Click here to switch to the map view.

The map label for this gene is yegM [C]

Identifier: 117920361

GI number: 117920361

Start: 2275127

End: 2276239

Strand: Direct

Name: yegM [C]

Synonym: Shewana3_1916

Alternate gene names: 117920361

Gene position: 2275127-2276239 (Clockwise)

Preceding gene: 117920360

Following gene: 117920362

Centisome position: 45.76

GC content: 52.02

Gene sequence:

>1113_bases
GTGGTGAACAGAGTAAAACCAATCAAAATCGGAACGGGTTTGTGTTGTGCGGGCATTGTATTAGTGCTCGCAGGCTGTGG
CAGCAGTGAAGACCAAACCCTCACAACCTCAAAACGTCCGTTAGTACAAGTGATGGAACTACCCGCACCTGTCACGGATA
AAGGTTACAAGTTTAGCGGCGTGTTGGAGTCGGAGAATCGTGCGGATTTGTCCTTCCGAGTCCAAGGCGTACTCGCTGAA
TTGTTGGCCGAAGAAGGAGTTGAGGTTACCAAGGGACAAGTGATTGCAAGGCTCGATCCCCATGATTTTCAAGTCAGTGT
TCTGGAGCTGACGGCTAAGTTGGATGAGGCGAAAACCGCCCATCAATTGGCAAAAATTGAACTGCAAAGGGTTAAAAGTG
CGATTAATGATCGCGCGATTGCCAGCGTGAAGTTAGACCGTGCCGTGGCCGCCGAAGCGCGCGCGAAAGCGGGCGTCGAA
TTAGTCAGCCAGTCGCTGAAAAAAGCCCAGGACGCGCTGCGTTACACTGAGCTGACCTCGCCCTATGACGGCGTGGTGGG
TAAAACCTTTGTCGATCAGCATGAACAAGTCAATGTTGGCACCAAAATCCTAACCATTCATCGCCCCGAACGACTCAATG
CGGTAGTGGATGTTCCCGAGAGCCAGATCTGGAACCTAAAACTTGGCACCGAAGGCCAAGTGACTTGGTTTGAGGGTACT
GAAGCTGTACCTGCAGTGGTTGCCAAAATCGCGTCAGTGCCCGATCGCCTAAAGCGCACCTATGAGGTGACCTTTAACCT
AGCGCATGTTCCAAAACAGTTAGTCGCGGGCAAGGCGGTGAGTGTGGACGTCGCTCTACCTTATGCCAGTGATAAACCTA
TCTATTGTATTCCTGCCATGGCGGTTACGAGCCGCGAGAGTCAACTTTATGTCAATCGCGTCATTGCCGAGCATGTGAGT
GCGACTCCCGTGGAATCAGTGAGTCAGACCGACGATTCTTTATGCGTGACTGGCGGCTTAACCTCTGGTGAGTCAATCGT
GATTGCAGGCGGCGCTTTTGTCGAAGAAGGCCAAGCCGTCACCATTTTGCATGGGGCGTCGGTTAAATCATGA

Upstream 100 bases:

>100_bases
TTGTCACAAAATTCGTGACATTGATGTACCTTTTTTGATTATTGTCCAATAAATTCACCTCCTTTACTCTGTGCCGCCTT
AGTCCTAGTTACAGGAAATT

Downstream 100 bases:

>100_bases
GTCTTTCAACCTTTGCGCTAAGGCAAAAAACCTTCGTTATTTTCTTCACTGTGCTGTCGATCATCGCGGGGATTTATTCC
TACTTCGACTTAGGCAAGCT

Product: putative efflux protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein; RND Efflux Membrane Fusion Protein; Efflux Protein; HlyD Family Secretion Protein; Multidrug Resistance Protein; RND Family Mulitdrug Efflux Protein; Auxiliary Transport Protein MFP Family; Periplasmic Linker Protein; Acriflavin Resistance Periplasmic Protein; Transport/Efflux Transmembrane Protein; Component Of Multidrug Efflux System; Cation/Multidrug Efflux System Mebrane-Fusion Component; Efflux Transporter; RND Efflux System Membrane Fusion Protein; Multidrug Efflux Transporter Protein; Protein Secretion Protein; Acriflavin Resistance Protein E; Lipoprotein; RND Multidrug Efflux Membrane Fusion Protein MexE; Component Of Multidrug Efflux Protein; Multidrug Efflux; Linker Protein; RND Membrane Fusion Protein; HlyD Family Protein Secretion Protein; Efflux System Protein; Multidrug ABC Transporter; Efflux Transmembrane Protein; HlyD-Family Secretion Protein; RND Family Resistance-Nodulation- Efflux Pump; Cation Efflux System Protein; Membrane Fusion Protein; Multidrug Efflux Protein; AcrA/E Family Efflux Transporter MFP Subunit; Secretion Protein HlyD Family; Secretion Protein; RND Efflux Transporter; RND Superfamily Transport Protein Membrane-Fusion Protein; Periplasmic Multidrug Efflux Lipoprotein; Organic Solvent Efflux Pump; RND Superfamily Transporter Membrane- Fusion Protein; RND Family Efflux Transporter; Periplasmic Linker Protein Multidrug Resistance Protein; Rnd Efflux Membrane Fusion Protein

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MVNRVKPIKIGTGLCCAGIVLVLAGCGSSEDQTLTTSKRPLVQVMELPAPVTDKGYKFSGVLESENRADLSFRVQGVLAE
LLAEEGVEVTKGQVIARLDPHDFQVSVLELTAKLDEAKTAHQLAKIELQRVKSAINDRAIASVKLDRAVAAEARAKAGVE
LVSQSLKKAQDALRYTELTSPYDGVVGKTFVDQHEQVNVGTKILTIHRPERLNAVVDVPESQIWNLKLGTEGQVTWFEGT
EAVPAVVAKIASVPDRLKRTYEVTFNLAHVPKQLVAGKAVSVDVALPYASDKPIYCIPAMAVTSRESQLYVNRVIAEHVS
ATPVESVSQTDDSLCVTGGLTSGESIVIAGGAFVEEGQAVTILHGASVKS

Sequences:

>Translated_370_residues
MVNRVKPIKIGTGLCCAGIVLVLAGCGSSEDQTLTTSKRPLVQVMELPAPVTDKGYKFSGVLESENRADLSFRVQGVLAE
LLAEEGVEVTKGQVIARLDPHDFQVSVLELTAKLDEAKTAHQLAKIELQRVKSAINDRAIASVKLDRAVAAEARAKAGVE
LVSQSLKKAQDALRYTELTSPYDGVVGKTFVDQHEQVNVGTKILTIHRPERLNAVVDVPESQIWNLKLGTEGQVTWFEGT
EAVPAVVAKIASVPDRLKRTYEVTFNLAHVPKQLVAGKAVSVDVALPYASDKPIYCIPAMAVTSRESQLYVNRVIAEHVS
ATPVESVSQTDDSLCVTGGLTSGESIVIAGGAFVEEGQAVTILHGASVKS
>Mature_370_residues
MVNRVKPIKIGTGLCCAGIVLVLAGCGSSEDQTLTTSKRPLVQVMELPAPVTDKGYKFSGVLESENRADLSFRVQGVLAE
LLAEEGVEVTKGQVIARLDPHDFQVSVLELTAKLDEAKTAHQLAKIELQRVKSAINDRAIASVKLDRAVAAEARAKAGVE
LVSQSLKKAQDALRYTELTSPYDGVVGKTFVDQHEQVNVGTKILTIHRPERLNAVVDVPESQIWNLKLGTEGQVTWFEGT
EAVPAVVAKIASVPDRLKRTYEVTFNLAHVPKQLVAGKAVSVDVALPYASDKPIYCIPAMAVTSRESQLYVNRVIAEHVS
ATPVESVSQTDDSLCVTGGLTSGESIVIAGGAFVEEGQAVTILHGASVKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082036, Length=166, Percent_Identity=27.710843373494, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39558; Mature: 39558

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRVKPIKIGTGLCCAGIVLVLAGCGSSEDQTLTTSKRPLVQVMELPAPVTDKGYKFSG
CCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHCCCCCCCCCEEEEE
VLESENRADLSFRVQGVLAELLAEEGVEVTKGQVIARLDPHDFQVSVLELTAKLDEAKTA
EECCCCCCCEEEHHHHHHHHHHHHCCCEECCCCEEEEECCCCCEEEHHHHHHHHHHHHHH
HQLAKIELQRVKSAINDRAIASVKLDRAVAAEARAKAGVELVSQSLKKAQDALRYTELTS
HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PYDGVVGKTFVDQHEQVNVGTKILTIHRPERLNAVVDVPESQIWNLKLGTEGQVTWFEGT
CCCCCCCCHHHCCCCEECCCEEEEEEECCHHCCCEEECCCCCEEEEEECCCCCEEEECCC
EAVPAVVAKIASVPDRLKRTYEVTFNLAHVPKQLVAGKAVSVDVALPYASDKPIYCIPAM
CHHHHHHHHHHHCHHHHHHEEEEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECC
AVTSRESQLYVNRVIAEHVSATPVESVSQTDDSLCVTGGLTSGESIVIAGGAFVEEGQAV
EECCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCEEEEECCCEEECCCEE
TILHGASVKS
EEEECCCCCC
>Mature Secondary Structure
MVNRVKPIKIGTGLCCAGIVLVLAGCGSSEDQTLTTSKRPLVQVMELPAPVTDKGYKFSG
CCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHCCCCCCCCCEEEEE
VLESENRADLSFRVQGVLAELLAEEGVEVTKGQVIARLDPHDFQVSVLELTAKLDEAKTA
EECCCCCCCEEEHHHHHHHHHHHHCCCEECCCCEEEEECCCCCEEEHHHHHHHHHHHHHH
HQLAKIELQRVKSAINDRAIASVKLDRAVAAEARAKAGVELVSQSLKKAQDALRYTELTS
HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PYDGVVGKTFVDQHEQVNVGTKILTIHRPERLNAVVDVPESQIWNLKLGTEGQVTWFEGT
CCCCCCCCHHHCCCCEECCCEEEEEEECCHHCCCEEECCCCCEEEEEECCCCCEEEECCC
EAVPAVVAKIASVPDRLKRTYEVTFNLAHVPKQLVAGKAVSVDVALPYASDKPIYCIPAM
CHHHHHHHHHHHCHHHHHHEEEEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECC
AVTSRESQLYVNRVIAEHVSATPVESVSQTDDSLCVTGGLTSGESIVIAGGAFVEEGQAV
EECCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCEEEEECCCEEECCCEE
TILHGASVKS
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA