| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is gsp [C]
Identifier: 117918747
GI number: 117918747
Start: 322495
End: 323184
Strand: Reverse
Name: gsp [C]
Synonym: Shewana3_0290
Alternate gene names: 117918747
Gene position: 323184-322495 (Counterclockwise)
Preceding gene: 117918748
Following gene: 117918746
Centisome position: 6.5
GC content: 48.7
Gene sequence:
>690_bases ATGGTCAAAGGTTTTCGTTTATTGCTACTCACAGTAAGCCTAGTCTGCGGTCTTGGTTATCTCGGCTACCACGGGCTGAC TCGTTATAACTTAAATACGGACTATCAAGTGAGTGATGTGCTCGACTCACTCAATGGCGTCGAGATTTATTATAACGGCG GCGTCAACACTAACGAGGGGCGCAACCTCTCCCTCGACGGCTATAATCTGGGTATCAAATACCAATGCGTAGAGTTCGTT AAACGTTACTTTTACCTGCGTTATCAGCACAAAATGCCCGACAGTTTCGGTCACGCCAAAGACTTCTTCAATGACCTTTT GCCCGATGCGAGCTGGAATGAAAAACGCGCCCTACGGCAATATACCAATGGCAGCCAAAGCAAGCCGATGGCTGATGATT TACTGGTATTCGCGCCATGGGTGTTTAATCCCTACGGCCATGTCGCCATTATCGCCAACGTCACAGAAACCAGTATCGAA ATTGCCCAGCAAAATCCCGGCCCTTTTGCACCGTCACGGGAGGTTTTTCCCTTAGTGCAACGTGAAGGCCTGTGGTATAT CGATGCCCCTCGCACTAAGGGCTGGTTACGCTGGGAAGCTCCAGCTGTCACGATGATGAAGGGAAGTGCTGAGGATAATG TGGAGCCAAATATCCAAGTTAACCAACAAGCTATTCTCCTTAAACTGTGA
Upstream 100 bases:
>100_bases CAAACCGCCAGTACGCCTAGACGTTTTTAGCGACAACAGCATACAATCCGACCTTGTATCCTGCTGAATCAATTTATCTT TTGAGAATGTCGTACTAAAG
Downstream 100 bases:
>100_bases ATGTCGTAGAGGTAAAAATGAGACTACTCGACTGGCTAAAACGACACCTTGGCCCTAAGGCAAATACGGACTCACAGACT ACGGATCTTCAAGCAATTTT
Product: CHAP domain-containing protein
Products: ADP; Glutathionylspermidine; H+; Phosphate [C]
Alternate protein names: Trypanothione Synthetase Domain Protein; Amidase; Chap Domain Containing Protein; Trypanothione Synthetase Domain-Containing Protein
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MVKGFRLLLLTVSLVCGLGYLGYHGLTRYNLNTDYQVSDVLDSLNGVEIYYNGGVNTNEGRNLSLDGYNLGIKYQCVEFV KRYFYLRYQHKMPDSFGHAKDFFNDLLPDASWNEKRALRQYTNGSQSKPMADDLLVFAPWVFNPYGHVAIIANVTETSIE IAQQNPGPFAPSREVFPLVQREGLWYIDAPRTKGWLRWEAPAVTMMKGSAEDNVEPNIQVNQQAILLKL
Sequences:
>Translated_229_residues MVKGFRLLLLTVSLVCGLGYLGYHGLTRYNLNTDYQVSDVLDSLNGVEIYYNGGVNTNEGRNLSLDGYNLGIKYQCVEFV KRYFYLRYQHKMPDSFGHAKDFFNDLLPDASWNEKRALRQYTNGSQSKPMADDLLVFAPWVFNPYGHVAIIANVTETSIE IAQQNPGPFAPSREVFPLVQREGLWYIDAPRTKGWLRWEAPAVTMMKGSAEDNVEPNIQVNQQAILLKL >Mature_229_residues MVKGFRLLLLTVSLVCGLGYLGYHGLTRYNLNTDYQVSDVLDSLNGVEIYYNGGVNTNEGRNLSLDGYNLGIKYQCVEFV KRYFYLRYQHKMPDSFGHAKDFFNDLLPDASWNEKRALRQYTNGSQSKPMADDLLVFAPWVFNPYGHVAIIANVTETSIE IAQQNPGPFAPSREVFPLVQREGLWYIDAPRTKGWLRWEAPAVTMMKGSAEDNVEPNIQVNQQAILLKL
Specific function: Catalyzes The Formation Of An Amide Bond Between Glutathione And Spermidine Coupled With Hydrolysis Of ATP; Also Catalyzes The Hydrolysis Of Glutathionylspermidine To Glutathione And Spermidine. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.1.8; 3.5.1.78 [C]
Molecular weight: Translated: 26067; Mature: 26067
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKGFRLLLLTVSLVCGLGYLGYHGLTRYNLNTDYQVSDVLDSLNGVEIYYNGGVNTNEG CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCC RNLSLDGYNLGIKYQCVEFVKRYFYLRYQHKMPDSFGHAKDFFNDLLPDASWNEKRALRQ CEEEECCEECCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH YTNGSQSKPMADDLLVFAPWVFNPYGHVAIIANVTETSIEIAQQNPGPFAPSREVFPLVQ HCCCCCCCCCCCCEEEECCHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHH REGLWYIDAPRTKGWLRWEAPAVTMMKGSAEDNVEPNIQVNQQAILLKL HCCEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCEEECCEEEEEEC >Mature Secondary Structure MVKGFRLLLLTVSLVCGLGYLGYHGLTRYNLNTDYQVSDVLDSLNGVEIYYNGGVNTNEG CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCC RNLSLDGYNLGIKYQCVEFVKRYFYLRYQHKMPDSFGHAKDFFNDLLPDASWNEKRALRQ CEEEECCEECCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH YTNGSQSKPMADDLLVFAPWVFNPYGHVAIIANVTETSIEIAQQNPGPFAPSREVFPLVQ HCCCCCCCCCCCCEEEECCHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHH REGLWYIDAPRTKGWLRWEAPAVTMMKGSAEDNVEPNIQVNQQAILLKL HCCEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; Reduced glutathione; Spermidine [C]
Specific reaction: ATP + Reduced glutathione + Spermidine --> ADP + Glutathionylspermidine + H+ + Phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA