| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918922
Identifier: 117918922
GI number: 117918922
Start: 541429
End: 543396
Strand: Reverse
Name: 117918922
Synonym: Shewana3_0467
Alternate gene names: NA
Gene position: 543396-541429 (Counterclockwise)
Preceding gene: 117918923
Following gene: 117918921
Centisome position: 10.93
GC content: 51.27
Gene sequence:
>1968_bases ATGAAGCCAATCTATCGACTCACGGTTCCCATTCTCTTAGGTCTCACGCTCGGCGCCTGTGGCGGCAGTGATGATGACGA TGAAGATCCTAGCCCCATTGAATCCCAGCAATTTGCCATTAAAGGGACAGTAAAAGGGCTGACCAACACCCTAAAACTCA CCCTACAAACCAATGGCCAGACAGTAGAAACGCTTTCTGTTCAAAGTGATGGCACAGATAAGGCCTTTGCATTTTCGAAT ATGCAGAATGAAGGCGTTAGCTTTGCCATTACCGTCAATACGCAGCCAACGGCACAAACCTGTACCGTCGCTAATGGCAG CGGCACCTTAAGCCAGAGCAATGCCGAAACCGCCCTCGTCACCTGTGAAACCAATGCTAATGCCGAATTAACCGGGATCT TTAGGGATAGCCCAGTTGCCGGGATCCATTATCAAACCGACAGCCAAACCGATGGCACCACCAGCGATATTGGTGAGTTT CAATACTTACAGGGGGAACAAGTCACCTTTTCGGTCGGCGCGATTCAGTTTCCCAGCACAGCTGCCAGCGCACTCGTCAC TCCCACCGAAATTGCAGCGGGCAATGAGGTCACAAAGGTAAATATCCTGCAATTGCTGCAGACTTTAGATCAGGACTGCG ATGTCGAAAATGGCATTCAGATCAAAAGCTCACACCATGATCTGCTCGCCAATACCGTACTGGATATCAGCAGTGCCGAT TTTGACTCCCAACTCAACACCGCCTTTGCCAGCCTCGGTTCGGGTTTGAGTCTGATCAGCGAAGCCCAAGCCCTTAACCA TTTCGATACCTCCAATCGTAATCTGCTGCTAGGTAGCTGGCTGCTGTCGGAAGGAGAAGGTCAAAGCAACATACTGACCT TTATCGACCATAGCCGTTATATATTGATCCACGAGCATGCGGGTGATGGCGATCAGGGTGCAGCCTCGGTCGAATACGGA AATTACACTTGGGATAGCGTGACGGGTAGTTTCAGCGTGAGTCTCATCGCTCAATCCGATGGTTCCGGTGGCCTGTACGA TGAAAGTAGTGTCGTTAACAAGGCGATGGTAAGCCTCAATACCCTCACACTGAGCCTCACAGACAATGGTTCGTCAAGCA TCACACTCACGCGTATCGAAGATGCTAGCGATGCGTTAATCGGCACCTGGCATGTGTACGATCCCGAAACCGATAACGAC AGCTTTGTGACTTTCCTGCCCAATCAAGCCTATGCCATTGTGCATACCGCCAATTCCGACAGCTATGAGGGGCAATCACC CCAAGCGCAATCGGGGGAATTTGGTCATTACGTCAAAGATGCCAGTGGCTATAAGTTTACCGCCAGTGTCGAGTCCGACG GCCCTAATGGCCTCTATGATGCCCAGTCAGCCGACGCCCATCAGTTTTCGTCCATCAGCACCAGCCAATGGGGCGAGATG ATGGCCACAGAAAATGGCCCAGACGGCGGTACTTTCACCTTAGATAAGGTCGGCAGTTTTGTGACAGAGTTAGTCGATAA GCCTTCCGCCGCAGGTACCAGCCTTGGACGCATCACCTCGGTGCGGGATATCGAAGGCTTTAGCTACGACGCCACAGTCA ATCGCCTGCTGCAATTTGACGTAACCTTTGCCACGGACACGCAAAACCGCTGCACCACAGAGTTCGCCAATGGCCAATGC GGCGCGCGTTACAACATGCTGGTGCAGAATGTATCCGAGAATGATATGGGGGATGTGATTGGCGAAATCAGCCTGAACGA AGTCACTAGCAATGCCCAAGTAAACAGCGATTTTTATATGACGACCGCTGGCACACTGCACTTTGCCTTTAGTGGCAGTC AGACGATGACCATCAGTCCTTTGTTAGGCAAATCTTGCCAAGGTAATCAACGCGCTTTAGTGAGCTTAACCGATACCAGC AGTAACCAATCGCTTTGGTTAGTCGAGTTAACCCCAGCCGCCCTATAG
Upstream 100 bases:
>100_bases GCTATCGCCCGAGCCCCAATGATGACTAACGACCATCCCGCTATGTGGGATAGCGAGTTGTTGCTGATATTTGCTCAGTA GCCTAAAAGGAATTTACATA
Downstream 100 bases:
>100_bases CTAACGCTATCTTCCCTTTGCCGGGCTATGTTCTTCCGTAGTCCGGCATTTTTTTATTCTAAAAAACCAATAAGTCCAGC GAACACAGCTATTGCCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQTVETLSVQSDGTDKAFAFSN MQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALVTCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEF QYLQGEQVTFSVGAIQFPSTAASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRYILIHEHAGDGDQGAASVEYG NYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLNTLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDND SFVTFLPNQAYAIVHTANSDSYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFDVTFATDTQNRCTTEFANGQC GARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYMTTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTS SNQSLWLVELTPAAL
Sequences:
>Translated_655_residues MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQTVETLSVQSDGTDKAFAFSN MQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALVTCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEF QYLQGEQVTFSVGAIQFPSTAASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRYILIHEHAGDGDQGAASVEYG NYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLNTLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDND SFVTFLPNQAYAIVHTANSDSYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFDVTFATDTQNRCTTEFANGQC GARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYMTTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTS SNQSLWLVELTPAAL >Mature_655_residues MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQTVETLSVQSDGTDKAFAFSN MQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALVTCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEF QYLQGEQVTFSVGAIQFPSTAASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRYILIHEHAGDGDQGAASVEYG NYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLNTLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDND SFVTFLPNQAYAIVHTANSDSYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFDVTFATDTQNRCTTEFANGQC GARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYMTTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTS SNQSLWLVELTPAAL
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69540; Mature: 69540
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQ CCCHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCEEEEEEEECCCC TVETLSVQSDGTDKAFAFSNMQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALV EEEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEE TCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEFQYLQGEQVTFSVGAIQFPST EEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCC AASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD HHHHEECCHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHEECCCCC FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRY CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCEE ILIHEHAGDGDQGAASVEYGNYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLN EEEEECCCCCCCCCEEEECCCEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHEEEE TLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDNDSFVTFLPNQAYAIVHTANSD EEEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCC SYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM CCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHH MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFD EECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEHHHHHEEEEEE VTFATDTQNRCTTEFANGQCGARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYM EEEEECCCCCCEEECCCCCCCCEEEEHEECCCCCCHHHHHCCEEHHHCCCCCEECCCEEE TTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTSSNQSLWLVELTPAAL EECCEEEEEECCCCEEEECHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCC >Mature Secondary Structure MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQ CCCHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCEEEEEEEECCCC TVETLSVQSDGTDKAFAFSNMQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALV EEEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEE TCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEFQYLQGEQVTFSVGAIQFPST EEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCC AASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD HHHHEECCHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHEECCCCC FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRY CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCEE ILIHEHAGDGDQGAASVEYGNYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLN EEEEECCCCCCCCCEEEECCCEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHEEEE TLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDNDSFVTFLPNQAYAIVHTANSD EEEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCC SYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM CCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHH MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFD EECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEHHHHHEEEEEE VTFATDTQNRCTTEFANGQCGARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYM EEEEECCCCCCEEECCCCCCCCEEEEHEECCCCCCHHHHHCCEEHHHCCCCCEECCCEEE TTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTSSNQSLWLVELTPAAL EECCEEEEEECCCCEEEECHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA