| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918767
Identifier: 117918767
GI number: 117918767
Start: 348971
End: 349192
Strand: Reverse
Name: 117918767
Synonym: Shewana3_0310
Alternate gene names: NA
Gene position: 349192-348971 (Counterclockwise)
Preceding gene: 117918774
Following gene: 117918766
Centisome position: 7.02
GC content: 50.45
Gene sequence:
>222_bases ATGTCACAACAAGGATCTGCGGGCAATGTTATCGCCGCTATCGCTAGTCTGTTCTTTCCCGGCCTAGGTCAACTAGTTCA GGGACGAATTTTGGCTGCATTGCTGTTTTTCGTGGTCACTGTGGTTGGCTATGCCCTCTGGTGGTTAGTGGTCCCTGCTG TAATAGGTGCTATCTTTCACCTCTGGAGCATTATCGATGCGGCGCGTTTTAAGGCCGACTAA
Upstream 100 bases:
>100_bases GTTCTATCTTCTTAGTCACGGGTTTCTCTTGATTCTGTTGGTATTGACTCGTTATCTTCGTACAATAAACACTTAATTTA CAAGTCTAAGGAGTGAATTG
Downstream 100 bases:
>100_bases CTTCATTTGACTCAGTGACGGAATACCCAATGAAAAGATTGATCACCTCAAGCCTGATGGCGGCAACGCTATTGCTGACG GGCTGCCAGAGTGCCTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MSQQGSAGNVIAAIASLFFPGLGQLVQGRILAALLFFVVTVVGYALWWLVVPAVIGAIFHLWSIIDAARFKAD
Sequences:
>Translated_73_residues MSQQGSAGNVIAAIASLFFPGLGQLVQGRILAALLFFVVTVVGYALWWLVVPAVIGAIFHLWSIIDAARFKAD >Mature_72_residues SQQGSAGNVIAAIASLFFPGLGQLVQGRILAALLFFVVTVVGYALWWLVVPAVIGAIFHLWSIIDAARFKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7787; Mature: 7656
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQGSAGNVIAAIASLFFPGLGQLVQGRILAALLFFVVTVVGYALWWLVVPAVIGAIFH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWSIIDAARFKAD HHHHHHHHHHCCC >Mature Secondary Structure SQQGSAGNVIAAIASLFFPGLGQLVQGRILAALLFFVVTVVGYALWWLVVPAVIGAIFH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWSIIDAARFKAD HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA