| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919759
Identifier: 117919759
GI number: 117919759
Start: 1525147
End: 1526442
Strand: Reverse
Name: 117919759
Synonym: Shewana3_1311
Alternate gene names: NA
Gene position: 1526442-1525147 (Counterclockwise)
Preceding gene: 117919760
Following gene: 117919758
Centisome position: 30.7
GC content: 47.3
Gene sequence:
>1296_bases ATGACTGATTTACTACAACAGAATATGGCTATTATCCGCCGTCGCTGGCCGGAAGTGGCTCAGACCATGGACGCAGCAAA TCCCGACAGCCTGGATGCCATGTTGGTGACAGGTGCCAATCACACTATCAGCGTTAACGGTATCCAGCTCAGCAGCTGTT ATAATCGCTTGGCCGAAGCGGAACTTATGATAAATCAGCTTCCAGCTTGGTGCAGCACCGTTTCTGTTTATGGGGTCGGC ATGGGTGATGTACCCACCTTGCTCTCTGATAACAAACACTTGGAACATATTCGTATCTGCCCGCTCAATTTGAATCTGTT AGTTTTGTTGCTCAGCTACACAGATCAAAGCGAGTGGTTAAGCGATCTGCGGGTAGTACTGGAACCCAATCCCCGGCAAG ATGAGCTGGCGCAGCATTACATTGCAATAATATCTGATCTGCAGCTCATCAGTGACCATAACGCCAGACTGCGTGATCTG TTGATGTTTCATAATAATCTTGCGTTTGCCAACAAGCGGCACAAACCTGAAGATGTGAAATTTCAGCGCAGGTTGGCAGA CAATCTTGAGACCATAAAACAGGATCCCGATGCTGCATCACTAAGCTTGCTCTTTCAACCAAGCAAGACTTTGGTTATAG GTACGGGTCCGTCGCTGGAACAGCATTATGATTATTTGAGGGCACAAATGGCATTACCCTTGGCAACACGGCCCCTGATG ATAGCTGTAGATACGGCATTAAAAGCCTTGGTCAACGAAAATATCATTCCGGATATTGTCATAAGCTTGGATTACAACAT TTCTCTTGCTCACTTGCCCGAAGTGCTTCCGGAAAAAGTTAAATTGGTCTATTTTCCCAGGTCTCAGCCACAGGTATTGC ATGCCTGGCCCGGGGAGCGCTTCGCTGCCTATTCGCTCAATGAAACCTATGATGAACTCAACAGCCGCTATCCCAAGCTG CGCTTGTTTGCCAATGGCAGTGTCATACATCCGGCCATTGACTTGGCGGTATACCTGAAGAGTAAACAAATCATCTTATT TGGTTGTGACTTCTGTTATCCCAAAAACAAGACCCATGCCTTCTGGCCCGAGGGCAAGCTCGGGCCCTCAATAACAGACT CCAAACACCACTGGGTCATCAACGGGCATGGAGATAAAGTGATTACTCACTTGAATTTCCGTGGTTATTTACTCGCACTG GAACACTATATCCGCACAAAACCAGAGGTGGCATTTTATAACTCGAGTCTGGAAGGCGCCGCCATTAAAGGAACCCTTTA TCTGGAGTGTAAATGA
Upstream 100 bases:
>100_bases TCAGTTATCTTAAATATGCATTATTAGATTTTATCAAATCAAATGAAAGCCATCTAACTGCTTGCAACAAAGTAAAAACT TTTTCGTAGGAACGTGCTCC
Downstream 100 bases:
>100_bases TGAAAAATGATATCAATACAGTCCTGATCCCCAAGTTGATAAGTACAGCCCATAAATTGAGATTAGGTCAGGAAGCCGAT GGTTCAAGCGATTTTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTDLLQQNMAIIRRRWPEVAQTMDAANPDSLDAMLVTGANHTISVNGIQLSSCYNRLAEAELMINQLPAWCSTVSVYGVG MGDVPTLLSDNKHLEHIRICPLNLNLLVLLLSYTDQSEWLSDLRVVLEPNPRQDELAQHYIAIISDLQLISDHNARLRDL LMFHNNLAFANKRHKPEDVKFQRRLADNLETIKQDPDAASLSLLFQPSKTLVIGTGPSLEQHYDYLRAQMALPLATRPLM IAVDTALKALVNENIIPDIVISLDYNISLAHLPEVLPEKVKLVYFPRSQPQVLHAWPGERFAAYSLNETYDELNSRYPKL RLFANGSVIHPAIDLAVYLKSKQIILFGCDFCYPKNKTHAFWPEGKLGPSITDSKHHWVINGHGDKVITHLNFRGYLLAL EHYIRTKPEVAFYNSSLEGAAIKGTLYLECK
Sequences:
>Translated_431_residues MTDLLQQNMAIIRRRWPEVAQTMDAANPDSLDAMLVTGANHTISVNGIQLSSCYNRLAEAELMINQLPAWCSTVSVYGVG MGDVPTLLSDNKHLEHIRICPLNLNLLVLLLSYTDQSEWLSDLRVVLEPNPRQDELAQHYIAIISDLQLISDHNARLRDL LMFHNNLAFANKRHKPEDVKFQRRLADNLETIKQDPDAASLSLLFQPSKTLVIGTGPSLEQHYDYLRAQMALPLATRPLM IAVDTALKALVNENIIPDIVISLDYNISLAHLPEVLPEKVKLVYFPRSQPQVLHAWPGERFAAYSLNETYDELNSRYPKL RLFANGSVIHPAIDLAVYLKSKQIILFGCDFCYPKNKTHAFWPEGKLGPSITDSKHHWVINGHGDKVITHLNFRGYLLAL EHYIRTKPEVAFYNSSLEGAAIKGTLYLECK >Mature_430_residues TDLLQQNMAIIRRRWPEVAQTMDAANPDSLDAMLVTGANHTISVNGIQLSSCYNRLAEAELMINQLPAWCSTVSVYGVGM GDVPTLLSDNKHLEHIRICPLNLNLLVLLLSYTDQSEWLSDLRVVLEPNPRQDELAQHYIAIISDLQLISDHNARLRDLL MFHNNLAFANKRHKPEDVKFQRRLADNLETIKQDPDAASLSLLFQPSKTLVIGTGPSLEQHYDYLRAQMALPLATRPLMI AVDTALKALVNENIIPDIVISLDYNISLAHLPEVLPEKVKLVYFPRSQPQVLHAWPGERFAAYSLNETYDELNSRYPKLR LFANGSVIHPAIDLAVYLKSKQIILFGCDFCYPKNKTHAFWPEGKLGPSITDSKHHWVINGHGDKVITHLNFRGYLLALE HYIRTKPEVAFYNSSLEGAAIKGTLYLECK
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48734; Mature: 48603
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLLQQNMAIIRRRWPEVAQTMDAANPDSLDAMLVTGANHTISVNGIQLSSCYNRLAEA CCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEECCCCEEEECCEEHHHHHHHHHHH ELMINQLPAWCSTVSVYGVGMGDVPTLLSDNKHLEHIRICPLNLNLLVLLLSYTDQSEWL HHHHHHCCHHHCEEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCEEEEEEECCCHHHHH SDLRVVLEPNPRQDELAQHYIAIISDLQLISDHNARLRDLLMFHNNLAFANKRHKPEDVK HHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCCCCCHH FQRRLADNLETIKQDPDAASLSLLFQPSKTLVIGTGPSLEQHYDYLRAQMALPLATRPLM HHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEE IAVDTALKALVNENIIPDIVISLDYNISLAHLPEVLPEKVKLVYFPRSQPQVLHAWPGER EEHHHHHHHHHCCCCCCEEEEEEECCEEHHHHHHHCCCCEEEEEECCCCCCEEEECCCCC FAAYSLNETYDELNSRYPKLRLFANGSVIHPAIDLAVYLKSKQIILFGCDFCYPKNKTHA EEEEECHHHHHHHHCCCCEEEEEECCCEECHHHEEEEEEECCEEEEEECCCCCCCCCCEE FWPEGKLGPSITDSKHHWVINGHGDKVITHLNFRGYLLALEHYIRTKPEVAFYNSSLEGA ECCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCE AIKGTLYLECK EEEEEEEEEEC >Mature Secondary Structure TDLLQQNMAIIRRRWPEVAQTMDAANPDSLDAMLVTGANHTISVNGIQLSSCYNRLAEA CHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEECCCCEEEECCEEHHHHHHHHHHH ELMINQLPAWCSTVSVYGVGMGDVPTLLSDNKHLEHIRICPLNLNLLVLLLSYTDQSEWL HHHHHHCCHHHCEEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCEEEEEEECCCHHHHH SDLRVVLEPNPRQDELAQHYIAIISDLQLISDHNARLRDLLMFHNNLAFANKRHKPEDVK HHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCCCCCHH FQRRLADNLETIKQDPDAASLSLLFQPSKTLVIGTGPSLEQHYDYLRAQMALPLATRPLM HHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEE IAVDTALKALVNENIIPDIVISLDYNISLAHLPEVLPEKVKLVYFPRSQPQVLHAWPGER EEHHHHHHHHHCCCCCCEEEEEEECCEEHHHHHHHCCCCEEEEEECCCCCCEEEECCCCC FAAYSLNETYDELNSRYPKLRLFANGSVIHPAIDLAVYLKSKQIILFGCDFCYPKNKTHA EEEEECHHHHHHHHCCCCEEEEEECCCEECHHHEEEEEEECCEEEEEECCCCCCCCCCEE FWPEGKLGPSITDSKHHWVINGHGDKVITHLNFRGYLLALEHYIRTKPEVAFYNSSLEGA ECCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCE AIKGTLYLECK EEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA