Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919537

Identifier: 117919537

GI number: 117919537

Start: 1281972

End: 1282307

Strand: Direct

Name: 117919537

Synonym: Shewana3_1088

Alternate gene names: NA

Gene position: 1281972-1282307 (Clockwise)

Preceding gene: 117919536

Following gene: 117919540

Centisome position: 25.78

GC content: 44.94

Gene sequence:

>336_bases
ATGAGTGATAGCTTGATGATGAAATATGGTGCCGTTTGTCTGTTGCTGTTATGGGGGCTTCAATGGCCTGCGATGGCGAC
AGAAAAAGAGAAGCGACAGGATTACAAATGCTATTTAGAAACGAATCAAGGAGTTAAATTGATGCGTTTCTCCTGGTTTG
AATCTAAAGTCGAGCAGTATCAGCTGTCTTTACCCGGAACAAAATTACCCCGTTTACCGCAGGATAAGCCGATAGCGCTC
TATGTTAAGACGGTGCTGGAATGCGTGAAAAAGACGGAGAGTTTTACCCTCGAAGAGGCCAAGCAAGCCGAGTTTGCTCC
TGAAAACCAAGGTTAA

Upstream 100 bases:

>100_bases
ACTTGTGAGAGTGGTAATCCTAAGTGTATCGGCAGTGGTCCCAAGGCAAACAAGATTTACTACTACGTAGATCAATGACG
CAAAGCCTTAATAAATCAAT

Downstream 100 bases:

>100_bases
CCGATTTTATAAGCATTTAAAAAGACTTAGAAAATCGCTTTGTACTCAGGGCTAATATATTACGCCTTAGGTAGTAAACT
TCCTAAGGCGTATGCTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQYQLSLPGTKLPRLPQDKPIAL
YVKTVLECVKKTESFTLEEAKQAEFAPENQG

Sequences:

>Translated_111_residues
MSDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQYQLSLPGTKLPRLPQDKPIAL
YVKTVLECVKKTESFTLEEAKQAEFAPENQG
>Mature_110_residues
SDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQYQLSLPGTKLPRLPQDKPIALY
VKTVLECVKKTESFTLEEAKQAEFAPENQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12872; Mature: 12741

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHH
QLSLPGTKLPRLPQDKPIALYVKTVLECVKKTESFTLEEAKQAEFAPENQG
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDSLMMKYGAVCLLLLWGLQWPAMATEKEKRQDYKCYLETNQGVKLMRFSWFESKVEQY
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHH
QLSLPGTKLPRLPQDKPIALYVKTVLECVKKTESFTLEEAKQAEFAPENQG
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA