| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918572
Identifier: 117918572
GI number: 117918572
Start: 130227
End: 131216
Strand: Reverse
Name: 117918572
Synonym: Shewana3_0114
Alternate gene names: NA
Gene position: 131216-130227 (Counterclockwise)
Preceding gene: 117918573
Following gene: 117918570
Centisome position: 2.64
GC content: 47.17
Gene sequence:
>990_bases ATGCCCAATAGATATTCATCTCTCGCTCTTACACTCTGGCTCTGTGGTGTTAGTCACCATGCCATTGCCGATACGGTGTT TCTCACCAATGGCGATAAAATTACCGGTGAGATTAAAGCCCTAGATGAGCAAAATCTGGTAATCAAACCCAGCTACGCCC CCAAAATCACTATCGAACGCAGCGCGGTTCGCAGCTTTGAAACCCGTGAGCCACAGCCCTGGAGCATCAATCGCTCAATC AAAGAGGTAACGGTTCAAGCTTCTGAATTAGATAGCTTTGTGCTGATAGACGATCAGCAAACCCCAATCAGCGAGTTAAT CTATTCGGAACTCCTGAGTGACTCGGATTGGCACTACAGCGGCAGTGTAGAGGCCGCCATCGATGTCACCCATAACAGTA AAAACACTCAAAAGCTGCATGCTAAGGGCGATGTGACCGCCGAAACCTTAAACTGGCGTCATAACCTCAAGAGTGAAGTC CGCTACGAGACCGAAGACAAAACCACTAAGCGTAATACCCTCGAAGCCCATTACAGCCTCGACTATTTGATCAGTGACCA TTGGTTTTTGCGGCAAGAGGATTATTATCAGGAGGATAAGCTCAACCTCGATATCCGCAGCTACTACGCCGCATTGGGTC CGGGTTATCGTTTTTGGGGTGTCAACCGCGACAAACTCGACTTTGTACTCACCTACAACCACTTCTGGCTAGATTATCAA GTGTTTACCTATGAGCTAAATGCTTGGGCGGCAACCGTCAACTACAAGCAATATTGGTTCGACGGCGTGTTAGAGACCTA TGCGGATTTGCAAATTGCCTTCCCCGATATTCCTACCATCGAATATATTTCTGACTCGACGTTTGGGCTTAAGTACCTGC TGACACAACAGATTTACCTCTCATTCAAATACGATATCAATGAGACTAAATCCGCTGTGCAGCATTCGCGGGATATTTCC TACAGCCTAGGCTTAGGGGTTAACTTCTAA
Upstream 100 bases:
>100_bases GAGTTAGCTTTCAATTCCTTACAAACTCAAACGGCTGTTATCAGGCGAATAAGCTACAATTGCCAGCATGCCATCATTCC CCATATGAGCCAGATGCAAG
Downstream 100 bases:
>100_bases ATTTACTGGGGTTTTACCACGCAGGTCATTTCTGGCGCTTCGTATCCCCAGACAATTTTGGCTTCGCCATGGTGTTCCCA CAGACTCTCATTTCGGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MPNRYSSLALTLWLCGVSHHAIADTVFLTNGDKITGEIKALDEQNLVIKPSYAPKITIERSAVRSFETREPQPWSINRSI KEVTVQASELDSFVLIDDQQTPISELIYSELLSDSDWHYSGSVEAAIDVTHNSKNTQKLHAKGDVTAETLNWRHNLKSEV RYETEDKTTKRNTLEAHYSLDYLISDHWFLRQEDYYQEDKLNLDIRSYYAALGPGYRFWGVNRDKLDFVLTYNHFWLDYQ VFTYELNAWAATVNYKQYWFDGVLETYADLQIAFPDIPTIEYISDSTFGLKYLLTQQIYLSFKYDINETKSAVQHSRDIS YSLGLGVNF
Sequences:
>Translated_329_residues MPNRYSSLALTLWLCGVSHHAIADTVFLTNGDKITGEIKALDEQNLVIKPSYAPKITIERSAVRSFETREPQPWSINRSI KEVTVQASELDSFVLIDDQQTPISELIYSELLSDSDWHYSGSVEAAIDVTHNSKNTQKLHAKGDVTAETLNWRHNLKSEV RYETEDKTTKRNTLEAHYSLDYLISDHWFLRQEDYYQEDKLNLDIRSYYAALGPGYRFWGVNRDKLDFVLTYNHFWLDYQ VFTYELNAWAATVNYKQYWFDGVLETYADLQIAFPDIPTIEYISDSTFGLKYLLTQQIYLSFKYDINETKSAVQHSRDIS YSLGLGVNF >Mature_328_residues PNRYSSLALTLWLCGVSHHAIADTVFLTNGDKITGEIKALDEQNLVIKPSYAPKITIERSAVRSFETREPQPWSINRSIK EVTVQASELDSFVLIDDQQTPISELIYSELLSDSDWHYSGSVEAAIDVTHNSKNTQKLHAKGDVTAETLNWRHNLKSEVR YETEDKTTKRNTLEAHYSLDYLISDHWFLRQEDYYQEDKLNLDIRSYYAALGPGYRFWGVNRDKLDFVLTYNHFWLDYQV FTYELNAWAATVNYKQYWFDGVLETYADLQIAFPDIPTIEYISDSTFGLKYLLTQQIYLSFKYDINETKSAVQHSRDISY SLGLGVNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38237; Mature: 38106
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRYSSLALTLWLCGVSHHAIADTVFLTNGDKITGEIKALDEQNLVIKPSYAPKITIER CCCCHHHHEEEEEECCCCCCHHEEEEEEECCCEEEEEEEEECCCCCEECCCCCCEEEEEH SAVRSFETREPQPWSINRSIKEVTVQASELDSFVLIDDQQTPISELIYSELLSDSDWHYS HHHHHHHCCCCCCCCCCCCHHHEEEEHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCEEC GSVEAAIDVTHNSKNTQKLHAKGDVTAETLNWRHNLKSEVRYETEDKTTKRNTLEAHYSL CCEEEEEEEEECCCCCEEEECCCCCEEEECCHHHCCCHHCEECCCCCCCCCCEEEEEEEE DYLISDHWFLRQEDYYQEDKLNLDIRSYYAALGPGYRFWGVNRDKLDFVLTYNHFWLDYQ EEEECCCEEECCCCCCCCCCCCEEHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEEEEEE VFTYELNAWAATVNYKQYWFDGVLETYADLQIAFPDIPTIEYISDSTFGLKYLLTQQIYL EEEEEEEEEEEEECHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCCHHHHEEEEEEE SFKYDINETKSAVQHSRDISYSLGLGVNF EEEECCCHHHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure PNRYSSLALTLWLCGVSHHAIADTVFLTNGDKITGEIKALDEQNLVIKPSYAPKITIER CCCHHHHEEEEEECCCCCCHHEEEEEEECCCEEEEEEEEECCCCCEECCCCCCEEEEEH SAVRSFETREPQPWSINRSIKEVTVQASELDSFVLIDDQQTPISELIYSELLSDSDWHYS HHHHHHHCCCCCCCCCCCCHHHEEEEHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCEEC GSVEAAIDVTHNSKNTQKLHAKGDVTAETLNWRHNLKSEVRYETEDKTTKRNTLEAHYSL CCEEEEEEEEECCCCCEEEECCCCCEEEECCHHHCCCHHCEECCCCCCCCCCEEEEEEEE DYLISDHWFLRQEDYYQEDKLNLDIRSYYAALGPGYRFWGVNRDKLDFVLTYNHFWLDYQ EEEECCCEEECCCCCCCCCCCCEEHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEEEEEE VFTYELNAWAATVNYKQYWFDGVLETYADLQIAFPDIPTIEYISDSTFGLKYLLTQQIYL EEEEEEEEEEEEECHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCCHHHHEEEEEEE SFKYDINETKSAVQHSRDISYSLGLGVNF EEEECCCHHHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA