| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920227
Identifier: 117920227
GI number: 117920227
Start: 2097681
End: 2097899
Strand: Direct
Name: 117920227
Synonym: Shewana3_1780
Alternate gene names: NA
Gene position: 2097681-2097899 (Clockwise)
Preceding gene: 117920226
Following gene: 117920228
Centisome position: 42.19
GC content: 45.21
Gene sequence:
>219_bases ATGGAATTGTATTTTAAGCTAAACCTAAGCTATCGAGAGTTTTTGCCTTACTACCAAGGCCTTGCCGATAAGGTTGAAGT GCGTGAACGTCAGGGGCGGATCCTCTGGATTAATGGCCGACATTTTAGGCGTTTTTTAACCGATAACGGCATCCATGGAC AGTTCAAACTGGTGCTCGATGATAAAGGGCAATTTGTGTCGCTGGAGCAGTTAGCCTAA
Upstream 100 bases:
>100_bases CCTTATAGTTTATTTACTTTTTGACGAGTCTAATGATGTCACGCATTTTCGCCATAAAGCCTGCTTGGTTCAGCAGGCGC AGATTATTTTGAGTATCAAT
Downstream 100 bases:
>100_bases TAAATTGTTGATTTTTACTTAGAGTAATTACTTTAAACGGTCGACTAATTACAATCGCGTAAATATGATATTTTCTTTGT GATTATGTTAATGAAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MELYFKLNLSYREFLPYYQGLADKVEVRERQGRILWINGRHFRRFLTDNGIHGQFKLVLDDKGQFVSLEQLA
Sequences:
>Translated_72_residues MELYFKLNLSYREFLPYYQGLADKVEVRERQGRILWINGRHFRRFLTDNGIHGQFKLVLDDKGQFVSLEQLA >Mature_72_residues MELYFKLNLSYREFLPYYQGLADKVEVRERQGRILWINGRHFRRFLTDNGIHGQFKLVLDDKGQFVSLEQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8678; Mature: 8678
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELYFKLNLSYREFLPYYQGLADKVEVRERQGRILWINGRHFRRFLTDNGIHGQFKLVLD CEEEEEECCCHHHHHHHHCCCCHHHHHHHCCCCEEEEECHHHEEECCCCCCCCEEEEEEE DKGQFVSLEQLA CCCCEEEHCCCC >Mature Secondary Structure MELYFKLNLSYREFLPYYQGLADKVEVRERQGRILWINGRHFRRFLTDNGIHGQFKLVLD CEEEEEECCCHHHHHHHHCCCCHHHHHHHCCCCEEEEECHHHEEECCCCCCCCEEEEEEE DKGQFVSLEQLA CCCCEEEHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA