Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117918982

Identifier: 117918982

GI number: 117918982

Start: 620256

End: 622217

Strand: Reverse

Name: 117918982

Synonym: Shewana3_0528

Alternate gene names: NA

Gene position: 622217-620256 (Counterclockwise)

Preceding gene: 117918984

Following gene: 117918975

Centisome position: 12.51

GC content: 48.88

Gene sequence:

>1962_bases
ATGAAATACTCTGCCATGATGCTAAGCAGTTTACTGCTCACCAACACTGTCCTCGCTGCAGATATGCGTCCTTTTGAAGG
CACGCTGTCCCTCGAGGTGGAAGATTTTCCGGAGCATGCCATTGAAACGTTTCGTCTCCACGGTAAACAAGGCGAGGTAC
ATGATTTAGCCTTAGGAGCGACCCCTCGTTGGTTAAAACCCGGTCAAAGCGTCCGTGTGTTTGGCCATGCTAATGGCAAA
CAATTGCAGGTGAGTGATAGCAGCGTCAGCTTACTGCAAACCAATGAAACGACTTCTTCGGCTCAAACCGTCAACTCGGC
CATAACACCTATCAGTGGCAACAGAAGCGTATTAGTGGCGGAAGTCAACTTTGCGATCAATCCGATCGTAAAACTGACTG
AAGCCGAGATCCAAGATCTGTTGTTTAATCAATCTTCGGCCTTCTACGAAGAAAACTCCTATGGCGCAGTTTCCCTCTCG
GGCGACACTACCAGCCCAGTTACTGTCGATGTGGATGTCTCTGTATGTAACACAGACGCCGTCGCCTTAGCCGCTGACCA
AGAACTCAGTGCCCGTGGCTTTAATCTCAATAATTACGACCATGTTATGTACTTGATCCCGACTCACCCTAAGTGTACTT
GGTCTGGTAAGGCCAATGTGGCAGGCAAGCGTAGTTGGATCAAACGAGTACAGTTATCCACGATTAACCATGAATTGGGG
CACAACCTTGGCTTATTCCATGCCAATAAAAAGGATTGTGGTGCCGTTACCACAGCTGACAGCAGCCAATGCACTATCAC
TGAATATGGCGACTATCTCAGTGCAATGAGTGGTACTAATACACCTAAGCATTTCAATGCATTCCATAAGGAGCAATTAG
GTTGGCTGAGTGGCGATCGCATCAAAACCGTCACTGCCGATTCTCGGGTGACCCTATCTCCCGTAGAGGCTGAGGGTAAC
TTCCCCCTGCTGTTAAAAATTCCCAATGGCCAAGATTCTTCAGGTAACGAGCTGTTTTACTATGTTGAATATCGCCAGCC
AACCGGATTTGATAGCTCACTGGCCACCGAAGCTGCCGCTATGCTCAATGGCGTAAGATTACGTGAAGGCGCTAGCAACA
ATGCCGCTAGCAGCTTTTTGCTGGACCCAACACCAAACAGCAGCAGCTATGATTGGGATGACATCAGCTTGGCTCCAGGA
CAATCCTTTGAACAGCAAGGTGTCCGTATCGATGTCGTCGCATCAGACTCTTCCTCTGTCACGTTAGATGTAGTCATGCA
AAACAGTACTGCTCAGTGTATCCGTGGCACTAGCAGCTTGACGGTACAAGCGGCTGTCTCACAATTGCAACAGGGGCAAC
AAGGTTCAGTCGATTTGCTGCTCACCAACAATGACAGTAGCGCCTGCCCAGAAACCACTTACAGCCTGACAACCCAAGCC
GATGCGGGTTTATACGCAAACTTAGCAAACAACAGTGTGACACTTGCGCCACAAAGCAATCTGCATCTGACACTGTCGTT
AGAAGCGCTGCAAGCAAGCGGTAGCAATACTTGGAAAGTGATTAGCAGCAACCAAACTAGCTCACAGCAAGCGGTGAGTT
CAGGTAGCGTACTGTTAACTGCGGCAACCAGTAATACTGCGCCACTCGCTGTGAATGATGATTTCAACGATATCAGCGCG
AGCACTGTACTGAATGTGCTGGCCAATGACAGCGATTTAGATGGTGACAGCCTGTTTATCAGTGGCACTACTCAAGGACT
GAATGGAAAAGTGACTGTCAACGCTAATAATACCCTGACCTATGTGCCCTCTAAGCGCTTTAAAGGCAGTGATAGCTTTA
GCTACACCGTGAGTGATGGCAAACTGACCGCAGTCGCAACTGTCACTATCAGCCCTAGCACCACAAGCGGCGGCACGACG
GATACCAGCACAAGTACTGGTGGCAAAGGTAAAAATAGATAA

Upstream 100 bases:

>100_bases
CTCAAAAGCTGTTTGCCTTGTTAAATGGAACTTATGTCCCCTAATTGAACGTTAGTGCCCATAAGTTTCACGTTTTGCCC
TAAACCTGAAGAGATAAACA

Downstream 100 bases:

>100_bases
TATGAGCAAATAAAAAGGGCCGTAATGACGGCCCTTTTTGCTAATACACAACTCAGTTAACTATTCTTGCACGGGTAATG
GACACAAGTCGCAGCTCGCG

Product: peptidase M11, gametolysin

Products: NA

Alternate protein names: Outer Membrane Adhesin Like Proteiin; Calx-Beta Domain Family Protein; Hyalin Domain-Containing Protein; RHS Repeat Family; RTX Cytolytic xin Protein A; Fibronectin Type III Domain-Containing Protein; Exported Protein With Lectin-Like C-Terminus; Hemagglutinin/Hemolysin-Related Protein; Copper Amine Oxidase Domain Protein; Lipoprotein

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGATPRWLKPGQSVRVFGHANGK
QLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVAEVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLS
GDTTSPVTVDVDVSVCNTDAVALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG
HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDRIKTVTADSRVTLSPVEAEGN
FPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAAMLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPG
QSFEQQGVRIDVVASDSSSVTLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA
DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLTAATSNTAPLAVNDDFNDISA
STVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLTYVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTT
DTSTSTGGKGKNR

Sequences:

>Translated_653_residues
MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGATPRWLKPGQSVRVFGHANGK
QLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVAEVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLS
GDTTSPVTVDVDVSVCNTDAVALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG
HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDRIKTVTADSRVTLSPVEAEGN
FPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAAMLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPG
QSFEQQGVRIDVVASDSSSVTLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA
DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLTAATSNTAPLAVNDDFNDISA
STVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLTYVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTT
DTSTSTGGKGKNR
>Mature_653_residues
MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGATPRWLKPGQSVRVFGHANGK
QLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVAEVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLS
GDTTSPVTVDVDVSVCNTDAVALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG
HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDRIKTVTADSRVTLSPVEAEGN
FPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAAMLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPG
QSFEQQGVRIDVVASDSSSVTLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA
DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLTAATSNTAPLAVNDDFNDISA
STVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLTYVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTT
DTSTSTGGKGKNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69238; Mature: 69238

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGA
CCHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHCCHHHHHHEEEECCCCCEEEEEECC
TPRWLKPGQSVRVFGHANGKQLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVA
CCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEE
EVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLSGDTTSPVTVDVDVSVCNTDA
EECEEECCEEEEHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEECCCE
VALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG
EEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHC
HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDR
CCEEEEECCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCE
IKTVTADSRVTLSPVEAEGNFPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAA
EEEEECCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
MLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPGQSFEQQGVRIDVVASDSSSV
HHCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHCCCEEEEEECCCCCE
TLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA
EEEEEECCCCHHHHCCCCCEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECC
DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLT
CCCEEEEECCCEEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCHHHHHCCCCEEEE
AATSNTAPLAVNDDFNDISASTVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLT
EECCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEE
YVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTTDTSTSTGGKGKNR
ECCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGA
CCHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHCCHHHHHHEEEECCCCCEEEEEECC
TPRWLKPGQSVRVFGHANGKQLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVA
CCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEE
EVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLSGDTTSPVTVDVDVSVCNTDA
EECEEECCEEEEHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEECCCE
VALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG
EEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHC
HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDR
CCEEEEECCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCE
IKTVTADSRVTLSPVEAEGNFPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAA
EEEEECCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
MLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPGQSFEQQGVRIDVVASDSSSV
HHCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHCCCEEEEEECCCCCE
TLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA
EEEEEECCCCHHHHCCCCCEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECC
DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLT
CCCEEEEECCCEEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCHHHHHCCCCEEEE
AATSNTAPLAVNDDFNDISASTVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLT
EECCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEE
YVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTTDTSTSTGGKGKNR
ECCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA