| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117920147
Identifier: 117920147
GI number: 117920147
Start: 1998853
End: 1999071
Strand: Reverse
Name: 117920147
Synonym: Shewana3_1700
Alternate gene names: NA
Gene position: 1999071-1998853 (Counterclockwise)
Preceding gene: 117920149
Following gene: 117920144
Centisome position: 40.2
GC content: 49.32
Gene sequence:
>219_bases ATGAACAAGAAGCAAAAGATCGTTAAGAAAATGGCTAAGCGCGAAAAAGCCAAACAAAACAAAATCGAGAAGCCCAAGGT GGGTGTAAAGCCGCGTTATATTTCTAAAGCGGAGCGCGCGCGTCTTGAAGCCGAAACGCCAGAAGCCGTGGCTTTAGAAG TAGCGCAAGAGATCGCAGGTGTCGACGCTTCTAGCGCGGAAGATAAGGCTGCGAGCTAA
Upstream 100 bases:
>100_bases ACAGCAAAACATGGAGAGATTGGCAATATTCAGTTAGAATCCAGCTTTAATTGAGCCACTGGACTCAGCCTGCATAGGCA AAAACCGAATTAGAGATGTT
Downstream 100 bases:
>100_bases GCCTCTTTGTGCCGTGACTCTCGGGATGCTCGCACTCGCATAAAACGCTCTCGCGTGAATGCGAACATACCAAACATAAA GGCCACTTTTCAGTGGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MNKKQKIVKKMAKREKAKQNKIEKPKVGVKPRYISKAERARLEAETPEAVALEVAQEIAGVDASSAEDKAAS
Sequences:
>Translated_72_residues MNKKQKIVKKMAKREKAKQNKIEKPKVGVKPRYISKAERARLEAETPEAVALEVAQEIAGVDASSAEDKAAS >Mature_72_residues MNKKQKIVKKMAKREKAKQNKIEKPKVGVKPRYISKAERARLEAETPEAVALEVAQEIAGVDASSAEDKAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7920; Mature: 7920
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKQKIVKKMAKREKAKQNKIEKPKVGVKPRYISKAERARLEAETPEAVALEVAQEIAG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC VDASSAEDKAAS CCCCCCCCCCCC >Mature Secondary Structure MNKKQKIVKKMAKREKAKQNKIEKPKVGVKPRYISKAERARLEAETPEAVALEVAQEIAG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC VDASSAEDKAAS CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA