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The map label for this gene is tlpA [H]

Identifier: 117918941

GI number: 117918941

Start: 568287

End: 568871

Strand: Reverse

Name: tlpA [H]

Synonym: Shewana3_0486

Alternate gene names: 117918941

Gene position: 568871-568287 (Counterclockwise)

Preceding gene: 117918942

Following gene: 117918940

Centisome position: 11.44

GC content: 47.86

Gene sequence:

>585_bases
ATGAAACCTTACATCGCCAAGCTCACTCTCCTTTGCGCCGCATGGCTACTGAACTGCACCGTTCAAGCTCATTCACTGCA
AAACAAACTCTATGAAACAGGTGAGCCCATCCCTAAACCCAGAGTCATGACTGGCTTTATCGAGATGCAGCATGCCCGCG
GCGTGCCTGAAGTCCCGTTTGTCGATGAAGCCGGGCAAACACACACCCTAAAGCAATACCAAGGTAAATTGACCTTAGTA
AACCTTTGGGCAACTTGGTGCACGCCCTGCTTACGGGAAATCCCAGAGCTGCAAAAACTCCAGCAGCAATATGCCAATAA
GAATATCGCCATAGTGCCCATCTCGATTGATGAAGAAGTAACAGAGGTGCGACCTTTTCTTAATCAGCATGGCTTTAGCA
ACTACCGCACTTGGCTCGATCCTGACAAAAACATCGAGCAGATTATCCCTGCTAACGTAGTGCCTGCGACCTATGCTTTT
GATGCGAAAGGTAATCTGGTCGGTTTTGTCCGTGGCTATCTCGATTGGACAGACAAAGATGTCGCGCCCTATTTAGATAA
ACTTATTGCCAAATATGCCCAGTAA

Upstream 100 bases:

>100_bases
CTGGTCGTGGGGTTGGGTTTAGGGCTAGCCCTAATAAAACGCAGGCCATAGCCCTTAAACCACAGCCCCGATTACTCAGT
TTGAATAGAAGGATAACCCC

Downstream 100 bases:

>100_bases
TTGCACTCGGCACTCATTACGAAAGGGCTAAGTTGGTTTTGACTTAGCCAATGCTTGAATCAAATCTCCGTTCGGTACCC
CACCCTAAATCTTTGCCGAA

Product: redoxin domain-containing protein

Products: NA

Alternate protein names: Cytochrome c biogenesis protein tlpA [H]

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKPYIAKLTLLCAAWLLNCTVQAHSLQNKLYETGEPIPKPRVMTGFIEMQHARGVPEVPFVDEAGQTHTLKQYQGKLTLV
NLWATWCTPCLREIPELQKLQQQYANKNIAIVPISIDEEVTEVRPFLNQHGFSNYRTWLDPDKNIEQIIPANVVPATYAF
DAKGNLVGFVRGYLDWTDKDVAPYLDKLIAKYAQ

Sequences:

>Translated_194_residues
MKPYIAKLTLLCAAWLLNCTVQAHSLQNKLYETGEPIPKPRVMTGFIEMQHARGVPEVPFVDEAGQTHTLKQYQGKLTLV
NLWATWCTPCLREIPELQKLQQQYANKNIAIVPISIDEEVTEVRPFLNQHGFSNYRTWLDPDKNIEQIIPANVVPATYAF
DAKGNLVGFVRGYLDWTDKDVAPYLDKLIAKYAQ
>Mature_194_residues
MKPYIAKLTLLCAAWLLNCTVQAHSLQNKLYETGEPIPKPRVMTGFIEMQHARGVPEVPFVDEAGQTHTLKQYQGKLTLV
NLWATWCTPCLREIPELQKLQQQYANKNIAIVPISIDEEVTEVRPFLNQHGFSNYRTWLDPDKNIEQIIPANVVPATYAF
DAKGNLVGFVRGYLDWTDKDVAPYLDKLIAKYAQ

Specific function: Involved in cytochrome aa3 assembly [H]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013740
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 22117; Mature: 22117

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPYIAKLTLLCAAWLLNCTVQAHSLQNKLYETGEPIPKPRVMTGFIEMQHARGVPEVPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
VDEAGQTHTLKQYQGKLTLVNLWATWCTPCLREIPELQKLQQQYANKNIAIVPISIDEEV
CCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHH
TEVRPFLNQHGFSNYRTWLDPDKNIEQIIPANVVPATYAFDAKGNLVGFVRGYLDWTDKD
HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCC
VAPYLDKLIAKYAQ
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKPYIAKLTLLCAAWLLNCTVQAHSLQNKLYETGEPIPKPRVMTGFIEMQHARGVPEVPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
VDEAGQTHTLKQYQGKLTLVNLWATWCTPCLREIPELQKLQQQYANKNIAIVPISIDEEV
CCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHH
TEVRPFLNQHGFSNYRTWLDPDKNIEQIIPANVVPATYAFDAKGNLVGFVRGYLDWTDKD
HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCC
VAPYLDKLIAKYAQ
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8253065; 12597275 [H]