| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919704
Identifier: 117919704
GI number: 117919704
Start: 1471427
End: 1473172
Strand: Reverse
Name: 117919704
Synonym: Shewana3_1255
Alternate gene names: NA
Gene position: 1473172-1471427 (Counterclockwise)
Preceding gene: 117919705
Following gene: 117919703
Centisome position: 29.63
GC content: 50.69
Gene sequence:
>1746_bases ATGGGCGGTCGCGTCATCAACCTTTTCATGTGGGGATACCAAGACAGCTACAGAATTCGGATTCAGTTGCTAGCTCGCAA TGTCCTTAGGGAGTTGGGCGCACCTGCAGAGGCAGAAGTGCTTCTTGTTGGAGCACGAAGACCTAATAGCGAAAACCGGA ATCCGGTTTGCGTCGAGCCAGAAGCGGGAAAATGGCCCCTGTCGCTATTTGATGGCTTGCTCGATTCAGTCGAATCGACT TACCTCAACCACGATATGCAGAACCTTTTTTATGGTGACGAGGCAAGTATGCGGGACAAGCCTGAATGGATGCGCCGAGA TTCGGTACGCATATCTGTTGGGCAGGCTCTCAAGGTCTTCGATGCCGAGCACGACGTGGCTTCGTTCTGTGGCGAAGTCA GACGCATTGATGATTACTACATTACCCCGGTCATACAGATTCCAAACGCAACTTTTGTGCAGTTCCCGCCGTTGCCTTCA AAGCCTGTTGATAAAGGACAACAAGGAAGTGGGCTTCGCAGTTTGATACATGCAGCGATGTATGCAGTTCTTCATGAGGC TACTGAAGAGTTGCAGAGCCCTCAGCCTGGACGATTTATCCAAAACAGTATGAGAGATGCAGAAGAAATCGTACGCATTG CTGCGAAGAATTTCCTGCATACTCCAGGACTCTCAATCGAGAAGCGGTATATTCATGCCGATCTTTTCGATGTAATGAAC CTTATCTCATCTCTCATGTATGAAGGGGCGAAAGGTGTTGGTCAGCTTACTCTCGTCGACCCCGAGAACGATGCGATCGA ATTCCTAGCAAAGTTTGCTCAGCCGGTTCCTTTTCGTGAGCCACGATGGGCGCGGAAGGTCTTGCAGATGGCGACAACAG GTGTTGGCATCATTGCAGACAGTCAGCGCATTTACGGACTTGGTAAGCTGAGGGATCCGCACGATTTCAGCGCACAGGAT GCGTTCACAGTTGCTTTTATCGATCACTATCACTGGGAGCTGCGTTGTGGCAATCAAGTACTGCTGCGCAGTCACTATGC TGTGCCCAAGCTTCCGCAGGAACCTTTCGACAAGGCTGCCTTCCTCTCAAACTATACTCGCCTGTTTCCACAAGCTTCAC GGGAAAATGGATTGCACCTATGGAGCCTATTGCTGGCCCAGACTAGACAAGATTACGGCAGCATGATTGTCGTCGCTGCC GACGCAGCCAGCGAAGCACGACGGCTTAGAAAGCAGGGTACCTGTATAGATCCAACCTTGCTTTCTGAATCGTTGATGCA GAGTGTCAGTGGAATCGACGGTACCATACTGCTCGACCCCTCTGGCTTTTGCCATGCCATCGGGATCATTCTCGATGGCG AGGCGACCGATCAATGTACGCCTTCAAGGGGCTCTCGATACAATTCCGGCGTTCGCTACGTAACAGCGAGCTGTCCCAGA AGGCTTGCCATTGTCGTATCTGATGATCGCACCGTCGACATTATTCCTCGGCTCCGACCGCTGGTTAGCCGTGCGAAGAT AGAACAGCATATAGCTCGGTTAGAAGCGGCGACACTCGACAACTATCACGATTCTCGAAACTGGCTGGACGAACATCGGT TTTACATCAATAACGAGCAATGCTCTCGGATCAACAATGCAATCGAAAGATTGGATGCTCTTCCGAAGGAAGTGGGCTTG ATCTACATCGGAACGGAAAAGTTTGAATCTCATCCCGAGATGGATGAAAGCTATCTTACTGACTAG
Upstream 100 bases:
>100_bases ATCAACGCCAGCATTGACCTCTGGAATACTTGGTGAGGCACGCCAAAAAACAAGCATTCGCCGCTAGGACAATGCGGCCT GCAAGTAGGTGGAGTTAGGA
Downstream 100 bases:
>100_bases CCGATTACTGCCGCGCGATGGAGGCGTAAGCTCCACTGCAATGGGCCTCACCAACTGTAGGAATAGGAAAGAGTTTTGAA AGTAGAGGAAAGCATTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MGGRVINLFMWGYQDSYRIRIQLLARNVLRELGAPAEAEVLLVGARRPNSENRNPVCVEPEAGKWPLSLFDGLLDSVEST YLNHDMQNLFYGDEASMRDKPEWMRRDSVRISVGQALKVFDAEHDVASFCGEVRRIDDYYITPVIQIPNATFVQFPPLPS KPVDKGQQGSGLRSLIHAAMYAVLHEATEELQSPQPGRFIQNSMRDAEEIVRIAAKNFLHTPGLSIEKRYIHADLFDVMN LISSLMYEGAKGVGQLTLVDPENDAIEFLAKFAQPVPFREPRWARKVLQMATTGVGIIADSQRIYGLGKLRDPHDFSAQD AFTVAFIDHYHWELRCGNQVLLRSHYAVPKLPQEPFDKAAFLSNYTRLFPQASRENGLHLWSLLLAQTRQDYGSMIVVAA DAASEARRLRKQGTCIDPTLLSESLMQSVSGIDGTILLDPSGFCHAIGIILDGEATDQCTPSRGSRYNSGVRYVTASCPR RLAIVVSDDRTVDIIPRLRPLVSRAKIEQHIARLEAATLDNYHDSRNWLDEHRFYINNEQCSRINNAIERLDALPKEVGL IYIGTEKFESHPEMDESYLTD
Sequences:
>Translated_581_residues MGGRVINLFMWGYQDSYRIRIQLLARNVLRELGAPAEAEVLLVGARRPNSENRNPVCVEPEAGKWPLSLFDGLLDSVEST YLNHDMQNLFYGDEASMRDKPEWMRRDSVRISVGQALKVFDAEHDVASFCGEVRRIDDYYITPVIQIPNATFVQFPPLPS KPVDKGQQGSGLRSLIHAAMYAVLHEATEELQSPQPGRFIQNSMRDAEEIVRIAAKNFLHTPGLSIEKRYIHADLFDVMN LISSLMYEGAKGVGQLTLVDPENDAIEFLAKFAQPVPFREPRWARKVLQMATTGVGIIADSQRIYGLGKLRDPHDFSAQD AFTVAFIDHYHWELRCGNQVLLRSHYAVPKLPQEPFDKAAFLSNYTRLFPQASRENGLHLWSLLLAQTRQDYGSMIVVAA DAASEARRLRKQGTCIDPTLLSESLMQSVSGIDGTILLDPSGFCHAIGIILDGEATDQCTPSRGSRYNSGVRYVTASCPR RLAIVVSDDRTVDIIPRLRPLVSRAKIEQHIARLEAATLDNYHDSRNWLDEHRFYINNEQCSRINNAIERLDALPKEVGL IYIGTEKFESHPEMDESYLTD >Mature_580_residues GGRVINLFMWGYQDSYRIRIQLLARNVLRELGAPAEAEVLLVGARRPNSENRNPVCVEPEAGKWPLSLFDGLLDSVESTY LNHDMQNLFYGDEASMRDKPEWMRRDSVRISVGQALKVFDAEHDVASFCGEVRRIDDYYITPVIQIPNATFVQFPPLPSK PVDKGQQGSGLRSLIHAAMYAVLHEATEELQSPQPGRFIQNSMRDAEEIVRIAAKNFLHTPGLSIEKRYIHADLFDVMNL ISSLMYEGAKGVGQLTLVDPENDAIEFLAKFAQPVPFREPRWARKVLQMATTGVGIIADSQRIYGLGKLRDPHDFSAQDA FTVAFIDHYHWELRCGNQVLLRSHYAVPKLPQEPFDKAAFLSNYTRLFPQASRENGLHLWSLLLAQTRQDYGSMIVVAAD AASEARRLRKQGTCIDPTLLSESLMQSVSGIDGTILLDPSGFCHAIGIILDGEATDQCTPSRGSRYNSGVRYVTASCPRR LAIVVSDDRTVDIIPRLRPLVSRAKIEQHIARLEAATLDNYHDSRNWLDEHRFYINNEQCSRINNAIERLDALPKEVGLI YIGTEKFESHPEMDESYLTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65532; Mature: 65401
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRVINLFMWGYQDSYRIRIQLLARNVLRELGAPAEAEVLLVGARRPNSENRNPVCVEP CCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECC EAGKWPLSLFDGLLDSVESTYLNHDMQNLFYGDEASMRDKPEWMRRDSVRISVGQALKVF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEECCCHHHHH DAEHDVASFCGEVRRIDDYYITPVIQIPNATFVQFPPLPSKPVDKGQQGSGLRSLIHAAM CCCHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH YAVLHEATEELQSPQPGRFIQNSMRDAEEIVRIAAKNFLHTPGLSIEKRYIHADLFDVMN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LISSLMYEGAKGVGQLTLVDPENDAIEFLAKFAQPVPFREPRWARKVLQMATTGVGIIAD HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEC SQRIYGLGKLRDPHDFSAQDAFTVAFIDHYHWELRCGNQVLLRSHYAVPKLPQEPFDKAA CCCEEECCCCCCCCCCCCCCCEEEEEEECEEEEEECCCEEEECCCCCCCCCCCCCCHHHH FLSNYTRLFPQASRENGLHLWSLLLAQTRQDYGSMIVVAADAASEARRLRKQGTCIDPTL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCHHH LSESLMQSVSGIDGTILLDPSGFCHAIGIILDGEATDQCTPSRGSRYNSGVRYVTASCPR HHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC RLAIVVSDDRTVDIIPRLRPLVSRAKIEQHIARLEAATLDNYHDSRNWLDEHRFYINNEQ EEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCHH CSRINNAIERLDALPKEVGLIYIGTEKFESHPEMDESYLTD HHHHHHHHHHHHCCHHHCCEEEEECHHHCCCCCCCHHHCCC >Mature Secondary Structure GGRVINLFMWGYQDSYRIRIQLLARNVLRELGAPAEAEVLLVGARRPNSENRNPVCVEP CCEEEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECC EAGKWPLSLFDGLLDSVESTYLNHDMQNLFYGDEASMRDKPEWMRRDSVRISVGQALKVF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEECCCHHHHH DAEHDVASFCGEVRRIDDYYITPVIQIPNATFVQFPPLPSKPVDKGQQGSGLRSLIHAAM CCCHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH YAVLHEATEELQSPQPGRFIQNSMRDAEEIVRIAAKNFLHTPGLSIEKRYIHADLFDVMN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LISSLMYEGAKGVGQLTLVDPENDAIEFLAKFAQPVPFREPRWARKVLQMATTGVGIIAD HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEC SQRIYGLGKLRDPHDFSAQDAFTVAFIDHYHWELRCGNQVLLRSHYAVPKLPQEPFDKAA CCCEEECCCCCCCCCCCCCCCEEEEEEECEEEEEECCCEEEECCCCCCCCCCCCCCHHHH FLSNYTRLFPQASRENGLHLWSLLLAQTRQDYGSMIVVAADAASEARRLRKQGTCIDPTL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCHHH LSESLMQSVSGIDGTILLDPSGFCHAIGIILDGEATDQCTPSRGSRYNSGVRYVTASCPR HHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC RLAIVVSDDRTVDIIPRLRPLVSRAKIEQHIARLEAATLDNYHDSRNWLDEHRFYINNEQ EEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCHH CSRINNAIERLDALPKEVGLIYIGTEKFESHPEMDESYLTD HHHHHHHHHHHHCCHHHCCEEEEECHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA