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The map label for this gene is relA [H]

Identifier: 117919560

GI number: 117919560

Start: 1306864

End: 1309071

Strand: Direct

Name: relA [H]

Synonym: Shewana3_1111

Alternate gene names: 117919560

Gene position: 1306864-1309071 (Clockwise)

Preceding gene: 117919559

Following gene: 117919561

Centisome position: 26.28

GC content: 50.23

Gene sequence:

>2208_bases
ATGGTCTCTGTTCGCGAAGCGCACTTTAATGATCCCGATTTTCATCTTGAAGATTGGGTGGCTCGCTATGTCAGTCATGT
CGAGGAGGCCCAGACCTTACTCACCCTGATTGCACAGGTGGAAGCCTTACCCGCTAAGAGTCCTGCCGCGAAAAGAGAAC
TGCTCGAACGTGCCCGTGAGATGATTGAAATCCTCGCGCCATTGAACATGGATATCGAGACGCTGCAAGCGGCCATTCTG
TTTGTGGTGTTTGATGCTGGCTTACTAAATGAAGAGGCGATCAAAGAAAAATTTGGCGAGCCGCTGGCGCGGTTAGTTGC
CAGCGTCGTGACCATGGATGCGATTGGCGCGTTAAAAATCAATCCCAATAGCCGCTCAAGCGAGCCGCAAATCGACAATA
TCCGCCGCATGTTGCTGGCAATGGTCGAAGACGTGCGCGCCGTGGTGATAAAACTAGCCGAGCGTGTTTGTTTGCTTCGC
GCCGTGAAAAATGCCGATGAAGAAACCCGTGTCTTATTGGCCCGCGAAATTGCCGACATCTATGCGCCGCTCGCGAACCG
TTTGGGTATTGGTCAGTTAAAGTGGGAATTAGAAGATATTTCCTTCCGTTATCTGCATCCAGATACCTACAAGGACATTG
CGAAACAGCTAGATGGTAAGCGGTTAGACCGCGAAGTCTATATCGAAAAATTTGTCGAGCAGTTGCAGCAGCGCCTCGAT
GAGGATCATATCCGCGCTAAGGTCTATGGTCGTCCAAAACATATCTACAGCATTTGGCGCAAAATGAAGGGCAAACACCT
CAAGTTTGATGAGTTGTTTGACGTGCGCGCCGTGCGGATTGTCACCGAACGTTTGCAGGATTGCTACGGCGCCTTAGGGG
TCGTGCACACTCTTTGGCATCATATTCCACGCGAGTTTGATGACTACGTGGCCAACCCTAAACCTAACGGTTATCAATCC
ATCCATACTGTTGTGGTGGGGCCAGAAGGTAAAACCGTTGAAATTCAAATTCGTACCCAAGATATGCATGAAGATGCAGA
GCTGGGTGTTGCCGCGCACTGGAAATACAAGGAAGGTAATCACTCCGGCAAACAGAGCGGCTACGAAGAAAAAATCAATT
GGCTGCGTAAAATTCTGCAATGGCAGGAAGACGTGGTCGAAAGCGGCAATTTGGTCGAAGAAGTCCGCAGCCAAGTGTTT
GAAGATAGAGTCTATGTCTTTACTCCAAGTGGTGAAGTCGTTGACTTGCCACTGGGTTCAACCGTGCTCGACTTTGCCTA
CTATATTCACTCGCAGGTTGGCCATAAGTGTATCGGCGCCAAGGTCGATGGCCGGATTGTACCGTTTACCTACCAGGTTG
AAACGGGCGAGCGCATCGAGATTATCACCTCGAAGCACCCCAATCCTAAGCGCGATTGGCTCAATCCAAACTTAGGCTAT
ATCCGCACATCGCGGGCGCGTTCGAAAATTCAGCATTGGTTTAAGCAGCAAGACCGCGATAAAAACATTATCGCCGGTAA
AGAAATGCTCGAAGCCGAGCTGGCGCGAGTCAGCCTTAAAATCAAAGATGCTGCCATCGCCGTTGAGCGTTTTAATATGG
CGAGTATGGACGACTTGCTTGCCGCCATCGGCGGCGGTGATGTGCGTTTACATCAGGTTGTTAACCATATTCAAAGCAAG
TTGCGCCTCGATGAGGCGAGCGAAGAAGATGCGGTTGAAGAATTAGTTAAGAAGAGCCAACCTAAATCTGGCACCAATAG
CCGAGGACAGGTGGAAGTGAATGGCGTGGGTAATTTACTTAGCCATATCGCCCGTTGCTGCCAACCCGTGCCTGGGGATG
AGATTTTAGGCTTTATCACCAAAGGGCGCGGTATTTCTGTGCATCGCTCCGACTGTGAGCAGGTGAAAGAGTTAATGCGC
GTTCACCCAGAACGCGGCGTCGATGTGGTTTGGGGCGAAAACTATTCAGGTGGTTATCGCATGCGTCTGCGCGTCTTAGC
CCATGATCGCAGCGGATTATTGCGGGATCTCACCTCGGTACTAGCCGCCGAAAAGTCCAATGTGCTTGCCATGAGCTCCT
CATCGGATATTAAGAATCAGACGGCAGCCATTGAGCTGGAATTAGAGCTTTATAATCTTGATGGTTTATCGCGGGTGTTA
TCTAAGCTCTCCCAAGTCGATAGCGTGATAGAAGCGCGCAGATTGTAA

Upstream 100 bases:

>100_bases
GTTTCGTCTCGTTGGGTTTGACAAGTCCGTGCCAATGCTGAAGATAGGAGTGCCGAGGTGGTGCCACTTTTCTCTGAGCA
CGAATAAGGAAATAAATTAG

Downstream 100 bases:

>100_bases
TTCTCGATTCTGTGATTATGCGTTGTAAAAAAGCGGTAGGGCATAAAGCGCTACCGCTTTTTTATTTTCAGCCCTAAACC
ACCTTCTTCAGAAGGTGATT

Product: (p)ppGpp synthetase I, SpoT/RelA

Products: NA

Alternate protein names: (p)ppGpp synthase; ATP:GTP 3'-pyrophosphotransferase; ppGpp synthase I [H]

Number of amino acids: Translated: 735; Mature: 735

Protein sequence:

>735_residues
MVSVREAHFNDPDFHLEDWVARYVSHVEEAQTLLTLIAQVEALPAKSPAAKRELLERAREMIEILAPLNMDIETLQAAIL
FVVFDAGLLNEEAIKEKFGEPLARLVASVVTMDAIGALKINPNSRSSEPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLR
AVKNADEETRVLLAREIADIYAPLANRLGIGQLKWELEDISFRYLHPDTYKDIAKQLDGKRLDREVYIEKFVEQLQQRLD
EDHIRAKVYGRPKHIYSIWRKMKGKHLKFDELFDVRAVRIVTERLQDCYGALGVVHTLWHHIPREFDDYVANPKPNGYQS
IHTVVVGPEGKTVEIQIRTQDMHEDAELGVAAHWKYKEGNHSGKQSGYEEKINWLRKILQWQEDVVESGNLVEEVRSQVF
EDRVYVFTPSGEVVDLPLGSTVLDFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERIEIITSKHPNPKRDWLNPNLGY
IRTSRARSKIQHWFKQQDRDKNIIAGKEMLEAELARVSLKIKDAAIAVERFNMASMDDLLAAIGGGDVRLHQVVNHIQSK
LRLDEASEEDAVEELVKKSQPKSGTNSRGQVEVNGVGNLLSHIARCCQPVPGDEILGFITKGRGISVHRSDCEQVKELMR
VHPERGVDVVWGENYSGGYRMRLRVLAHDRSGLLRDLTSVLAAEKSNVLAMSSSSDIKNQTAAIELELELYNLDGLSRVL
SKLSQVDSVIEARRL

Sequences:

>Translated_735_residues
MVSVREAHFNDPDFHLEDWVARYVSHVEEAQTLLTLIAQVEALPAKSPAAKRELLERAREMIEILAPLNMDIETLQAAIL
FVVFDAGLLNEEAIKEKFGEPLARLVASVVTMDAIGALKINPNSRSSEPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLR
AVKNADEETRVLLAREIADIYAPLANRLGIGQLKWELEDISFRYLHPDTYKDIAKQLDGKRLDREVYIEKFVEQLQQRLD
EDHIRAKVYGRPKHIYSIWRKMKGKHLKFDELFDVRAVRIVTERLQDCYGALGVVHTLWHHIPREFDDYVANPKPNGYQS
IHTVVVGPEGKTVEIQIRTQDMHEDAELGVAAHWKYKEGNHSGKQSGYEEKINWLRKILQWQEDVVESGNLVEEVRSQVF
EDRVYVFTPSGEVVDLPLGSTVLDFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERIEIITSKHPNPKRDWLNPNLGY
IRTSRARSKIQHWFKQQDRDKNIIAGKEMLEAELARVSLKIKDAAIAVERFNMASMDDLLAAIGGGDVRLHQVVNHIQSK
LRLDEASEEDAVEELVKKSQPKSGTNSRGQVEVNGVGNLLSHIARCCQPVPGDEILGFITKGRGISVHRSDCEQVKELMR
VHPERGVDVVWGENYSGGYRMRLRVLAHDRSGLLRDLTSVLAAEKSNVLAMSSSSDIKNQTAAIELELELYNLDGLSRVL
SKLSQVDSVIEARRL
>Mature_735_residues
MVSVREAHFNDPDFHLEDWVARYVSHVEEAQTLLTLIAQVEALPAKSPAAKRELLERAREMIEILAPLNMDIETLQAAIL
FVVFDAGLLNEEAIKEKFGEPLARLVASVVTMDAIGALKINPNSRSSEPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLR
AVKNADEETRVLLAREIADIYAPLANRLGIGQLKWELEDISFRYLHPDTYKDIAKQLDGKRLDREVYIEKFVEQLQQRLD
EDHIRAKVYGRPKHIYSIWRKMKGKHLKFDELFDVRAVRIVTERLQDCYGALGVVHTLWHHIPREFDDYVANPKPNGYQS
IHTVVVGPEGKTVEIQIRTQDMHEDAELGVAAHWKYKEGNHSGKQSGYEEKINWLRKILQWQEDVVESGNLVEEVRSQVF
EDRVYVFTPSGEVVDLPLGSTVLDFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERIEIITSKHPNPKRDWLNPNLGY
IRTSRARSKIQHWFKQQDRDKNIIAGKEMLEAELARVSLKIKDAAIAVERFNMASMDDLLAAIGGGDVRLHQVVNHIQSK
LRLDEASEEDAVEELVKKSQPKSGTNSRGQVEVNGVGNLLSHIARCCQPVPGDEILGFITKGRGISVHRSDCEQVKELMR
VHPERGVDVVWGENYSGGYRMRLRVLAHDRSGLLRDLTSVLAAEKSNVLAMSSSSDIKNQTAAIELELELYNLDGLSRVL
SKLSQVDSVIEARRL

Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the formation of pppGpp which i

COG id: COG0317

COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

Organism=Escherichia coli, GI1789147, Length=746, Percent_Identity=59.9195710455764, Blast_Score=897, Evalue=0.0,
Organism=Escherichia coli, GI1790082, Length=634, Percent_Identity=34.8580441640379, Blast_Score=409, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR012675
- InterPro:   IPR007685
- InterPro:   IPR004811
- InterPro:   IPR004095
- InterPro:   IPR012676 [H]

Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 83382; Mature: 83382

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVREAHFNDPDFHLEDWVARYVSHVEEAQTLLTLIAQVEALPAKSPAAKRELLERARE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
MIEILAPLNMDIETLQAAILFVVFDAGLLNEEAIKEKFGEPLARLVASVVTMDAIGALKI
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCEEEE
NPNSRSSEPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLRAVKNADEETRVLLAREIADI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YAPLANRLGIGQLKWELEDISFRYLHPDTYKDIAKQLDGKRLDREVYIEKFVEQLQQRLD
HHHHHHCCCCCCEEEEEECCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
EDHIRAKVYGRPKHIYSIWRKMKGKHLKFDELFDVRAVRIVTERLQDCYGALGVVHTLWH
HHHHEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIPREFDDYVANPKPNGYQSIHTVVVGPEGKTVEIQIRTQDMHEDAELGVAAHWKYKEGN
HHCHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCHHCCEEEEEEECCCC
HSGKQSGYEEKINWLRKILQWQEDVVESGNLVEEVRSQVFEDRVYVFTPSGEVVDLPLGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCEEECCCCH
TVLDFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERIEIITSKHPNPKRDWLNPNLGY
HHHHHHHHHHHHHCCHHCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC
IRTSRARSKIQHWFKQQDRDKNIIAGKEMLEAELARVSLKIKDAAIAVERFNMASMDDLL
EECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCHHHHH
AAIGGGDVRLHQVVNHIQSKLRLDEASEEDAVEELVKKSQPKSGTNSRGQVEVNGVGNLL
HHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHH
SHIARCCQPVPGDEILGFITKGRGISVHRSDCEQVKELMRVHPERGVDVVWGENYSGGYR
HHHHHHCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEE
MRLRVLAHDRSGLLRDLTSVLAAEKSNVLAMSSSSDIKNQTAAIELELELYNLDGLSRVL
EEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEEECCCHHHHHH
SKLSQVDSVIEARRL
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSVREAHFNDPDFHLEDWVARYVSHVEEAQTLLTLIAQVEALPAKSPAAKRELLERARE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
MIEILAPLNMDIETLQAAILFVVFDAGLLNEEAIKEKFGEPLARLVASVVTMDAIGALKI
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCEEEE
NPNSRSSEPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLRAVKNADEETRVLLAREIADI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YAPLANRLGIGQLKWELEDISFRYLHPDTYKDIAKQLDGKRLDREVYIEKFVEQLQQRLD
HHHHHHCCCCCCEEEEEECCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
EDHIRAKVYGRPKHIYSIWRKMKGKHLKFDELFDVRAVRIVTERLQDCYGALGVVHTLWH
HHHHEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIPREFDDYVANPKPNGYQSIHTVVVGPEGKTVEIQIRTQDMHEDAELGVAAHWKYKEGN
HHCHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCHHCCEEEEEEECCCC
HSGKQSGYEEKINWLRKILQWQEDVVESGNLVEEVRSQVFEDRVYVFTPSGEVVDLPLGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCEEECCCCH
TVLDFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERIEIITSKHPNPKRDWLNPNLGY
HHHHHHHHHHHHHCCHHCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC
IRTSRARSKIQHWFKQQDRDKNIIAGKEMLEAELARVSLKIKDAAIAVERFNMASMDDLL
EECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCHHHHH
AAIGGGDVRLHQVVNHIQSKLRLDEASEEDAVEELVKKSQPKSGTNSRGQVEVNGVGNLL
HHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHH
SHIARCCQPVPGDEILGFITKGRGISVHRSDCEQVKELMRVHPERGVDVVWGENYSGGYR
HHHHHHCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEE
MRLRVLAHDRSGLLRDLTSVLAAEKSNVLAMSSSSDIKNQTAAIELELELYNLDGLSRVL
EEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEEECCCHHHHHH
SKLSQVDSVIEARRL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]