| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is opgH [H]
Identifier: 117920333
GI number: 117920333
Start: 2236415
End: 2238598
Strand: Direct
Name: opgH [H]
Synonym: Shewana3_1888
Alternate gene names: 117920333
Gene position: 2236415-2238598 (Clockwise)
Preceding gene: 117920332
Following gene: 117920334
Centisome position: 44.98
GC content: 51.37
Gene sequence:
>2184_bases ATGACTGTATCCGAGAATTCGGTTCTTGAGACTGAAGTGCTCGTGGGTGGTAGCGCCATGCCTAATGAAAGGCCTGGCGC AATGGAACCCCAAAGCTTAAGCCAAATGCCTGAAGGATTTCCGCGTCGTAGCACCGTTGCCAATGGTGTACGTTCTAAGG TATCCCGTCGATTCTTTGTCGTGGGCGGAGCTCTGGCGCTGTCTGCTTTTGCTATCTACGAAATGGGCGCTGTATTCAGT ATCGGAGGGATCACTCCCCTCGAATATCTGATGTTGGCGCTGTTTGCGATTAATTTCTGCTGGATTGCCTTGGCGTTTTG TAGTGGTATCGCAGGCTTCTTCATGTTGCTGAAAAAGCCCAAGCCAAACGAGCTTGAACAGACTGAGCTACATACCCGCA CCGCGATTTTGATGCCAACCTATAACGAGTCGCCTGATCGGGTGTTCTCCGCGGTATCAGTGATGGCGGAAGCCTTATCC CAAACGGGGCATGGCCATGCATTCGATTGGTTTATCTTAAGTGATACCACAGATCCTGAAATCGCCCTGTTAGAAGAACA GGCGTTTTTAGTGCTACGCCAAGAAACCCATAAACATTCTCGCGTGTATTACCGCCGCCGTCGTAAGAACGTGGCGCGTA AAGCGGGTAACGTGGCGGATTTCTGCCGCCGATGGGGCTCTCGCTACGATCACTTATTGGTGCTGGACGCTGACAGTTTG ATGGAGTCATCGACCATCACTGGCTTAGCACAACGTATGCAGGCCGATCCTGACGCCGGACTTATCCAGACGATTCCATC GCTCATCAATGGCACCACCTTAATGGCGCGTCTGCAGCAGTTTGCGGCGCGTATTTATGGTCCTGTGATTGGTACGGGGC TTGGTTGGTGGGTACAAAAAGAAGGTAACTTCTGGGGCCATAACGCTATTATTCGTACCGAAGCCTTTATGGGCGCAGCA GGTCTACCAAACCTTAAGGGTAAACCGCCATTTGGTGGTCATATCCTAAGCCATGACTTTGTCGAAGCGGCGCTGATTCG CCGTGCGGGCTGGAGTGTGGTCATTGCCTACGACTTACCCGGCTCTTATGAAGAATGTCCGCCATCTATTGTCGATTTAG CCGTGCGCGATCGCCGTTGGTGTCAAGGTAACTTACAGCATTCCCGTATTCTGCCAACTAAAGGTTTGCACTGGGTCAGC CGTTTGCACTTAATGACGGGCATTATGGCGTATCTGTCATCGCCATTCTGGTTGTTATTGATTCTGACTGGTTTGATGCT CGCGTTGCAGGCACACTTTATTCGTCCTGAGTATTTTACCGACCAATTCTCGCTGTTCCCGACATGGCCAATCATGGACT CGGATAGGGCATTAAGATTGTTCTATATCACTATGGGCGTGTTGTTTGGACCTAAGATTTTCGGCGTATTATTGCTGCTA AAAGATGGAAATTTTGCCCGCAGTGTCGGTGGTCGCATCAAGGCGATTTTGAGCGTGATCTTTGAGGTGATCCTCTCTGC GCTAATCGCACCTATCATGATGTTTATCCACTGCGGTGCGGTGATGTCGATTCTGATGGGGCGTGACAGTGGCTGGTCTC CACAGCGCCGTGACGATGGCAGCATGCCTTGGTTAACCCTGATCTATCGCCACCGCTGGCATATGCTGGCGGGCGTGATG TTAGGTTATGCGGCGATTTTGGACTCCTTAACATTGCTTGCGTGGATGAGCCCCGCCTTGATTGGTCTGTGGTTAGCCGT GCCGATTTCGGCGTGGACGGGGTCAATCAAAATTGGTGAGTTCTTTAAACGCATTGGCATTTTGGCCACGCCAGAGGAGC GTAATCCTGCGCCTATCTGTATTCGTGCTCAAGAGGCACGTGCCGCTTATCAGGCGCATATCGAGCAGCCTTGGACATTA GCGCAAGTGTTAAAAGATCCAGCGTTAATGGAACTGCATTTAGCTATGGTTGATAAGCAGCCACTGCGTGCGGCGGGTAC ACCCATTGAACCGGTTGAAGCTATTGTGCACGTAAAAGTGCATGAAGCGCAGTGCCAACAGAGTGCCTTGGCGTTATTTA ACCGTCAGGAGATGGCGCTGGTGCTAGCCAATCCGCTGATGCTGCGAAGCTTGCAAAAGCTGCCAGAGCAGTTTGTGCCA GAAGACTTGGTCTCTTTCTGCTAG
Upstream 100 bases:
>100_bases TTATCGAATTACGTGCCGAACTCAAGTTCTCAACACCGCGTCAGGTTGAAACCTGGCTCTATCGCTGGACGCTTTAAGGT CCATGACGGAGCGACATAAT
Downstream 100 bases:
>100_bases GTAACACGTTTTTAGGGTAATAATTCACCTCGCTTAATGGGCTTAATTGTTGTCAAATAATTGAAATGCCACTGACGTCT GTCAGTGGCATTTTTGTTTT
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MTVSENSVLETEVLVGGSAMPNERPGAMEPQSLSQMPEGFPRRSTVANGVRSKVSRRFFVVGGALALSAFAIYEMGAVFS IGGITPLEYLMLALFAINFCWIALAFCSGIAGFFMLLKKPKPNELEQTELHTRTAILMPTYNESPDRVFSAVSVMAEALS QTGHGHAFDWFILSDTTDPEIALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSL MESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQKEGNFWGHNAIIRTEAFMGAA GLPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLPGSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVS RLHLMTGIMAYLSSPFWLLLILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLL KDGNFARSVGGRIKAILSVIFEVILSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDGSMPWLTLIYRHRWHMLAGVM LGYAAILDSLTLLAWMSPALIGLWLAVPISAWTGSIKIGEFFKRIGILATPEERNPAPICIRAQEARAAYQAHIEQPWTL AQVLKDPALMELHLAMVDKQPLRAAGTPIEPVEAIVHVKVHEAQCQQSALALFNRQEMALVLANPLMLRSLQKLPEQFVP EDLVSFC
Sequences:
>Translated_727_residues MTVSENSVLETEVLVGGSAMPNERPGAMEPQSLSQMPEGFPRRSTVANGVRSKVSRRFFVVGGALALSAFAIYEMGAVFS IGGITPLEYLMLALFAINFCWIALAFCSGIAGFFMLLKKPKPNELEQTELHTRTAILMPTYNESPDRVFSAVSVMAEALS QTGHGHAFDWFILSDTTDPEIALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSL MESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQKEGNFWGHNAIIRTEAFMGAA GLPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLPGSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVS RLHLMTGIMAYLSSPFWLLLILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLL KDGNFARSVGGRIKAILSVIFEVILSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDGSMPWLTLIYRHRWHMLAGVM LGYAAILDSLTLLAWMSPALIGLWLAVPISAWTGSIKIGEFFKRIGILATPEERNPAPICIRAQEARAAYQAHIEQPWTL AQVLKDPALMELHLAMVDKQPLRAAGTPIEPVEAIVHVKVHEAQCQQSALALFNRQEMALVLANPLMLRSLQKLPEQFVP EDLVSFC >Mature_726_residues TVSENSVLETEVLVGGSAMPNERPGAMEPQSLSQMPEGFPRRSTVANGVRSKVSRRFFVVGGALALSAFAIYEMGAVFSI GGITPLEYLMLALFAINFCWIALAFCSGIAGFFMLLKKPKPNELEQTELHTRTAILMPTYNESPDRVFSAVSVMAEALSQ TGHGHAFDWFILSDTTDPEIALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSLM ESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQKEGNFWGHNAIIRTEAFMGAAG LPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLPGSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVSR LHLMTGIMAYLSSPFWLLLILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLLK DGNFARSVGGRIKAILSVIFEVILSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDGSMPWLTLIYRHRWHMLAGVML GYAAILDSLTLLAWMSPALIGLWLAVPISAWTGSIKIGEFFKRIGILATPEERNPAPICIRAQEARAAYQAHIEQPWTLA QVLKDPALMELHLAMVDKQPLRAAGTPIEPVEAIVHVKVHEAQCQQSALALFNRQEMALVLANPLMLRSLQKLPEQFVPE DLVSFC
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=542, Percent_Identity=40.2214022140221, Blast_Score=407, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 80964; Mature: 80833
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSENSVLETEVLVGGSAMPNERPGAMEPQSLSQMPEGFPRRSTVANGVRSKVSRRFFV CCCCCCCCEEHHEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCEEEE VGGALALSAFAIYEMGAVFSIGGITPLEYLMLALFAINFCWIALAFCSGIAGFFMLLKKP ECHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KPNELEQTELHTRTAILMPTYNESPDRVFSAVSVMAEALSQTGHGHAFDWFILSDTTDPE CCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC IALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEHHHH MESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE EGNFWGHNAIIRTEAFMGAAGLPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLP CCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC GSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVSRLHLMTGIMAYLSSPFWLLL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH ILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEE KDGNFARSVGGRIKAILSVIFEVILSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDG ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SMPWLTLIYRHRWHMLAGVMLGYAAILDSLTLLAWMSPALIGLWLAVPISAWTGSIKIGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH FFKRIGILATPEERNPAPICIRAQEARAAYQAHIEQPWTLAQVLKDPALMELHLAMVDKQ HHHHCCCEECCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCC PLRAAGTPIEPVEAIVHVKVHEAQCQQSALALFNRQEMALVLANPLMLRSLQKLPEQFVP CHHHCCCCCCHHHHHHEEEEHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHCCC EDLVSFC HHHHHCC >Mature Secondary Structure TVSENSVLETEVLVGGSAMPNERPGAMEPQSLSQMPEGFPRRSTVANGVRSKVSRRFFV CCCCCCCEEHHEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCEEEE VGGALALSAFAIYEMGAVFSIGGITPLEYLMLALFAINFCWIALAFCSGIAGFFMLLKKP ECHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KPNELEQTELHTRTAILMPTYNESPDRVFSAVSVMAEALSQTGHGHAFDWFILSDTTDPE CCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC IALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEHHHH MESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE EGNFWGHNAIIRTEAFMGAAGLPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLP CCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC GSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVSRLHLMTGIMAYLSSPFWLLL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH ILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEE KDGNFARSVGGRIKAILSVIFEVILSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDG ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SMPWLTLIYRHRWHMLAGVMLGYAAILDSLTLLAWMSPALIGLWLAVPISAWTGSIKIGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH FFKRIGILATPEERNPAPICIRAQEARAAYQAHIEQPWTLAQVLKDPALMELHLAMVDKQ HHHHCCCEECCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCC PLRAAGTPIEPVEAIVHVKVHEAQCQQSALALFNRQEMALVLANPLMLRSLQKLPEQFVP CHHHCCCCCCHHHHHHEEEEHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHCCC EDLVSFC HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA