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The map label for this gene is flgC [H]

Identifier: 117919770

GI number: 117919770

Start: 1534888

End: 1535304

Strand: Direct

Name: flgC [H]

Synonym: Shewana3_1322

Alternate gene names: 117919770

Gene position: 1534888-1535304 (Clockwise)

Preceding gene: 117919769

Following gene: 117919771

Centisome position: 30.87

GC content: 45.08

Gene sequence:

>417_bases
ATGAGTTTATTTAATATCTTCGATGTTGCGGGGTCTGGCATGTCAGCCCAGTCTCTGCGGCTAAATACTACCGCGAGTAA
CATTGCTAACGCAGATTCAGTCTCCAGCAGTGTAGATAAAACTTACCGTTCTCGTCATCCCATTTTTGAAGCCGAAATGG
CCAAGGCGCAAAGTCAGCAACAAGCTTCCCAAGGTGTCACGGTGAAAGGCATAGTCGAGAGTGATAAGCCCCTATTAAAA
GAGTATTCGCCGGATCATCCGATGGCGGATGCTGATGGCTTTATTTACAAACCAAATGTGAATGTCATGGAAGAAATGGC
TGACATGATTTCAGCTTCTCGCTCATATCAGATGAATGTTCAAGTGGCTGAGGCGGCAAAATCTATGCTGCAACAAACAC
TTGGGATGGGTAAATAA

Upstream 100 bases:

>100_bases
AGTCGGCATTTATGCAAAATGCGCTCGAATATCAAATGTCTCTGGGATTTTTGGACAGTAAGTTTAGCGGCATGAAAAAA
GCGCTGAGAGGGGATTAATC

Downstream 100 bases:

>100_bases
TATGCGTTATTTAGGAGGTACGTTGTGAGCCTCATTAACCAACTGAGTCAAACCTCATCGCAGCTGACTCAAACAAACAC
TCAATCGAATACGGTATCAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSLFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMAKAQSQQQASQGVTVKGIVESDKPLLK
EYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLGMGK

Sequences:

>Translated_138_residues
MSLFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMAKAQSQQQASQGVTVKGIVESDKPLLK
EYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLGMGK
>Mature_137_residues
SLFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMAKAQSQQQASQGVTVKGIVESDKPLLKE
YSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLGMGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=46.3768115942029, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14958; Mature: 14827

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMAKAQSQQ
CCCHHHHHHCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QASQGVTVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV
HHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEH
QVAEAAKSMLQQTLGMGK
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMAKAQSQQ
CCHHHHHHCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QASQGVTVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV
HHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEH
QVAEAAKSMLQQTLGMGK
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]