAKNLTAQKQAAVVTSAPSQCPKSALGDKFLLGEIENVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHCCCEEHHHHHHHHH
IDELNASFATRIDTGAESSSIDARNITLFERDGAQWVRFDVYTQGEKQPATNFESKVVRF
HHHHCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHH
VRIKQDANEKDDRRPVIHAHLKIGQYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVG
HHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
QRYVHGKAKPPKPKQPDPEQPKAESAIVSSGKK
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA