| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yeiG [H]
Identifier: 117920285
GI number: 117920285
Start: 2179947
End: 2180786
Strand: Direct
Name: yeiG [H]
Synonym: Shewana3_1838
Alternate gene names: 117920285
Gene position: 2179947-2180786 (Clockwise)
Preceding gene: 117920284
Following gene: 117920286
Centisome position: 43.84
GC content: 49.52
Gene sequence:
>840_bases ATGACCATAGAAAATATCAGCTGTAACAAGAGCTTTGGTGGTTGGCACAAACAGTATCGCCATCAATCTCAGGCGCTGAA TTGCGAGATGCGCTTTGCGATTTACCTGCCTCCGGAGGCGGCCAACAAACCTGTGCCTGTGTTGTATTGGCTATCGGGTC TCACCTGTACCGACGAAAACTTTATGCAGAAGGCGGGCGCGCAGCGTATTGCGGCTCAATTGGGGATAGCCATCGTTGCC CCCGATACCAGCCCGCGTGGTGATGATGTTGCCGATGCACCGGATAAAGCCTATGACTTAGGCTTAGGCGCGGGGTTTTA TTTGAACGCGACCAGAGCGCCTTGGAATCGTCACTATAAAATGTACGACTATATAGTGCATGAATTGCCTGCGCTGATCG AAGCCAATTTCCCCGTGACAGATCAACGCGCTATCTCTGGCCATTCGATGGGCGGGCATGGCGCGTTAGTGATAGGGTTA ACCAATCCCCACAGATACAGTTCAATCTCGGCCTTTAGTCCTATCAGTAATCCAAGCAACGCGCCTTGGGGGATTAAAGC TTTTACCGAGTATTTGGGCGAGAATCGCGAGCACTGGCGCCAATACGATGCCTGTGAGTTACTCAAATTGGCGATTAACG AAGTGCCCGTATTAGTCGACCAAGGTGACGCCGACAGCTTTTTAGAGGCGCAACTGATGCCGCAAACGCTCAGTGATATT GCCAAAGCAAAAGGTTACCCCTTAGATTTGCGTATGCAGGCGGGATACGACCATAGCTATTATTTTATTGCGAGCTTTAT CGAAGAGCACCTTAAATTCCATAGCTTGTATTTTAAATAA
Upstream 100 bases:
>100_bases ATAACCGCTAACGGCTTATCTGCTGCTTATGCGTTTTAAGCTTGTGATAGGGCCTTGAACGGCAAGCTAAACGCTAAAAG TGAACAGGAAAGGGATTGAC
Downstream 100 bases:
>100_bases GGCTGCCTAGCGTTAACCCCCAAGCATTAAACCCTAGAGTTAAACTTTAGGGTTTAATATAAAAAGCGCAGTGAACATTA AGTTCACCGCGCTTTTTATT
Product: putative esterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTIENISCNKSFGGWHKQYRHQSQALNCEMRFAIYLPPEAANKPVPVLYWLSGLTCTDENFMQKAGAQRIAAQLGIAIVA PDTSPRGDDVADAPDKAYDLGLGAGFYLNATRAPWNRHYKMYDYIVHELPALIEANFPVTDQRAISGHSMGGHGALVIGL TNPHRYSSISAFSPISNPSNAPWGIKAFTEYLGENREHWRQYDACELLKLAINEVPVLVDQGDADSFLEAQLMPQTLSDI AKAKGYPLDLRMQAGYDHSYYFIASFIEEHLKFHSLYFK
Sequences:
>Translated_279_residues MTIENISCNKSFGGWHKQYRHQSQALNCEMRFAIYLPPEAANKPVPVLYWLSGLTCTDENFMQKAGAQRIAAQLGIAIVA PDTSPRGDDVADAPDKAYDLGLGAGFYLNATRAPWNRHYKMYDYIVHELPALIEANFPVTDQRAISGHSMGGHGALVIGL TNPHRYSSISAFSPISNPSNAPWGIKAFTEYLGENREHWRQYDACELLKLAINEVPVLVDQGDADSFLEAQLMPQTLSDI AKAKGYPLDLRMQAGYDHSYYFIASFIEEHLKFHSLYFK >Mature_278_residues TIENISCNKSFGGWHKQYRHQSQALNCEMRFAIYLPPEAANKPVPVLYWLSGLTCTDENFMQKAGAQRIAAQLGIAIVAP DTSPRGDDVADAPDKAYDLGLGAGFYLNATRAPWNRHYKMYDYIVHELPALIEANFPVTDQRAISGHSMGGHGALVIGLT NPHRYSSISAFSPISNPSNAPWGIKAFTEYLGENREHWRQYDACELLKLAINEVPVLVDQGDADSFLEAQLMPQTLSDIA KAKGYPLDLRMQAGYDHSYYFIASFIEEHLKFHSLYFK
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=281, Percent_Identity=50.5338078291815, Blast_Score=305, Evalue=2e-83, Organism=Escherichia coli, GI1788477, Length=278, Percent_Identity=58.273381294964, Blast_Score=344, Evalue=3e-96, Organism=Escherichia coli, GI1786551, Length=273, Percent_Identity=55.3113553113553, Blast_Score=317, Evalue=4e-88, Organism=Caenorhabditis elegans, GI17510185, Length=279, Percent_Identity=49.1039426523297, Blast_Score=262, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6322393, Length=283, Percent_Identity=44.5229681978799, Blast_Score=236, Evalue=4e-63, Organism=Drosophila melanogaster, GI45551932, Length=280, Percent_Identity=48.9285714285714, Blast_Score=278, Evalue=2e-75, Organism=Drosophila melanogaster, GI24648347, Length=280, Percent_Identity=48.9285714285714, Blast_Score=278, Evalue=3e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31252; Mature: 31120
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIENISCNKSFGGWHKQYRHQSQALNCEMRFAIYLPPEAANKPVPVLYWLSGLTCTDEN CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEEEEECCCEECCHH FMQKAGAQRIAAQLGIAIVAPDTSPRGDDVADAPDKAYDLGLGAGFYLNATRAPWNRHYK HHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCHHHHHH MYDYIVHELPALIEANFPVTDQRAISGHSMGGHGALVIGLTNPHRYSSISAFSPISNPSN HHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC APWGIKAFTEYLGENREHWRQYDACELLKLAINEVPVLVDQGDADSFLEAQLMPQTLSDI CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCHHHHHHH AKAKGYPLDLRMQAGYDHSYYFIASFIEEHLKFHSLYFK HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIENISCNKSFGGWHKQYRHQSQALNCEMRFAIYLPPEAANKPVPVLYWLSGLTCTDEN CCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEEEEECCCEECCHH FMQKAGAQRIAAQLGIAIVAPDTSPRGDDVADAPDKAYDLGLGAGFYLNATRAPWNRHYK HHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCHHHHHH MYDYIVHELPALIEANFPVTDQRAISGHSMGGHGALVIGLTNPHRYSSISAFSPISNPSN HHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC APWGIKAFTEYLGENREHWRQYDACELLKLAINEVPVLVDQGDADSFLEAQLMPQTLSDI CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCHHHHHHH AKAKGYPLDLRMQAGYDHSYYFIASFIEEHLKFHSLYFK HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA