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The map label for this gene is yfjZ [H]

Identifier: 117920249

GI number: 117920249

Start: 2129045

End: 2129401

Strand: Reverse

Name: yfjZ [H]

Synonym: Shewana3_1802

Alternate gene names: 117920249

Gene position: 2129401-2129045 (Counterclockwise)

Preceding gene: 117920250

Following gene: 117920248

Centisome position: 42.83

GC content: 47.62

Gene sequence:

>357_bases
ATGACAACCCTAAAACTTTTCAATATTGAGCACGCTTGGGGGTTGCCCCGTAAAGTGTCTCCCCGCTTTGGTGCAAGGCT
AATTTTACGCGGTCTGCACTTGGATTATCTCCATGACCGCGCAAGCTTTGTCGGTGAATTTCCACCAGCAATTAAACAAC
AATTTGTCGAGGCCTTTCCAGCTATGGTTAAACAGCTTGAGCGGCTGGTAGCCACCGGCGAGATTGATGCTACTGAGCAG
CACTGCGTAAGCATTGAACACGCTGGCTTTACCTGTGAAGCCGACACACTTGGCAGTCACGGTTATTTGTATCTTGCGAT
TTATCAAACCGAAGCTAAACCAAAACTAAGTCACTGA

Upstream 100 bases:

>100_bases
TCATCACCCACTCCACTAGTCGGCAGTATTAACCGCTCTTACTAGTCCGCTAACCAGCAAGCCACTACCTGAGTTTTATC
CTTCAACCATTGAGGTCACT

Downstream 100 bases:

>100_bases
CCACCAGCAACTTCGCCCTGACTCAATAACCCATTCATTATCGTAAGCCAGTACTCATCCGTTAAACATAACCACCAAAC
TTTAATCTCCCAGCTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTTLKLFNIEHAWGLPRKVSPRFGARLILRGLHLDYLHDRASFVGEFPPAIKQQFVEAFPAMVKQLERLVATGEIDATEQ
HCVSIEHAGFTCEADTLGSHGYLYLAIYQTEAKPKLSH

Sequences:

>Translated_118_residues
MTTLKLFNIEHAWGLPRKVSPRFGARLILRGLHLDYLHDRASFVGEFPPAIKQQFVEAFPAMVKQLERLVATGEIDATEQ
HCVSIEHAGFTCEADTLGSHGYLYLAIYQTEAKPKLSH
>Mature_117_residues
TTLKLFNIEHAWGLPRKVSPRFGARLILRGLHLDYLHDRASFVGEFPPAIKQQFVEAFPAMVKQLERLVATGEIDATEQH
CVSIEHAGFTCEADTLGSHGYLYLAIYQTEAKPKLSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafW, yagB and yeeU [H]

Homologues:

Organism=Escherichia coli, GI1788998, Length=100, Percent_Identity=48, Blast_Score=107, Evalue=2e-25,
Organism=Escherichia coli, GI1786440, Length=98, Percent_Identity=46.9387755102041, Blast_Score=97, Evalue=2e-22,
Organism=Escherichia coli, GI1788314, Length=98, Percent_Identity=47.9591836734694, Blast_Score=96, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009320 [H]

Pfam domain/function: PF06154 YagB_YeeU_YfjZ [H]

EC number: NA

Molecular weight: Translated: 13292; Mature: 13161

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLKLFNIEHAWGLPRKVSPRFGARLILRGLHLDYLHDRASFVGEFPPAIKQQFVEAFP
CCEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AMVKQLERLVATGEIDATEQHCVSIEHAGFTCEADTLGSHGYLYLAIYQTEAKPKLSH
HHHHHHHHHHHCCCCCCCHHHHEEEECCCEEECCCCCCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
TTLKLFNIEHAWGLPRKVSPRFGARLILRGLHLDYLHDRASFVGEFPPAIKQQFVEAFP
CEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AMVKQLERLVATGEIDATEQHCVSIEHAGFTCEADTLGSHGYLYLAIYQTEAKPKLSH
HHHHHHHHHHHCCCCCCCHHHHEEEECCCEEECCCCCCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]