| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is fhuE [H]
Identifier: 117919955
GI number: 117919955
Start: 1753615
End: 1755828
Strand: Reverse
Name: fhuE [H]
Synonym: Shewana3_1507
Alternate gene names: 117919955
Gene position: 1755828-1753615 (Counterclockwise)
Preceding gene: 117919956
Following gene: 117919954
Centisome position: 35.31
GC content: 51.72
Gene sequence:
>2214_bases ATGGAATTTAAGATCATTATTATGAAAACCTTCCCCCTCAACAGCCTCGCGGCGCACTGCCAACTCGCCATCACACGCCC TGAGCTTATCCTCTGCTCTGCCATACTCAGCATGCCCTATGCTTATGCCGATGCCAGCGATACCCAGAAAAAATCCACCA AAGACATTGAAATCATTAATGTCGTTGGCGCTAAGGATCTCCACGATAATCGCTACAAAACTCAGGCGATGAATACGGCA ACGGGCTTAGATTTGTCCTATTTAGAGACGCCGCAATCCGTCACCTCTGTGACTAGCCAAATGATGCATGACCAGCAACT AAACAGCGTGATCGACGCCATGACTAGCGTAGCAGGCATCAACGCTCGGCCGATGGACAACGACAGGTACAGCATCAGCT CCCGCGGGATTGCGGTCACCAGTATTCTTTACGATGGCGTGCCCACCACCTATGACACCCGTTTTAACTACGGCGATAAC CTTATCGATACCGCCATCTACGAGCGGGTGGAAATTGTACGTGGCGCCACAGGATTAATGACGGGTGCGGGTAATCCCTC GGCCGCGATTAACCTTATTCGTAAACGCCCGACACAAGAATTTATGGGCAGCACCTCAGTGAGTGTTGGCTCATGGAACA ATCTGCGCGGCATGGTCGATTTATCAAGCGGCTTAAATGACAGTGGCAGCATTCGTGGCCGTGTTGTCGCCGCCTATCAG GATAAGGAATCCTTCCAAGACAGATATGAGCAGCAACGCACCACCCTCTATGGCATTGTTGAAGCCGATATTACCGCCAG CACATTGCTGACCTTAGGCGTGGATTATCAAGACACCACGCCCGAAGGCACTATGTCCGGCGGTCTGCCGCTGTTCCACA GTGATGGCAGCCGTACAAATTACGATCGCGCGACCTCCACCGCCCCCGATTGGGCCTCGGCGCATACCCAAGGACTCAAT ACCTTCGCCAGCCTTGAACATCGTTTTGATAACGGTTGGGAGCTAAAAGGCACCTACAGTTACGGCGATAACTCACTGAA ATACGATGTACTCTGGGCTACGGGGTATCCCGATCCGGTAACAAACATAGGCGCAACCGCAGGCTCAATCGCCTATGTCG ATGGTAGTCGTACCCAACATAACCTCGACTTACGGGCACAGGGAATGTTTGCCCTGTTTGGCCAAGAGCACCAGCTCACC TTTGGCTGGACGGGTCAGCGCCAAGAGTTTGCCAACCCTTACTATTATCCTACGGCCGCCGTACCGCCCTTAGGGGATTT TCGCGATCCCAACTTCCAGTATCCAAAACCTCAGTGGAAGGAGACTCACACCACGGGAACCTTCGGCGAAACCGAACAAA GCGCCGCCTATGTGGCCACGAAGCTTAATCTGACCGATGCCTTGGCATTGCTTGCGGGGCTGCGCCTGAACAAGTGGCAA ACCGACCAAGATAACTTTGGCAGCATGTATGACTTTAAGGTCGACAATGAGCTCACCACCTATTTTGGCCTGACCTACGC ACTCGGCGAGCAATACTCCCTCTACGCCAGTTATACGGATATTTTTGCGCCGCAAACCTTGCAGCGCATCGATGCCAGCT ACATCGACCCCGTCAAAGGTAAAAACTACGAGGCGGGTATTAAGGCCAGCTTGATGGATGAAAGCTTAGATATGTCGTTG TCGGTATTTGAAATTCGCCAAGACAATGTTGGTGAACGCACTGGCGATGTGTTGCCGGGCACCACTATTCCAGTATATCG AGAGGTTAACAGCACTAAAACCCAAGGCTTTGAGTTTGAATCCACGGGCAAAATCACCGATGACTGGAATATCTACTTCG GCTACACCCAATTCAGCACCGATGACCCTAAGGGCAATCGCATCAACACCACTTCCCCTCGCCAGCAGCTAAAACTCTTT ACCACTTATACCTTTAGCGGCGATTGGAACAAATTGCAGCTTGGCGCTGGGGTCAATTGGCAAAGCCGTGTCTACCAAAC CGTGAACTCGCCCTTAGGCAGAGTCGAGGTTGAGCAAGACTCCTACGCGTTAGCCAGCTTAATGGCAAGTTATGCCTTTA CCGAGCAGCTAAAGCTAAGCGCCAATGTGCACAACGCCTTAGATAAAACCTACTACAGCCAAGTGGGGCAATATAGCCAA TTCCAATACGGCGCCCCACGCAGCATGAGTGTGAATTTGGATTATCGCTTCTAA
Upstream 100 bases:
>100_bases CAAACCCAACCCCTAAATCACTTTTCACCTTGAGTGGGCCCGCGCCCACTCTGGGCACGCGTCTGTGCCTAAAAACAACC TAGTCAATCAAACAGCCTAA
Downstream 100 bases:
>100_bases CGGACTGTCGATAACCAGTTGTTCATCAATGAAAACTGCGGTGAATAAACTCACCGCAGTTTAATCAATTCAAGCCTAAG GAGTGATTATGGCGCGCCAA
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MEFKIIIMKTFPLNSLAAHCQLAITRPELILCSAILSMPYAYADASDTQKKSTKDIEIINVVGAKDLHDNRYKTQAMNTA TGLDLSYLETPQSVTSVTSQMMHDQQLNSVIDAMTSVAGINARPMDNDRYSISSRGIAVTSILYDGVPTTYDTRFNYGDN LIDTAIYERVEIVRGATGLMTGAGNPSAAINLIRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLNDSGSIRGRVVAAYQ DKESFQDRYEQQRTTLYGIVEADITASTLLTLGVDYQDTTPEGTMSGGLPLFHSDGSRTNYDRATSTAPDWASAHTQGLN TFASLEHRFDNGWELKGTYSYGDNSLKYDVLWATGYPDPVTNIGATAGSIAYVDGSRTQHNLDLRAQGMFALFGQEHQLT FGWTGQRQEFANPYYYPTAAVPPLGDFRDPNFQYPKPQWKETHTTGTFGETEQSAAYVATKLNLTDALALLAGLRLNKWQ TDQDNFGSMYDFKVDNELTTYFGLTYALGEQYSLYASYTDIFAPQTLQRIDASYIDPVKGKNYEAGIKASLMDESLDMSL SVFEIRQDNVGERTGDVLPGTTIPVYREVNSTKTQGFEFESTGKITDDWNIYFGYTQFSTDDPKGNRINTTSPRQQLKLF TTYTFSGDWNKLQLGAGVNWQSRVYQTVNSPLGRVEVEQDSYALASLMASYAFTEQLKLSANVHNALDKTYYSQVGQYSQ FQYGAPRSMSVNLDYRF
Sequences:
>Translated_737_residues MEFKIIIMKTFPLNSLAAHCQLAITRPELILCSAILSMPYAYADASDTQKKSTKDIEIINVVGAKDLHDNRYKTQAMNTA TGLDLSYLETPQSVTSVTSQMMHDQQLNSVIDAMTSVAGINARPMDNDRYSISSRGIAVTSILYDGVPTTYDTRFNYGDN LIDTAIYERVEIVRGATGLMTGAGNPSAAINLIRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLNDSGSIRGRVVAAYQ DKESFQDRYEQQRTTLYGIVEADITASTLLTLGVDYQDTTPEGTMSGGLPLFHSDGSRTNYDRATSTAPDWASAHTQGLN TFASLEHRFDNGWELKGTYSYGDNSLKYDVLWATGYPDPVTNIGATAGSIAYVDGSRTQHNLDLRAQGMFALFGQEHQLT FGWTGQRQEFANPYYYPTAAVPPLGDFRDPNFQYPKPQWKETHTTGTFGETEQSAAYVATKLNLTDALALLAGLRLNKWQ TDQDNFGSMYDFKVDNELTTYFGLTYALGEQYSLYASYTDIFAPQTLQRIDASYIDPVKGKNYEAGIKASLMDESLDMSL SVFEIRQDNVGERTGDVLPGTTIPVYREVNSTKTQGFEFESTGKITDDWNIYFGYTQFSTDDPKGNRINTTSPRQQLKLF TTYTFSGDWNKLQLGAGVNWQSRVYQTVNSPLGRVEVEQDSYALASLMASYAFTEQLKLSANVHNALDKTYYSQVGQYSQ FQYGAPRSMSVNLDYRF >Mature_737_residues MEFKIIIMKTFPLNSLAAHCQLAITRPELILCSAILSMPYAYADASDTQKKSTKDIEIINVVGAKDLHDNRYKTQAMNTA TGLDLSYLETPQSVTSVTSQMMHDQQLNSVIDAMTSVAGINARPMDNDRYSISSRGIAVTSILYDGVPTTYDTRFNYGDN LIDTAIYERVEIVRGATGLMTGAGNPSAAINLIRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLNDSGSIRGRVVAAYQ DKESFQDRYEQQRTTLYGIVEADITASTLLTLGVDYQDTTPEGTMSGGLPLFHSDGSRTNYDRATSTAPDWASAHTQGLN TFASLEHRFDNGWELKGTYSYGDNSLKYDVLWATGYPDPVTNIGATAGSIAYVDGSRTQHNLDLRAQGMFALFGQEHQLT FGWTGQRQEFANPYYYPTAAVPPLGDFRDPNFQYPKPQWKETHTTGTFGETEQSAAYVATKLNLTDALALLAGLRLNKWQ TDQDNFGSMYDFKVDNELTTYFGLTYALGEQYSLYASYTDIFAPQTLQRIDASYIDPVKGKNYEAGIKASLMDESLDMSL SVFEIRQDNVGERTGDVLPGTTIPVYREVNSTKTQGFEFESTGKITDDWNIYFGYTQFSTDDPKGNRINTTSPRQQLKLF TTYTFSGDWNKLQLGAGVNWQSRVYQTVNSPLGRVEVEQDSYALASLMASYAFTEQLKLSANVHNALDKTYYSQVGQYSQ FQYGAPRSMSVNLDYRF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=731, Percent_Identity=37.0725034199726, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1786344, Length=769, Percent_Identity=22.1066319895969, Blast_Score=102, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 82004; Mature: 82004
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFKIIIMKTFPLNSLAAHCQLAITRPELILCSAILSMPYAYADASDTQKKSTKDIEIIN CCEEEEEEEECCCHHHHCEEEEEECCCHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEE VVGAKDLHDNRYKTQAMNTATGLDLSYLETPQSVTSVTSQMMHDQQLNSVIDAMTSVAGI EECCCCCCCCCHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NARPMDNDRYSISSRGIAVTSILYDGVPTTYDTRFNYGDNLIDTAIYERVEIVRGATGLM CCCCCCCCCEEECCCCEEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEE TGAGNPSAAINLIRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLNDSGSIRGRVVAAYQ ECCCCHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEEC DKESFQDRYEQQRTTLYGIVEADITASTLLTLGVDYQDTTPEGTMSGGLPLFHSDGSRTN CHHHHHHHHHHHHCEEEEEEECCCCCEEHEEEECCCCCCCCCCCCCCCCEEEECCCCCCC YDRATSTAPDWASAHTQGLNTFASLEHRFDNGWELKGTYSYGDNSLKYDVLWATGYPDPV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCCCCCH TNIGATAGSIAYVDGSRTQHNLDLRAQGMFALFGQEHQLTFGWTGQRQEFANPYYYPTAA HHCCCCCCEEEEEECCCCCCCCCEEECCEEEEECCCEEEEEEECCCHHHHCCCEECCCCC VPPLGDFRDPNFQYPKPQWKETHTTGTFGETEQSAAYVATKLNLTDALALLAGLRLNKWQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCC TDQDNFGSMYDFKVDNELTTYFGLTYALGEQYSLYASYTDIFAPQTLQRIDASYIDPVKG CCCCCCCCEEEEEECCCCHHHHEEHHHHCCCEEEEEEHHHHCCHHHHHHHCHHHCCCCCC KNYEAGIKASLMDESLDMSLSVFEIRQDNVGERTGDVLPGTTIPVYREVNSTKTQGFEFE CCCCCCCEEEHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEC STGKITDDWNIYFGYTQFSTDDPKGNRINTTSPRQQLKLFTTYTFSGDWNKLQLGAGVNW CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCEEEECCCCCH QSRVYQTVNSPLGRVEVEQDSYALASLMASYAFTEQLKLSANVHNALDKTYYSQVGQYSQ HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCC FQYGAPRSMSVNLDYRF CCCCCCCEEEEEEEECC >Mature Secondary Structure MEFKIIIMKTFPLNSLAAHCQLAITRPELILCSAILSMPYAYADASDTQKKSTKDIEIIN CCEEEEEEEECCCHHHHCEEEEEECCCHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEE VVGAKDLHDNRYKTQAMNTATGLDLSYLETPQSVTSVTSQMMHDQQLNSVIDAMTSVAGI EECCCCCCCCCHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NARPMDNDRYSISSRGIAVTSILYDGVPTTYDTRFNYGDNLIDTAIYERVEIVRGATGLM CCCCCCCCCEEECCCCEEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEE TGAGNPSAAINLIRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLNDSGSIRGRVVAAYQ ECCCCHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEEC DKESFQDRYEQQRTTLYGIVEADITASTLLTLGVDYQDTTPEGTMSGGLPLFHSDGSRTN CHHHHHHHHHHHHCEEEEEEECCCCCEEHEEEECCCCCCCCCCCCCCCCEEEECCCCCCC YDRATSTAPDWASAHTQGLNTFASLEHRFDNGWELKGTYSYGDNSLKYDVLWATGYPDPV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCCCCCH TNIGATAGSIAYVDGSRTQHNLDLRAQGMFALFGQEHQLTFGWTGQRQEFANPYYYPTAA HHCCCCCCEEEEEECCCCCCCCCEEECCEEEEECCCEEEEEEECCCHHHHCCCEECCCCC VPPLGDFRDPNFQYPKPQWKETHTTGTFGETEQSAAYVATKLNLTDALALLAGLRLNKWQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCC TDQDNFGSMYDFKVDNELTTYFGLTYALGEQYSLYASYTDIFAPQTLQRIDASYIDPVKG CCCCCCCCEEEEEECCCCHHHHEEHHHHCCCEEEEEEHHHHCCHHHHHHHCHHHCCCCCC KNYEAGIKASLMDESLDMSLSVFEIRQDNVGERTGDVLPGTTIPVYREVNSTKTQGFEFE CCCCCCCEEEHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEC STGKITDDWNIYFGYTQFSTDDPKGNRINTTSPRQQLKLFTTYTFSGDWNKLQLGAGVNW CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCEEEECCCCCH QSRVYQTVNSPLGRVEVEQDSYALASLMASYAFTEQLKLSANVHNALDKTYYSQVGQYSQ HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCC FQYGAPRSMSVNLDYRF CCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]