Click here to switch to the map view.

The map label for this gene is 117918823

Identifier: 117918823

GI number: 117918823

Start: 403281

End: 403808

Strand: Reverse

Name: 117918823

Synonym: Shewana3_0366

Alternate gene names: NA

Gene position: 403808-403281 (Counterclockwise)

Preceding gene: 117918825

Following gene: 117918822

Centisome position: 8.12

GC content: 46.59

Gene sequence:

>528_bases
ATGAATATCTATTACCGCGAAGCCAAACTCTGCGGCCGCAAAACTGGCAATGGCACTAAGCTGCCATTTTTGATGAATAT
GCTGTACTCACTCGCTGAAAAGAATGGCGATTTACAACCTTTTGCCATGGAGGATATTCAGGCCGTCCTGTTTAACCAGC
ATCATTCCATTGGCTGCTCCATCAAAGCGCCTTTGCCCATAGTCTCTTGGCGTAACGAAGCCATTTGGTACGAGCTATTC
AAAGGTGAGCAGCCCGTATATCTACCCCAATGCATTACTTTTACCAATGGCGCCGTCGACTTTGCGATTGTCGTGATTGG
CGATGAATATGAGCTACGTATTTGGCCTGACGCCAATAATCGTGAGCGTGAAAAACACCAATGGTTCTCACACCATGCCG
CCGTCTACTCGGAAGAAACCGAAATCTTTAAGGAATGTCTTGAAACGCTACTTAAACATATCCGCAAGGAAGATGATTTT
GAGGCCAAACACCCCAAATTTGGCAAAAAGCCCCGAGCAGCGACCTAA

Upstream 100 bases:

>100_bases
CTTGAGTTAACATAAGCCATTTCCTCACTAAGGGCTATCGCTTTACCTTGAGACGAACAACGCGCTCATCCAAGGTTAGC
CCGTCATTAAGGATTGATGA

Downstream 100 bases:

>100_bases
AATTTAGCTCGTATCAGGGCGATTGCCATAATTTTGCCACTATTGATCAGCAACTTGCCCGCAACTCCCGTGGGCAAATC
TGCTTTAATACCCGCCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MNIYYREAKLCGRKTGNGTKLPFLMNMLYSLAEKNGDLQPFAMEDIQAVLFNQHHSIGCSIKAPLPIVSWRNEAIWYELF
KGEQPVYLPQCITFTNGAVDFAIVVIGDEYELRIWPDANNREREKHQWFSHHAAVYSEETEIFKECLETLLKHIRKEDDF
EAKHPKFGKKPRAAT

Sequences:

>Translated_175_residues
MNIYYREAKLCGRKTGNGTKLPFLMNMLYSLAEKNGDLQPFAMEDIQAVLFNQHHSIGCSIKAPLPIVSWRNEAIWYELF
KGEQPVYLPQCITFTNGAVDFAIVVIGDEYELRIWPDANNREREKHQWFSHHAAVYSEETEIFKECLETLLKHIRKEDDF
EAKHPKFGKKPRAAT
>Mature_175_residues
MNIYYREAKLCGRKTGNGTKLPFLMNMLYSLAEKNGDLQPFAMEDIQAVLFNQHHSIGCSIKAPLPIVSWRNEAIWYELF
KGEQPVYLPQCITFTNGAVDFAIVVIGDEYELRIWPDANNREREKHQWFSHHAAVYSEETEIFKECLETLLKHIRKEDDF
EAKHPKFGKKPRAAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20364; Mature: 20364

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYYREAKLCGRKTGNGTKLPFLMNMLYSLAEKNGDLQPFAMEDIQAVLFNQHHSIGCS
CCEEECHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEE
IKAPLPIVSWRNEAIWYELFKGEQPVYLPQCITFTNGAVDFAIVVIGDEYELRIWPDANN
EECCCCEEECCCCCEEEHHHCCCCCEECCCEEEECCCCEEEEEEEECCCEEEEECCCCCC
REREKHQWFSHHAAVYSEETEIFKECLETLLKHIRKEDDFEAKHPKFGKKPRAAT
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNIYYREAKLCGRKTGNGTKLPFLMNMLYSLAEKNGDLQPFAMEDIQAVLFNQHHSIGCS
CCEEECHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEE
IKAPLPIVSWRNEAIWYELFKGEQPVYLPQCITFTNGAVDFAIVVIGDEYELRIWPDANN
EECCCCEEECCCCCEEEHHHCCCCCEECCCEEEECCCCEEEEEEEECCCEEEEECCCCCC
REREKHQWFSHHAAVYSEETEIFKECLETLLKHIRKEDDFEAKHPKFGKKPRAAT
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA