| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919031
Identifier: 117919031
GI number: 117919031
Start: 678090
End: 679898
Strand: Reverse
Name: 117919031
Synonym: Shewana3_0578
Alternate gene names: NA
Gene position: 679898-678090 (Counterclockwise)
Preceding gene: 117919034
Following gene: 117919027
Centisome position: 13.67
GC content: 50.8
Gene sequence:
>1809_bases TTGCAAACACCCCAACTACAACATTTTTACATTTCCGAAGAGCAATCTATTTACTTGCTCAAAGCCAACGATGCCCGTAA GCACAAGGCATGGATCCGTTTATGTAAACAACAGTTAAGTAAGTTGGGTTATCGCGACATTGAGTTTATCGGTAAGGGCG CTTATGGCTTTGTGTTTGCAGGAATCAACCAAGCCGACGAAGCCCACGTATTTAAATTCTCAAGAATTAATCTGCCGCAG CATATTCAAGACCGTTTAGAGGAAGAAGCCTTTATGCTGTCCTTGCTCAAACACCCCAACATTCCGGGGGCGATCAAATT TGAGCGGGTTGGTAAACAAGGGATCTTAGTGATGGAGCGCGCAAAGGGTGAAGATCTCGAGCAGCTTTGCCGCCGCTTAG GCGCCCTGCCCCCAGCCATGGTGATGAGCATTGCCCGCCAACTGGCCGATATTCTCTACTATCTGCGCACGGGTAAGCCC TTAGTGCATGGCGACATAAAACCTTCAAACCTTGTCTATGATATTGAAAGTCAGCACTTATCCCTTATCGATTGGGGCTC AGCGGTATTTGCGCAACGGGATGAACATAACAAGGCCGTTGAAGACAATGTGATGACGCTGATGTCGAGCGATCAGCAGC ACACTAATGCCCGCATGGGAGACGTGTATTTTATCGGTGAAGAGCAGCTAAATGGCGCGCTCTCCAGCCCGCGTTTCGAC GAGCAAGGCGTGGCGGCGACCTTGTATGCCTTGGCCTCTGGACAGGCGAGTCGCTTCGGCGCACAGGTGATCCCGCCCAC CAGCATAGGCTTACCCATGGAGTTGGCGCGCACCTTGGAAGGCATGCTCAGTAGCGATGCCGTGCAACGCAATCTGGCGG GGGATTATTTTCTCAAAAGCATGCGCCACAGCCATAGAATCCATTTACCCGAGCTGCCCAAAACCGAACTGCTGGGCGAA ATCCCCGTTTGGGTGCAATCCCGCGAGAAAGATGTCGAAACCGTCAGTTACAGCTCGCGTAAATCCTTTTTAAAGGAACA TAACGCGCAGGATCCCATCGCTAAGATGGATGACATTCAACTCGAAAAATACTATCGCAATTTCTTAGCCGGCATGGGCG ATACCGAAAAGGGCTTTATCGCCGCCGTGGGTCGCCTCGGCCAATACCCCATAGTGGGCGGCCTTGCCATCCATTGGCAA GAAACCGGCGTGTTTATCGACTCCAACCTCGCCATTTACGATGCTAAACAAAAGAGTGCGCTCATCATCGCCGTCAATAA TATGGTGACGCTCGCGCGGGGAATTAAGCGTATCGGGGTGTTTAAGGCCTGCTTCTTTAACGCTAGGGATACACTGCATA TCGAGCGCGAAAACACCAGCGAACCCTTTGTCGCCAGCGCTGATTTGCAACTGCCCTTCGAGGTGGGTGATGTGCCGACC CTCGAAGATAAATCGCGGCTGCACTCTTACTTTGAAGACGGTAAGGACCCGGATGAGAACCTCGAACTACCGAGTGAAAT CATGGAAGAATTGGCGCGTATCAACCAGATCCATCACACGGGCTGCATCATTTTTGAGGCCCTGCCGAATCACTTAAAGA TCCACAGTTACTTAAAACTGCTCAACCCGCGCAAACAGGCGGCGTTTCGCGCCAGCCTCGACCGCATTTTGCATTATGTG GGTAAAATTCAAGGCCATGGGGTCTCGGGCTTTATGAAACTGCCCTATAAAAATACTCGCCGCTTTACCCATATTGAGCG TAAAGCCGAACATTTTTATCCTAGAAACCCAAAAGAAATAGGCGCATAA
Upstream 100 bases:
>100_bases ATCACAAGTTTATCGCAGGCAACACCAGTCACAGCATCCAACGCCGATTTGCTTATCTGCCTCGCTTACTGTTTAAATAA CCAAAACAAGGAGTCGCGCA
Downstream 100 bases:
>100_bases CGAATCACCTCGTTAGCGCCTATGATGCTGAAAACTAAGCCTAGATAGGTGAACCCGGTGGCAGTTTCAAGGGGTTAGGG ATCAGTTTGCTGTTGGCGTC
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: Protein Kinase; Non-Specific Serine/Threonine Protein Kinase; Serine/Threonine-Protein Kinase; Serine/Threonine Kinase; Serine/Threonine-Protein Kinase PrkC; TPR Repeat-Containing Serine/Threonin Protein Kinase
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MQTPQLQHFYISEEQSIYLLKANDARKHKAWIRLCKQQLSKLGYRDIEFIGKGAYGFVFAGINQADEAHVFKFSRINLPQ HIQDRLEEEAFMLSLLKHPNIPGAIKFERVGKQGILVMERAKGEDLEQLCRRLGALPPAMVMSIARQLADILYYLRTGKP LVHGDIKPSNLVYDIESQHLSLIDWGSAVFAQRDEHNKAVEDNVMTLMSSDQQHTNARMGDVYFIGEEQLNGALSSPRFD EQGVAATLYALASGQASRFGAQVIPPTSIGLPMELARTLEGMLSSDAVQRNLAGDYFLKSMRHSHRIHLPELPKTELLGE IPVWVQSREKDVETVSYSSRKSFLKEHNAQDPIAKMDDIQLEKYYRNFLAGMGDTEKGFIAAVGRLGQYPIVGGLAIHWQ ETGVFIDSNLAIYDAKQKSALIIAVNNMVTLARGIKRIGVFKACFFNARDTLHIERENTSEPFVASADLQLPFEVGDVPT LEDKSRLHSYFEDGKDPDENLELPSEIMEELARINQIHHTGCIIFEALPNHLKIHSYLKLLNPRKQAAFRASLDRILHYV GKIQGHGVSGFMKLPYKNTRRFTHIERKAEHFYPRNPKEIGA
Sequences:
>Translated_602_residues MQTPQLQHFYISEEQSIYLLKANDARKHKAWIRLCKQQLSKLGYRDIEFIGKGAYGFVFAGINQADEAHVFKFSRINLPQ HIQDRLEEEAFMLSLLKHPNIPGAIKFERVGKQGILVMERAKGEDLEQLCRRLGALPPAMVMSIARQLADILYYLRTGKP LVHGDIKPSNLVYDIESQHLSLIDWGSAVFAQRDEHNKAVEDNVMTLMSSDQQHTNARMGDVYFIGEEQLNGALSSPRFD EQGVAATLYALASGQASRFGAQVIPPTSIGLPMELARTLEGMLSSDAVQRNLAGDYFLKSMRHSHRIHLPELPKTELLGE IPVWVQSREKDVETVSYSSRKSFLKEHNAQDPIAKMDDIQLEKYYRNFLAGMGDTEKGFIAAVGRLGQYPIVGGLAIHWQ ETGVFIDSNLAIYDAKQKSALIIAVNNMVTLARGIKRIGVFKACFFNARDTLHIERENTSEPFVASADLQLPFEVGDVPT LEDKSRLHSYFEDGKDPDENLELPSEIMEELARINQIHHTGCIIFEALPNHLKIHSYLKLLNPRKQAAFRASLDRILHYV GKIQGHGVSGFMKLPYKNTRRFTHIERKAEHFYPRNPKEIGA >Mature_602_residues MQTPQLQHFYISEEQSIYLLKANDARKHKAWIRLCKQQLSKLGYRDIEFIGKGAYGFVFAGINQADEAHVFKFSRINLPQ HIQDRLEEEAFMLSLLKHPNIPGAIKFERVGKQGILVMERAKGEDLEQLCRRLGALPPAMVMSIARQLADILYYLRTGKP LVHGDIKPSNLVYDIESQHLSLIDWGSAVFAQRDEHNKAVEDNVMTLMSSDQQHTNARMGDVYFIGEEQLNGALSSPRFD EQGVAATLYALASGQASRFGAQVIPPTSIGLPMELARTLEGMLSSDAVQRNLAGDYFLKSMRHSHRIHLPELPKTELLGE IPVWVQSREKDVETVSYSSRKSFLKEHNAQDPIAKMDDIQLEKYYRNFLAGMGDTEKGFIAAVGRLGQYPIVGGLAIHWQ ETGVFIDSNLAIYDAKQKSALIIAVNNMVTLARGIKRIGVFKACFFNARDTLHIERENTSEPFVASADLQLPFEVGDVPT LEDKSRLHSYFEDGKDPDENLELPSEIMEELARINQIHHTGCIIFEALPNHLKIHSYLKLLNPRKQAAFRASLDRILHYV GKIQGHGVSGFMKLPYKNTRRFTHIERKAEHFYPRNPKEIGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68131; Mature: 68131
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00108 PROTEIN_KINASE_ST ; PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTPQLQHFYISEEQSIYLLKANDARKHKAWIRLCKQQLSKLGYRDIEFIGKGAYGFVFA CCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEE GINQADEAHVFKFSRINLPQHIQDRLEEEAFMLSLLKHPNIPGAIKFERVGKQGILVMER CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCEEEEEC AKGEDLEQLCRRLGALPPAMVMSIARQLADILYYLRTGKPLVHGDIKPSNLVYDIESQHL CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCE SLIDWGSAVFAQRDEHNKAVEDNVMTLMSSDQQHTNARMGDVYFIGEEQLNGALSSPRFD EEEECCHHHHHCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEEEHHHHCCCCCCCCCC EQGVAATLYALASGQASRFGAQVIPPTSIGLPMELARTLEGMLSSDAVQRNLAGDYFLKS CCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH MRHSHRIHLPELPKTELLGEIPVWVQSREKDVETVSYSSRKSFLKEHNAQDPIAKMDDIQ HHHCCCCCCCCCCHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LEKYYRNFLAGMGDTEKGFIAAVGRLGQYPIVGGLAIHWQETGVFIDSNLAIYDAKQKSA HHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCEEEECCEEEEECCCCCE LIIAVNNMVTLARGIKRIGVFKACFFNARDTLHIERENTSEPFVASADLQLPFEVGDVPT EEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEECCCCCC LEDKSRLHSYFEDGKDPDENLELPSEIMEELARINQIHHTGCIIFEALPNHLKIHSYLKL CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH LNPRKQAAFRASLDRILHYVGKIQGHGVSGFMKLPYKNTRRFTHIERKAEHFYPRNPKEI HCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHC GA CC >Mature Secondary Structure MQTPQLQHFYISEEQSIYLLKANDARKHKAWIRLCKQQLSKLGYRDIEFIGKGAYGFVFA CCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEE GINQADEAHVFKFSRINLPQHIQDRLEEEAFMLSLLKHPNIPGAIKFERVGKQGILVMER CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCEEEEEC AKGEDLEQLCRRLGALPPAMVMSIARQLADILYYLRTGKPLVHGDIKPSNLVYDIESQHL CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCE SLIDWGSAVFAQRDEHNKAVEDNVMTLMSSDQQHTNARMGDVYFIGEEQLNGALSSPRFD EEEECCHHHHHCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEEEHHHHCCCCCCCCCC EQGVAATLYALASGQASRFGAQVIPPTSIGLPMELARTLEGMLSSDAVQRNLAGDYFLKS CCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH MRHSHRIHLPELPKTELLGEIPVWVQSREKDVETVSYSSRKSFLKEHNAQDPIAKMDDIQ HHHCCCCCCCCCCHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LEKYYRNFLAGMGDTEKGFIAAVGRLGQYPIVGGLAIHWQETGVFIDSNLAIYDAKQKSA HHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCEEEECCEEEEECCCCCE LIIAVNNMVTLARGIKRIGVFKACFFNARDTLHIERENTSEPFVASADLQLPFEVGDVPT EEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEECCCCCC LEDKSRLHSYFEDGKDPDENLELPSEIMEELARINQIHHTGCIIFEALPNHLKIHSYLKL CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH LNPRKQAAFRASLDRILHYVGKIQGHGVSGFMKLPYKNTRRFTHIERKAEHFYPRNPKEI HCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHC GA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA