| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920093
Identifier: 117920093
GI number: 117920093
Start: 1936816
End: 1938744
Strand: Reverse
Name: 117920093
Synonym: Shewana3_1646
Alternate gene names: NA
Gene position: 1938744-1936816 (Counterclockwise)
Preceding gene: 117920094
Following gene: 117920088
Centisome position: 38.99
GC content: 52.88
Gene sequence:
>1929_bases ATGCGTCGATTAAGTATTATCGCGGCTGCCGTCGCACTCAGCGCCTGTGGTGGCGGTGGTGGGGAGAATAATGATGGTGG TACAGTCACCCCACCAACCACTAACGTGCCACGCTGCACCACAGTGGCTGCGCTCATCACCACAGACTCAGGCGCCATCC GCTTTAAAACTGAGCCCCAATATGTGGTGGGACAATCCAGCGCCATTATTGCCAGCCTAGGGAATCGCGATTCACAGGAT CTTACTTTCCGCTGGCAACAGTTAGAAGGACCCAGCATTGAACTCGTGAGTCAAAATAGTCCAGTATTAGCCTTCGATAT TCCCACTGCAGGTAGCTACCGTTTTAGCCTACATATCAGCGGCAGTAATATCGATGAGACTGGCGAAATAGCGATCAATG CCGACAGCAGCGCGGGGGCAATGCTGAACATTCGCCAAGATCATCAAGCCGTTGAGGGTAACGATGTCAGTCTACGAATC GCCCAGCAAGCGGGACTTAGTGCATCAAACATCAATTGGTGTATCGCCGAGGGCCCCAGTGTTAGTCTCGATATCAGCGA TCCCTTTAGACCCCTGTTTACCGCGCCCATTGTAGGTCAAGATACCTTAACCCGCCTTAGGGCATCGGCCACTATTAACG GTAATACCGTGACAGACGAAGCCTATGTGCTCACTACGGCATCGCCCACGATAAGCTCTACCTACTTCGATACACCCGTG GCTCGCACCCACGCTTATAACCCCGCCTCACCTTATGCCAGTGCCTTAACGAGCTGTGTGTACTCGAATCAGTTAAAAGA GGCTTGTACTATCAACCAATTGCCGCTTATTGGCCAAGTCTCAAATACGCTCGATGTCGATACAATTCTCGATCGTGTAT TAGTGTCCCACGATTGGATGGGAGACAATTTCGCCGCGTTTTTACGTCAAATGGACCCGAACAGCGATTTCGCCCGCCTG CTACAATCGGTCACCGCCGTGGTGATAAGCTATGATGTGCGCCCCTCGTTTTATTGGGTCGTCACAGGGGCGATTTATCT CGACCCGAATGATTTGTGGCTCACGCCAACCCAGCGTGACAGCATTAACGAGGCGCCGGATTATCGCAGCGACTTTGGCA GTGAGCTCAATTTCCTCATGCCGTGGCGTTACGTTAAAAATAACCAATATGCTTCACAGGGATTCCCAATCACGACGCGC GCCACCCGCACGCTCAGCCAGATTAATCCCGATCTCGCCTCACTCTTGTACCATGAGCTCGCCCACGCCAATGACTTCTT CCCAAGAAGCATTCACGCCACGCTCACTGGCCCCAGATTGTTGGACGACTATAGCCGCCGAAATGCCAATAAGAGTTTGA TATCCGATCAAGTGAGTCGCAACTATCCCCTCACCAGTACCGAAATGACAGGCCTTGCAGCGGTGAGCTTCTTGGGCGCC AAAGCCACTGCAACCCAAAAAGCCTATCAACCCTCGGATGTGAGTACGTTTTTCTCCGGTGATATCGCCAATGACTTTTA TAACTATTCCAGTACCCGTGAAGACGCGGCGATGTTATTCGAAGAAGCCATGATGAGCTATCGCTATCAAATCCAGCGCG ATGTGGCCGTCACTAACCTGCCCGCCGTACTCACGGCAGATACAGTGATAGTTGACTGGGGACAAAGGGGACGAATTGGT GATGATAGTCTGGCAAACCGCGCCGCCTTAGTGATCGATGGCATGCTGCCAGAGCTTGACGGCATCAGCCTGCTCGCGAG CCTGCCCGAGCCCATTGCTATGACTCAAGGCCAAAGCTGGCGCCAAACCCTGGGGATTTCACCCAATACCACAGTGAAAG GACTACAAGGAGTTGCGGCAAGTAGCGAAACGCTTACCGAGCCAGAGCTGCGTTTCAGTGGCGATCGTCACCGCCATCCA CAGCAGTGA
Upstream 100 bases:
>100_bases GTCGATATGCCAAGGAATGACGGCTAATCAAGCCAGTCATACTACAAAAACAATAACATAGCGTTAATTGGAGTGAGTCA TGATGGAAATATGGGTTCCA
Downstream 100 bases:
>100_bases TCTGGATTGCTAAATCGGGCAAATACACTAGACTCAAGCCTGTTAGCAGACCTAAGTTAAAGATTAATATGTCTCGTCCT AAGATAGGTTGACAGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQYVVGQSSAIIASLGNRDSQD LTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHISGSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRI AQQAGLSASNINWCIAEGPSVSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWMGDNFAAFLRQMDPNSDFARL LQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRDSINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTR ATRTLSQINPDLASLLYHELAHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNLPAVLTADTVIVDWGQRGRIG DDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSWRQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHP QQ
Sequences:
>Translated_642_residues MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQYVVGQSSAIIASLGNRDSQD LTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHISGSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRI AQQAGLSASNINWCIAEGPSVSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWMGDNFAAFLRQMDPNSDFARL LQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRDSINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTR ATRTLSQINPDLASLLYHELAHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNLPAVLTADTVIVDWGQRGRIG DDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSWRQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHP QQ >Mature_642_residues MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQYVVGQSSAIIASLGNRDSQD LTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHISGSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRI AQQAGLSASNINWCIAEGPSVSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWMGDNFAAFLRQMDPNSDFARL LQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRDSINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTR ATRTLSQINPDLASLLYHELAHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNLPAVLTADTVIVDWGQRGRIG DDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSWRQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHP QQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69746; Mature: 69746
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQ CCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCHHEEEEEEEECCCEEEEECCCC YVVGQSSAIIASLGNRDSQDLTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHIS EEECCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCCEEEEEEEC GSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRIAQQAGLSASNINWCIAEGPS CCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEECCCE VSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV EEEECCCCCCHHHCCCCCCHHHHHHHHHEEEECCCEECCCEEEEEECCCCCCCCCCCCCC ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWM HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCC GDNFAAFLRQMDPNSDFARLLQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRD CCHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCEEECCCCCC SINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTRATRTLSQINPDLASLLYHEL CCCCCCCHHHHHCCCCCEEECEEEECCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHH AHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA HHCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNL CHHHHHHCCCCCCCHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECC PAVLTADTVIVDWGQRGRIGDDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSW CEEEEECEEEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHCCCCHHHCCCCCH RQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHPQQ HHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRLSIIAAAVALSACGGGGGENNDGGTVTPPTTNVPRCTTVAALITTDSGAIRFKTEPQ CCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCHHEEEEEEEECCCEEEEECCCC YVVGQSSAIIASLGNRDSQDLTFRWQQLEGPSIELVSQNSPVLAFDIPTAGSYRFSLHIS EEECCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCCEEEEEEEC GSNIDETGEIAINADSSAGAMLNIRQDHQAVEGNDVSLRIAQQAGLSASNINWCIAEGPS CCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEECCCE VSLDISDPFRPLFTAPIVGQDTLTRLRASATINGNTVTDEAYVLTTASPTISSTYFDTPV EEEECCCCCCHHHCCCCCCHHHHHHHHHEEEECCCEECCCEEEEEECCCCCCCCCCCCCC ARTHAYNPASPYASALTSCVYSNQLKEACTINQLPLIGQVSNTLDVDTILDRVLVSHDWM HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCC GDNFAAFLRQMDPNSDFARLLQSVTAVVISYDVRPSFYWVVTGAIYLDPNDLWLTPTQRD CCHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCEEECCCCCC SINEAPDYRSDFGSELNFLMPWRYVKNNQYASQGFPITTRATRTLSQINPDLASLLYHEL CCCCCCCHHHHHCCCCCEEECEEEECCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHH AHANDFFPRSIHATLTGPRLLDDYSRRNANKSLISDQVSRNYPLTSTEMTGLAAVSFLGA HHCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC KATATQKAYQPSDVSTFFSGDIANDFYNYSSTREDAAMLFEEAMMSYRYQIQRDVAVTNL CHHHHHHCCCCCCCHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECC PAVLTADTVIVDWGQRGRIGDDSLANRAALVIDGMLPELDGISLLASLPEPIAMTQGQSW CEEEEECEEEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHCCCCHHHCCCCCH RQTLGISPNTTVKGLQGVAASSETLTEPELRFSGDRHRHPQQ HHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA