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The map label for this gene is 117919711

Identifier: 117919711

GI number: 117919711

Start: 1477522

End: 1478379

Strand: Direct

Name: 117919711

Synonym: Shewana3_1263

Alternate gene names: NA

Gene position: 1477522-1478379 (Clockwise)

Preceding gene: 117919710

Following gene: 117919712

Centisome position: 29.72

GC content: 63.05

Gene sequence:

>858_bases
ATGTCCAGTCCATCGCTGCCACTCCGGCAGCGGCCAACGCAGCAGCGAGAGCAGCTCGACCTGTTCCGCGCACTGCCGGC
CGAGGATATGGCACCGCGCGACGCCCAGGACTTGATGGCCTATCCGTTCTTCTCGCTGGCAAAGTCGCGGCGCACGGCGC
CGATCGACTTTCGCAGCGGCAAGATCACCATTCGTGTCGAGGGCACGCAGGAACACGGCATCGCCACTATCTGGGATGCC
GATATATTGATCTGGGCCGCCAGCCAGATTGTCGAAGCCCGCGATGCGGGCATCCAGCCGTCACGTCGAATGCAGGCCAC
GCCCTACGAGATCCTGCGCTTTATCGGGCGCGGTACGTCGCTGCGCGACTACCAGCGCCTCAAAGCCGCATTCGACCGGC
TGCAATCGACCACGGTGGCCACCTCCATCCGCGAGACCACCGGGCGGCGCCTGCACCGGTTTTCCTGGATCAACGAGTGG
AAAGAACTGGCCGATGCCAACGGCAAGCCGCTAGGCATCGAGCTGATCTTGCCGGACTGGTTCTATGCGGGCGTACTCGA
TGCTGCACTGGTATTGACCATCGACCCGACATATTTCCGGCTCACCGGCGGTATAGAGCGCTGGCTGTACCGACTGGTAC
GCAAGCATGGTGGTCGGCAGGCAAACGGTTGGCAGTTCGATGTTCCTTACCTGTATCGCAAGTCCGGCAGCTTGGCGCAG
CCGCGCGATTTTGCACGCGATCTGCGCGCCCTGGTAGCCAAGCAGTCACTGCCTGGTTACGAGCTGTCCATCGAGCGCTG
GCCCGGCGAACCAGAGATTCTCGCCTTCCGGCCCGTGCCGCAAACGGCACGGGGATAA

Upstream 100 bases:

>100_bases
CGCGCAGCTACGAGGCCACCTCCGACCCCGAATACGCCGAACGCCACGCGGGTGACTACCGTGATGGCCGCTGATCGACA
GCTCGCCGGTGGCCGTCGCC

Downstream 100 bases:

>100_bases
GTCTGGGGATGGCAGCAGAACAAGCTGTGAACGGGCTCGTGCTATCGGGCGCGCTAAGACTCGTGCTATCAGGCGCACAG
GTATCGTGCTATCAGCCGCG

Product: putative replication initiator and transcription repressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSSPSLPLRQRPTQQREQLDLFRALPAEDMAPRDAQDLMAYPFFSLAKSRRTAPIDFRSGKITIRVEGTQEHGIATIWDA
DILIWAASQIVEARDAGIQPSRRMQATPYEILRFIGRGTSLRDYQRLKAAFDRLQSTTVATSIRETTGRRLHRFSWINEW
KELADANGKPLGIELILPDWFYAGVLDAALVLTIDPTYFRLTGGIERWLYRLVRKHGGRQANGWQFDVPYLYRKSGSLAQ
PRDFARDLRALVAKQSLPGYELSIERWPGEPEILAFRPVPQTARG

Sequences:

>Translated_285_residues
MSSPSLPLRQRPTQQREQLDLFRALPAEDMAPRDAQDLMAYPFFSLAKSRRTAPIDFRSGKITIRVEGTQEHGIATIWDA
DILIWAASQIVEARDAGIQPSRRMQATPYEILRFIGRGTSLRDYQRLKAAFDRLQSTTVATSIRETTGRRLHRFSWINEW
KELADANGKPLGIELILPDWFYAGVLDAALVLTIDPTYFRLTGGIERWLYRLVRKHGGRQANGWQFDVPYLYRKSGSLAQ
PRDFARDLRALVAKQSLPGYELSIERWPGEPEILAFRPVPQTARG
>Mature_284_residues
SSPSLPLRQRPTQQREQLDLFRALPAEDMAPRDAQDLMAYPFFSLAKSRRTAPIDFRSGKITIRVEGTQEHGIATIWDAD
ILIWAASQIVEARDAGIQPSRRMQATPYEILRFIGRGTSLRDYQRLKAAFDRLQSTTVATSIRETTGRRLHRFSWINEWK
ELADANGKPLGIELILPDWFYAGVLDAALVLTIDPTYFRLTGGIERWLYRLVRKHGGRQANGWQFDVPYLYRKSGSLAQP
RDFARDLRALVAKQSLPGYELSIERWPGEPEILAFRPVPQTARG

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 32583; Mature: 32451

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPSLPLRQRPTQQREQLDLFRALPAEDMAPRDAQDLMAYPFFSLAKSRRTAPIDFRSG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCC
KITIRVEGTQEHGIATIWDADILIWAASQIVEARDAGIQPSRRMQATPYEILRFIGRGTS
EEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC
LRDYQRLKAAFDRLQSTTVATSIRETTGRRLHRFSWINEWKELADANGKPLGIELILPDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCH
FYAGVLDAALVLTIDPTYFRLTGGIERWLYRLVRKHGGRQANGWQFDVPYLYRKSGSLAQ
HHHHHHHHEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCHHEECCCCCCC
PRDFARDLRALVAKQSLPGYELSIERWPGEPEILAFRPVPQTARG
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SSPSLPLRQRPTQQREQLDLFRALPAEDMAPRDAQDLMAYPFFSLAKSRRTAPIDFRSG
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCC
KITIRVEGTQEHGIATIWDADILIWAASQIVEARDAGIQPSRRMQATPYEILRFIGRGTS
EEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC
LRDYQRLKAAFDRLQSTTVATSIRETTGRRLHRFSWINEWKELADANGKPLGIELILPDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCH
FYAGVLDAALVLTIDPTYFRLTGGIERWLYRLVRKHGGRQANGWQFDVPYLYRKSGSLAQ
HHHHHHHHEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCHHEECCCCCCC
PRDFARDLRALVAKQSLPGYELSIERWPGEPEILAFRPVPQTARG
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]