| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117919712
Identifier: 117919712
GI number: 117919712
Start: 1478666
End: 1479304
Strand: Direct
Name: 117919712
Synonym: Shewana3_1264
Alternate gene names: NA
Gene position: 1478666-1479304 (Clockwise)
Preceding gene: 117919711
Following gene: 117919713
Centisome position: 29.74
GC content: 62.44
Gene sequence:
>639_bases ATGATCGTTGCTTTGCTCAACCAGAAAGGCGGCGTAGGCAAGACCACGCTCGCTACCCACATCGCCGGTGAACTCGCGCT GCGCGGTCAGAACGTCATCCTGCTGGATGCCGATCCGCAAGGATCATCACTGGACTGGACACAGCGCCGAAGCCAGCAAG GTTTGCCCAGGCTGTTCAGTGCCGTGGGTCTCGCCCGTGAGACCTTGCATCAAGAGGCGCCAGAACTCGCCAGAAGAGCC GATCACGTCATCATCGATGGCCCGCCCCGGATTGCCGCCTTGGCACGCTCCGCACTGCTGGCGGCCGAGCGGGTACTGAT CCCGGTGCAACCGAGCCCCTACGACCTATGGGCTTCTACCGAGATGATGGCGTTGATCCGCGAGGCACACATGTTCCGCC CGCAGCTAACTGCGGCCTTCGTCATCAATCGGCGCGTCAGCACCACGGTAATCGGACGTGAAGCACGACAGGCACTGGCC GGACAGCCGTTGCCCGTACTGCGCGCTGAAGTGCGCCAGCGTATCGTTTTCGCCGACAGCGTGACCGCTGGCCGATTGGC ACGCGAAACGTCGCCAAAAAGCATCGCCGCACGTGAAATCACGGCGCTGGTGGATGAACTGCTGCGGTGGCCGTTATGA
Upstream 100 bases:
>100_bases ATAAACACTTATTGAAGCGGTGGATAACCGTCAACCAGCAACGGCAAAAGCGTTTTTCAGGCTTTTCAAGGTATTGCTTT CCTGTACGGAGGGCCGCGCC
Downstream 100 bases:
>100_bases GCAAGGCGCACAGCAAACGCGTCGGCATCGGTGCGCGTCCTCCCGCCAATCCACAGGCGGAGGCATGGATTCGCCAAGGC GACGCCGACGCACTCAACAA
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: Cobyrinic Acid A C-Diamide Synthase; Partition Protein; ParA Family Protein; Partition-Related Protein; Plasmid Partition Protein ParA; ParA Protein; ParA-Like Protein; Plasmid Partition Protein ParA-Like Protein; Partitioning Protein; Partition Protein A; Plasmid Partitioning Protein; ATPases Involved In Chromosome Partitioning; Plasmid Partitioning-Family Protein; ATPases Involved In Chromosome Partitioning-Like Protein; Plasmid Partition Protein; Partitioning Protein ParA; Chromosome Partitioning ATPase; ATPase ParA Type; ATPase; PARA Protein; Plasmid Stability Protein ParA; Plasmid Partitioning Protein F; Plasmid Partitioning Protein-Like; CobQ/CobB/MinD/ParA Domain-Containing Protein; CobQ/CobB/MinD/ParA Family Protein; Plasmid Partition Protein ParF; ParA Partitioning Protein; Plasmid Segregation Oscillating ATPase ParF; Partitioning Protein ParA Family; Plasmid Partitioning Protein ParA; Plasmid Partition ATPase; Chromosome Partitioning; ATPase Involved In Chromosome Partitioning-Like Protein; Plasmid Partition Protein Homolog ParA; MinD/ParA Family ATPase; ParA Partitioning-Like Protein; Chromosome Partitioning Protein ParA Family; Chromosome Partitioning Protein ParA; Partitioning Protein ParA-Family; ParA Plasmid Partitioning Protein; Chromosome Partition Protein ParA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MIVALLNQKGGVGKTTLATHIAGELALRGQNVILLDADPQGSSLDWTQRRSQQGLPRLFSAVGLARETLHQEAPELARRA DHVIIDGPPRIAALARSALLAAERVLIPVQPSPYDLWASTEMMALIREAHMFRPQLTAAFVINRRVSTTVIGREARQALA GQPLPVLRAEVRQRIVFADSVTAGRLARETSPKSIAAREITALVDELLRWPL
Sequences:
>Translated_212_residues MIVALLNQKGGVGKTTLATHIAGELALRGQNVILLDADPQGSSLDWTQRRSQQGLPRLFSAVGLARETLHQEAPELARRA DHVIIDGPPRIAALARSALLAAERVLIPVQPSPYDLWASTEMMALIREAHMFRPQLTAAFVINRRVSTTVIGREARQALA GQPLPVLRAEVRQRIVFADSVTAGRLARETSPKSIAAREITALVDELLRWPL >Mature_212_residues MIVALLNQKGGVGKTTLATHIAGELALRGQNVILLDADPQGSSLDWTQRRSQQGLPRLFSAVGLARETLHQEAPELARRA DHVIIDGPPRIAALARSALLAAERVLIPVQPSPYDLWASTEMMALIREAHMFRPQLTAAFVINRRVSTTVIGREARQALA GQPLPVLRAEVRQRIVFADSVTAGRLARETSPKSIAAREITALVDELLRWPL
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23177; Mature: 23177
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVALLNQKGGVGKTTLATHIAGELALRGQNVILLDADPQGSSLDWTQRRSQQGLPRLFS CEEEEECCCCCCCHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHHCCHHHHHH AVGLARETLHQEAPELARRADHVIIDGPPRIAALARSALLAAERVLIPVQPSPYDLWAST HHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHH EMMALIREAHMFRPQLTAAFVINRRVSTTVIGREARQALAGQPLPVLRAEVRQRIVFADS HHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC VTAGRLARETSPKSIAAREITALVDELLRWPL CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVALLNQKGGVGKTTLATHIAGELALRGQNVILLDADPQGSSLDWTQRRSQQGLPRLFS CEEEEECCCCCCCHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHHCCHHHHHH AVGLARETLHQEAPELARRADHVIIDGPPRIAALARSALLAAERVLIPVQPSPYDLWAST HHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHH EMMALIREAHMFRPQLTAAFVINRRVSTTVIGREARQALAGQPLPVLRAEVRQRIVFADS HHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC VTAGRLARETSPKSIAAREITALVDELLRWPL CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA