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The map label for this gene is 117919736

Identifier: 117919736

GI number: 117919736

Start: 1498780

End: 1500162

Strand: Direct

Name: 117919736

Synonym: Shewana3_1288

Alternate gene names: NA

Gene position: 1498780-1500162 (Clockwise)

Preceding gene: 117919735

Following gene: 117919737

Centisome position: 30.14

GC content: 67.17

Gene sequence:

>1383_bases
ATGAACGACGTGACCATCATCGACCGTTTCCTCGATACGTTCTCGCGCTACATCGACTCGGGCTTCGGGCTGCTACAAGG
CGAAGTGGCGTTTCTCACCGCCACGCTCATCGTCATCGACATGACGATCGCGGGACTGTACTGGGCCATGAGCCACGCCA
CCGGCCAGGGCGAGGACGTGATCGCCAAGCTGCTGCGCAAGGTGCTCTACGTCGGCGCCTTCGCCTACATCATCGGCAAC
TTCAACTGGCTGGCGAGCATCGTGTTCCGCTCGTTCGCCGGCCTGGGAATCACGGCCACCGGATCGGCCATCACGATGGA
GAATTTTCTTCAGCCGGGGCGGCTGGCGAAAACCGGCATTGACGCAGGAGCACCGATTCTGGAACAGATCGGGGACATGG
CCGGGTTCCCCGAGGTGTTCGTGAACATCGACCCCATCGTGGTGATGTTCCTCGCCTGGCTGGTGGTGATCCTCTGCTTC
TTCGTGCTGGCGGTGCAGCTTTTCATCACGCTGATCGAGTTCAAGCTGACCACGCTCGCCGGCTTCGTGCTGGTGCCGTT
CGCGCTGTGGAACAAGACGAGCTTCCTGGCGGAAAAGGTGCTCGGCAACGTGGTGTCTTCGGGCATCAAAGTCTTGGTGC
TGGCCGTCATCGTCGGCATCGGTTCGGGTCTGTTCGCCGAGTTCCAAGCGCATCCCGATGAACCATCCATCGACCATGCG
CTGGTCGTGATGCTGGCCTCGCTCGCGCTGCTGGCGCTGGGCATCTTCGGCCCCGGCATCGCCACCGGCCTGGTGTCCGG
TGCGCCTCAGCTTGGCGCGGGCGCGATGGCCGGTGCTGCTGTCGGCGCTGTCGGCACGGGCGTCGCCATCGGTGCCGCCG
CGACCGGCGTGGGCGCCGCCGTAGCCGCCGGGGCACGCATGGCGCCAGCCGCCGCGAAGCTGGCCGGTGCCGGGGCGCGT
GCCGCCACCTCAGCGGCTGGCAACGCGCGGTCGGCGTTCCAGGCGGGTTCCACCGCTGCGGGCGGCGGGGCCAAAGGCGC
GGCGGCTGGCCTTGGCAATGTCGCCAAGACCAGCGCACAGGCCGCCAGCCGCCGCGTCGCTTCTGGTGCTTCCGCAGCAG
GGCAGAAGATGACCAGTTCCTTTCGTGCCGGCTGGAACGGATCTTCGGACGATGCCGGTGCAGCCGCGGCGGGCCAATCC
GCCGCAAGCGAGGCCGCAGACGGCGCTGCCAACTCGCAGAAGCAAGAGCAACCCGCCTGGGCCAAGCGGATGCACCGCCG
CCAGCAGATCACCCATGCCGCGACCACCACCGCCCACACGCTGCGCGGTGGCGACGGCGGCGGCTCAGGGCAAGGCCCGA
GCCTGCGCGATTCCGATACCTGA

Upstream 100 bases:

>100_bases
ACGAATACGAATCGCTGGCCGAACTGCCGCCGATTCCGCCGAGCTTCGACACGCCCACCGACGACATGCCAGCGCCGCTC
ACCTCGCCGGAGAACACGCC

Downstream 100 bases:

>100_bases
CCCTCAAGGAGAACACCCATGCGATTCAAACGACCGCAGGTGCGCTACGCCGATACGCCGCAGCCTGCCACCCCGTATCA
AGCCGCCGCCCAGGTGTGGG

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Type IV Secretion System Protein; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MNDVTIIDRFLDTFSRYIDSGFGLLQGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDVIAKLLRKVLYVGAFAYIIGN
FNWLASIVFRSFAGLGITATGSAITMENFLQPGRLAKTGIDAGAPILEQIGDMAGFPEVFVNIDPIVVMFLAWLVVILCF
FVLAVQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSSGIKVLVLAVIVGIGSGLFAEFQAHPDEPSIDHA
LVVMLASLALLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAVGTGVAIGAAATGVGAAVAAGARMAPAAAKLAGAGAR
AATSAAGNARSAFQAGSTAAGGGAKGAAAGLGNVAKTSAQAASRRVASGASAAGQKMTSSFRAGWNGSSDDAGAAAAGQS
AASEAADGAANSQKQEQPAWAKRMHRRQQITHAATTTAHTLRGGDGGGSGQGPSLRDSDT

Sequences:

>Translated_460_residues
MNDVTIIDRFLDTFSRYIDSGFGLLQGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDVIAKLLRKVLYVGAFAYIIGN
FNWLASIVFRSFAGLGITATGSAITMENFLQPGRLAKTGIDAGAPILEQIGDMAGFPEVFVNIDPIVVMFLAWLVVILCF
FVLAVQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSSGIKVLVLAVIVGIGSGLFAEFQAHPDEPSIDHA
LVVMLASLALLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAVGTGVAIGAAATGVGAAVAAGARMAPAAAKLAGAGAR
AATSAAGNARSAFQAGSTAAGGGAKGAAAGLGNVAKTSAQAASRRVASGASAAGQKMTSSFRAGWNGSSDDAGAAAAGQS
AASEAADGAANSQKQEQPAWAKRMHRRQQITHAATTTAHTLRGGDGGGSGQGPSLRDSDT
>Mature_460_residues
MNDVTIIDRFLDTFSRYIDSGFGLLQGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDVIAKLLRKVLYVGAFAYIIGN
FNWLASIVFRSFAGLGITATGSAITMENFLQPGRLAKTGIDAGAPILEQIGDMAGFPEVFVNIDPIVVMFLAWLVVILCF
FVLAVQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSSGIKVLVLAVIVGIGSGLFAEFQAHPDEPSIDHA
LVVMLASLALLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAVGTGVAIGAAATGVGAAVAAGARMAPAAAKLAGAGAR
AATSAAGNARSAFQAGSTAAGGGAKGAAAGLGNVAKTSAQAASRRVASGASAAGQKMTSSFRAGWNGSSDDAGAAAAGQS
AASEAADGAANSQKQEQPAWAKRMHRRQQITHAATTTAHTLRGGDGGGSGQGPSLRDSDT

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46229; Mature: 46229

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDVTIIDRFLDTFSRYIDSGFGLLQGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDV
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IAKLLRKVLYVGAFAYIIGNFNWLASIVFRSFAGLGITATGSAITMENFLQPGRLAKTGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCHHHCCC
DAGAPILEQIGDMAGFPEVFVNIDPIVVMFLAWLVVILCFFVLAVQLFITLIEFKLTTLA
CCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVLVPFALWNKTSFLAEKVLGNVVSSGIKVLVLAVIVGIGSGLFAEFQAHPDEPSIDHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHH
LVVMLASLALLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAVGTGVAIGAAATGVGAA
HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
VAAGARMAPAAAKLAGAGARAATSAAGNARSAFQAGSTAAGGGAKGAAAGLGNVAKTSAQ
HHCCCHHCHHHHHHHCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHH
AASRRVASGASAAGQKMTSSFRAGWNGSSDDAGAAAAGQSAASEAADGAANSQKQEQPAW
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCHHCCCHH
AKRMHRRQQITHAATTTAHTLRGGDGGGSGQGPSLRDSDT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA