| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919696
Identifier: 117919696
GI number: 117919696
Start: 1460685
End: 1461503
Strand: Direct
Name: 117919696
Synonym: Shewana3_1247
Alternate gene names: NA
Gene position: 1460685-1461503 (Clockwise)
Preceding gene: 117919695
Following gene: 117919697
Centisome position: 29.38
GC content: 54.82
Gene sequence:
>819_bases GTGGCGTCACAAATTGCCCCATTCAGTTCTCAGCACCTGGAAGCTGCCTGCCGCGTTCTTGCCGATACGGCACAAGGTCT GACCGGCACGCAAATCGGGCGTTTGTTGCAAGAAACCCAGGTAGCCGACCCCTCACCAGATATGACCAAGTGGAAACGGC TGTTCAATGCGTTGGCAGGCGCTCAGAACCAGCATCAGGTTGGCAACCATCTCATCATGTTCATCAATCGCGCGATGAAT CCGGTGAGTTACGCAAGCGATCCCGGAACATTTGCTTGGCGCCGTGATGAACTCAATGTTGTTTTGGCGTTCTCGGGTTT CTACGTGCGTGAAGATGGCAAAGTCGGATATGCCGATAAGGCCAATACGCTGGACGAAGCCCGTGCACGAGCCGGGCGAC TCAAGGCGGCGCTGGAAAGTCGCGCTGTACATGTAGAAGTCCTGAACTACTGTCGCGTAGAACTCATGGACGAGAACTAT TTTCACGCGGTATTTGAAGCGACCAAGGGCGTTGCCGAGCGGATTCGCCAGCTCTCGGGGCTGAGTGGCGATGGTGCTGA CCTTGTGAATAAGGCATTTGGCGGTCAGCAACCTGTACTTGTCTTGAAGGCGCTGAGTACGGAGTCTGAAAAAAGCGAGC AGAAAGGCTTTGTGAACCTGCTGATCGGTCTGTTTGGAGCGGTACGCAATCCGCTTGCCCATGCCGCGAAAACGAATTGG CCTATGTCCGAACAGGACGCCTTGGACATCCTGACGCTGGTATCGCTGATTCATCGTAAGTTGGATGGCGCCACGAGACT AACTGCCGTATCGGCGTAA
Upstream 100 bases:
>100_bases GAAACGCGTCCAGCCGGTCCTGCGCTCAAGCTGCTTAATGTCATCGCCGACAAAGGCTTGCAGGCCATTATCTGATGAGT GTGCGACGGAGATGTAGATA
Downstream 100 bases:
>100_bases CCGGGGAGAGAAAATGGACGAGGCGATTGTAGTTTTCTCCCGGAAAGGAATTTTCCAAACCACAATCTTGGCACGTGATG TACGAAGCCGTGAACATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MASQIAPFSSQHLEAACRVLADTAQGLTGTQIGRLLQETQVADPSPDMTKWKRLFNALAGAQNQHQVGNHLIMFINRAMN PVSYASDPGTFAWRRDELNVVLAFSGFYVREDGKVGYADKANTLDEARARAGRLKAALESRAVHVEVLNYCRVELMDENY FHAVFEATKGVAERIRQLSGLSGDGADLVNKAFGGQQPVLVLKALSTESEKSEQKGFVNLLIGLFGAVRNPLAHAAKTNW PMSEQDALDILTLVSLIHRKLDGATRLTAVSA
Sequences:
>Translated_272_residues MASQIAPFSSQHLEAACRVLADTAQGLTGTQIGRLLQETQVADPSPDMTKWKRLFNALAGAQNQHQVGNHLIMFINRAMN PVSYASDPGTFAWRRDELNVVLAFSGFYVREDGKVGYADKANTLDEARARAGRLKAALESRAVHVEVLNYCRVELMDENY FHAVFEATKGVAERIRQLSGLSGDGADLVNKAFGGQQPVLVLKALSTESEKSEQKGFVNLLIGLFGAVRNPLAHAAKTNW PMSEQDALDILTLVSLIHRKLDGATRLTAVSA >Mature_271_residues ASQIAPFSSQHLEAACRVLADTAQGLTGTQIGRLLQETQVADPSPDMTKWKRLFNALAGAQNQHQVGNHLIMFINRAMNP VSYASDPGTFAWRRDELNVVLAFSGFYVREDGKVGYADKANTLDEARARAGRLKAALESRAVHVEVLNYCRVELMDENYF HAVFEATKGVAERIRQLSGLSGDGADLVNKAFGGQQPVLVLKALSTESEKSEQKGFVNLLIGLFGAVRNPLAHAAKTNWP MSEQDALDILTLVSLIHRKLDGATRLTAVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29663; Mature: 29532
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQIAPFSSQHLEAACRVLADTAQGLTGTQIGRLLQETQVADPSPDMTKWKRLFNALAG CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC AQNQHQVGNHLIMFINRAMNPVSYASDPGTFAWRRDELNVVLAFSGFYVREDGKVGYADK CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCEEEECCCCCCCCCC ANTLDEARARAGRLKAALESRAVHVEVLNYCRVELMDENYFHAVFEATKGVAERIRQLSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC LSGDGADLVNKAFGGQQPVLVLKALSTESEKSEQKGFVNLLIGLFGAVRNPLAHAAKTNW CCCCCHHHHHHHCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PMSEQDALDILTLVSLIHRKLDGATRLTAVSA CCCHHHHHHHHHHHHHHHHHHCCCHHEEEECC >Mature Secondary Structure ASQIAPFSSQHLEAACRVLADTAQGLTGTQIGRLLQETQVADPSPDMTKWKRLFNALAG CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC AQNQHQVGNHLIMFINRAMNPVSYASDPGTFAWRRDELNVVLAFSGFYVREDGKVGYADK CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCEEEECCCCCCCCCC ANTLDEARARAGRLKAALESRAVHVEVLNYCRVELMDENYFHAVFEATKGVAERIRQLSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC LSGDGADLVNKAFGGQQPVLVLKALSTESEKSEQKGFVNLLIGLFGAVRNPLAHAAKTNW CCCCCHHHHHHHCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PMSEQDALDILTLVSLIHRKLDGATRLTAVSA CCCHHHHHHHHHHHHHHHHHHCCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA