| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919537
Identifier: 117919537
GI number: 117919537
Start: 1281972
End: 1282307
Strand: Direct
Name: 117919537
Synonym: Shewana3_1088
Alternate gene names: NA
Gene position: 1281972-1282307 (Clockwise)
Preceding gene: 117919536
Following gene: 117919540
Centisome position: 25.78
GC content: 44.94
Gene sequence:
>336_bases ATGAGTGATAGCTTGATGATGAAATATGGTGCCGTTTGTCTGTTGCTGTTATGGGGGCTTCAATGGCCTGCGATGGCGAC AGAAAAAGAGAAGCGACAGGATTACAAATGCTATTTAGAAACGAATCAAGGAGTTAAATTGATGCGTTTCTCCTGGTTTG AATCTAAAGTCGAGCAGTATCAGCTGTCTTTACCCGGAACAAAATTACCCCGTTTACCGCAGGATAAGCCGATAGCGCTC TATGTTAAGACGGTGCTGGAATGCGTGAAAAAGACGGAGAGTTTTACCCTCGAAGAGGCCAAGCAAGCCGAGTTTGCTCC TGAAAACCAAGGTTAA
Upstream 100 bases:
>100_bases ACTTGTGAGAGTGGTAATCCTAAGTGTATCGGCAGTGGTCCCAAGGCAAACAAGATTTACTACTACGTAGATCAATGACG CAAAGCCTTAATAAATCAAT
Downstream 100 bases:
>100_bases CCGATTTTATAAGCATTTAAAAAGACTTAGAAAATCGCTTTGTACTCAGGGCTAATATATTACGCCTTAGGTAGTAAACT TCCTAAGGCGTATGCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQYQLSLPGTKLPRLPQDKPIAL YVKTVLECVKKTESFTLEEAKQAEFAPENQG
Sequences:
>Translated_111_residues MSDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQYQLSLPGTKLPRLPQDKPIAL YVKTVLECVKKTESFTLEEAKQAEFAPENQG >Mature_110_residues SDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQYQLSLPGTKLPRLPQDKPIALY VKTVLECVKKTESFTLEEAKQAEFAPENQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12872; Mature: 12741
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQY CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHH QLSLPGTKLPRLPQDKPIALYVKTVLECVKKTESFTLEEAKQAEFAPENQG HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC >Mature Secondary Structure SDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQY CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHH QLSLPGTKLPRLPQDKPIALYVKTVLECVKKTESFTLEEAKQAEFAPENQG HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA