The gene/protein map for NC_008577 is currently unavailable.
Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117920093

Identifier: 117920093

GI number: 117920093

Start: 1936816

End: 1938744

Strand: Reverse

Name: 117920093

Synonym: Shewana3_1646

Alternate gene names: NA

Gene position: 1938744-1936816 (Counterclockwise)

Preceding gene: 117920094

Following gene: 117920088

Centisome position: 38.99

GC content: 52.88

Gene sequence:

>1929_bases
ATGCGTCGATTAAGTATTATCGCGGCTGCCGTCGCACTCAGCGCCTGTGGTGGCGGTGGTGGGGAGAATAATGATGGTGG
TACAGTCACCCCACCAACCACTAACGTGCCACGCTGCACCACAGTGGCTGCGCTCATCACCACAGACTCAGGCGCCATCC
GCTTTAAAACTGAGCCCCAATATGTGGTGGGACAATCCAGCGCCATTATTGCCAGCCTAGGGAATCGCGATTCACAGGAT
CTTACTTTCCGCTGGCAACAGTTAGAAGGACCCAGCATTGAACTCGTGAGTCAAAATAGTCCAGTATTAGCCTTCGATAT
TCCCACTGCAGGTAGCTACCGTTTTAGCCTACATATCAGCGGCAGTAATATCGATGAGACTGGCGAAATAGCGATCAATG
CCGACAGCAGCGCGGGGGCAATGCTGAACATTCGCCAAGATCATCAAGCCGTTGAGGGTAACGATGTCAGTCTACGAATC
GCCCAGCAAGCGGGACTTAGTGCATCAAACATCAATTGGTGTATCGCCGAGGGCCCCAGTGTTAGTCTCGATATCAGCGA
TCCCTTTAGACCCCTGTTTACCGCGCCCATTGTAGGTCAAGATACCTTAACCCGCCTTAGGGCATCGGCCACTATTAACG
GTAATACCGTGACAGACGAAGCCTATGTGCTCACTACGGCATCGCCCACGATAAGCTCTACCTACTTCGATACACCCGTG
GCTCGCACCCACGCTTATAACCCCGCCTCACCTTATGCCAGTGCCTTAACGAGCTGTGTGTACTCGAATCAGTTAAAAGA
GGCTTGTACTATCAACCAATTGCCGCTTATTGGCCAAGTCTCAAATACGCTCGATGTCGATACAATTCTCGATCGTGTAT
TAGTGTCCCACGATTGGATGGGAGACAATTTCGCCGCGTTTTTACGTCAAATGGACCCGAACAGCGATTTCGCCCGCCTG
CTACAATCGGTCACCGCCGTGGTGATAAGCTATGATGTGCGCCCCTCGTTTTATTGGGTCGTCACAGGGGCGATTTATCT
CGACCCGAATGATTTGTGGCTCACGCCAACCCAGCGTGACAGCATTAACGAGGCGCCGGATTATCGCAGCGACTTTGGCA
GTGAGCTCAATTTCCTCATGCCGTGGCGTTACGTTAAAAATAACCAATATGCTTCACAGGGATTCCCAATCACGACGCGC
GCCACCCGCACGCTCAGCCAGATTAATCCCGATCTCGCCTCACTCTTGTACCATGAGCTCGCCCACGCCAATGACTTCTT
CCCAAGAAGCATTCACGCCACGCTCACTGGCCCCAGATTGTTGGACGACTATAGCCGCCGAAATGCCAATAAGAGTTTGA
TATCCGATCAAGTGAGTCGCAACTATCCCCTCACCAGTACCGAAATGACAGGCCTTGCAGCGGTGAGCTTCTTGGGCGCC
AAAGCCACTGCAACCCAAAAAGCCTATCAACCCTCGGATGTGAGTACGTTTTTCTCCGGTGATATCGCCAATGACTTTTA
TAACTATTCCAGTACCCGTGAAGACGCGGCGATGTTATTCGAAGAAGCCATGATGAGCTATCGCTATCAAATCCAGCGCG
ATGTGGCCGTCACTAACCTGCCCGCCGTACTCACGGCAGATACAGTGATAGTTGACTGGGGACAAAGGGGACGAATTGGT
GATGATAGTCTGGCAAACCGCGCCGCCTTAGTGATCGATGGCATGCTGCCAGAGCTTGACGGCATCAGCCTGCTCGCGAG
CCTGCCCGAGCCCATTGCTATGACTCAAGGCCAAAGCTGGCGCCAAACCCTGGGGATTTCACCCAATACCACAGTGAAAG
GACTACAAGGAGTTGCGGCAAGTAGCGAAACGCTTACCGAGCCAGAGCTGCGTTTCAGTGGCGATCGTCACCGCCATCCA
CAGCAGTGA

Upstream 100 bases:

>100_bases
GTCGATATGCCAAGGAATGACGGCTAATCAAGCCAGTCATACTACAAAAACAATAACATAGCGTTAATTGGAGTGAGTCA
TGATGGAAATATGGGTTCCA

Downstream 100 bases:

>100_bases
TCTGGATTGCTAAATCGGGCAAATACACTAGACTCAAGCCTGTTAGCAGACCTAAGTTAAAGATTAATATGTCTCGTCCT
AAGATAGGTTGACAGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQYVVGQSSAIIASLGNRDSQD
LTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHISGSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRI
AQQAGLSASNINWCIAEGPSVSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV
ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWMGDNFAAFLRQMDPNSDFARL
LQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRDSINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTR
ATRTLSQINPDLASLLYHELAHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA
KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNLPAVLTADTVIVDWGQRGRIG
DDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSWRQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHP
QQ

Sequences:

>Translated_642_residues
MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQYVVGQSSAIIASLGNRDSQD
LTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHISGSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRI
AQQAGLSASNINWCIAEGPSVSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV
ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWMGDNFAAFLRQMDPNSDFARL
LQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRDSINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTR
ATRTLSQINPDLASLLYHELAHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA
KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNLPAVLTADTVIVDWGQRGRIG
DDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSWRQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHP
QQ
>Mature_642_residues
MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQYVVGQSSAIIASLGNRDSQD
LTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHISGSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRI
AQQAGLSASNINWCIAEGPSVSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV
ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWMGDNFAAFLRQMDPNSDFARL
LQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRDSINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTR
ATRTLSQINPDLASLLYHELAHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA
KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNLPAVLTADTVIVDWGQRGRIG
DDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSWRQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHP
QQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69746; Mature: 69746

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCHHEEEEEEEECCCEEEEECCCC
YVVGQSSAIIASLGNRDSQDLTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHIS
EEECCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCCEEEEEEEC
GSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRIAQQAGLSASNINWCIAEGPS
CCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEECCCE
VSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV
EEEECCCCCCHHHCCCCCCHHHHHHHHHEEEECCCEECCCEEEEEECCCCCCCCCCCCCC
ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWM
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCC
GDNFAAFLRQMDPNSDFARLLQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRD
CCHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCEEECCCCCC
SINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTRATRTLSQINPDLASLLYHEL
CCCCCCCHHHHHCCCCCEEECEEEECCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHH
AHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA
HHCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNL
CHHHHHHCCCCCCCHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECC
PAVLTADTVIVDWGQRGRIGDDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSW
CEEEEECEEEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHCCCCHHHCCCCCH
RQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHPQQ
HHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCHHEEEEEEEECCCEEEEECCCC
YVVGQSSAIIASLGNRDSQDLTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHIS
EEECCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCCEEEEEEEC
GSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRIAQQAGLSASNINWCIAEGPS
CCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEECCCE
VSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV
EEEECCCCCCHHHCCCCCCHHHHHHHHHEEEECCCEECCCEEEEEECCCCCCCCCCCCCC
ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWM
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCC
GDNFAAFLRQMDPNSDFARLLQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRD
CCHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCEEECCCCCC
SINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTRATRTLSQINPDLASLLYHEL
CCCCCCCHHHHHCCCCCEEECEEEECCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHH
AHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA
HHCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNL
CHHHHHHCCCCCCCHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECC
PAVLTADTVIVDWGQRGRIGDDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSW
CEEEEECEEEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHCCCCHHHCCCCCH
RQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHPQQ
HHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA