| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920245
Identifier: 117920245
GI number: 117920245
Start: 2126305
End: 2127027
Strand: Reverse
Name: 117920245
Synonym: Shewana3_1798
Alternate gene names: NA
Gene position: 2127027-2126305 (Counterclockwise)
Preceding gene: 117920246
Following gene: 117920244
Centisome position: 42.78
GC content: 49.93
Gene sequence:
>723_bases ATGTATAGATTTCATCCCGGTGATCACCTGGTCACCAATATCGATCCGCTTGGCTTAACCGAACACCATGGCCTGTATGT TGGCCATGGCAATGTGATTCACTTATCTAAACAGGGCATCATCGAAGAAATCGATCTGCAGCAATTTGCTGGTGGCCATA AGATCAGAGTGAAAAAGTCCAGCCTGTTTCCCCATCAAGCTATTGAGCTTGCACGCAGTCAGCTGGGTCACAGTCCATAC GACGTTGCCACCAACAATTGCGAGCACTTCGTCAACGAATGCTTAGCGGGGAGCAGCACCTCCAATCAAGTGAGTAATCT TAGCCACATTGCGCTGCAAGGCTCTGCCAGAGCAGGCTTACTGGGGAATGCTGCTTCAAAGCTGGCCACGGGAACTGTCG CAAACGTCGTGTTAGCCTCTACCGCCATCAAAATGACCGGTGAATACCTAGGGCTACCCGATAACGTCAACACGCTACTA GGGACACCTGGAGATCTTGTGGCTAAACCTGCCGAATGCCTACTAAAAGGCACCACGCAAACTCTAGGTGAAACTTATAC TTGCTTAAGCCAAGGAGAGATTACCGATGCGGGGATCAAACTCGTCACCGGCAGTGTAGAAACTGGCTTAAACACCATGT TGACGACAGCAGAAGTGGGCATCAATGGCGTAAAAGCCGGTGCAGAGCTAATAGTCGATGCATGGCATTGGTTAAGGTCA TGA
Upstream 100 bases:
>100_bases GCTGGAAATCTGAATCAATCAGCACGCCCATTTCATCCTATTCAACCCATTAGCAGATGCAACCTAGGAGTATCTGCGTT GCTTTCTTGGAGTACATACC
Downstream 100 bases:
>100_bases TGCTTCAACTGCAATATTGAGAGCACTCAGTCACCCATTACCCAAACCCTATAAACGAAGCGGCATGCCGCCGCTATCGT TTTTATCCCTCATGCGATTA
Product: retinol acyltransferase domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MYRFHPGDHLVTNIDPLGLTEHHGLYVGHGNVIHLSKQGIIEEIDLQQFAGGHKIRVKKSSLFPHQAIELARSQLGHSPY DVATNNCEHFVNECLAGSSTSNQVSNLSHIALQGSARAGLLGNAASKLATGTVANVVLASTAIKMTGEYLGLPDNVNTLL GTPGDLVAKPAECLLKGTTQTLGETYTCLSQGEITDAGIKLVTGSVETGLNTMLTTAEVGINGVKAGAELIVDAWHWLRS
Sequences:
>Translated_240_residues MYRFHPGDHLVTNIDPLGLTEHHGLYVGHGNVIHLSKQGIIEEIDLQQFAGGHKIRVKKSSLFPHQAIELARSQLGHSPY DVATNNCEHFVNECLAGSSTSNQVSNLSHIALQGSARAGLLGNAASKLATGTVANVVLASTAIKMTGEYLGLPDNVNTLL GTPGDLVAKPAECLLKGTTQTLGETYTCLSQGEITDAGIKLVTGSVETGLNTMLTTAEVGINGVKAGAELIVDAWHWLRS >Mature_240_residues MYRFHPGDHLVTNIDPLGLTEHHGLYVGHGNVIHLSKQGIIEEIDLQQFAGGHKIRVKKSSLFPHQAIELARSQLGHSPY DVATNNCEHFVNECLAGSSTSNQVSNLSHIALQGSARAGLLGNAASKLATGTVANVVLASTAIKMTGEYLGLPDNVNTLL GTPGDLVAKPAECLLKGTTQTLGETYTCLSQGEITDAGIKLVTGSVETGLNTMLTTAEVGINGVKAGAELIVDAWHWLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25326; Mature: 25326
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRFHPGDHLVTNIDPLGLTEHHGLYVGHGNVIHLSKQGIIEEIDLQQFAGGHKIRVKKS CCEECCCCCEEECCCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHCCCCEEEEECC SLFPHQAIELARSQLGHSPYDVATNNCEHFVNECLAGSSTSNQVSNLSHIALQGSARAGL CCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHEEEEECCCCCCC LGNAASKLATGTVANVVLASTAIKMTGEYLGLPDNVNTLLGTPGDLVAKPAECLLKGTTQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHCCHHHHHCCCHH TLGETYTCLSQGEITDAGIKLVTGSVETGLNTMLTTAEVGINGVKAGAELIVDAWHWLRS HHHHHHHHHCCCCCCCCCEEEEECCHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYRFHPGDHLVTNIDPLGLTEHHGLYVGHGNVIHLSKQGIIEEIDLQQFAGGHKIRVKKS CCEECCCCCEEECCCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHCCCCEEEEECC SLFPHQAIELARSQLGHSPYDVATNNCEHFVNECLAGSSTSNQVSNLSHIALQGSARAGL CCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHEEEEECCCCCCC LGNAASKLATGTVANVVLASTAIKMTGEYLGLPDNVNTLLGTPGDLVAKPAECLLKGTTQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHCCHHHHHCCCHH TLGETYTCLSQGEITDAGIKLVTGSVETGLNTMLTTAEVGINGVKAGAELIVDAWHWLRS HHHHHHHHHCCCCCCCCCEEEEECCHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA