| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676318
Identifier: 117676318
GI number: 117676318
Start: 267647
End: 267979
Strand: Reverse
Name: 117676318
Synonym: Shewana3_4381
Alternate gene names: NA
Gene position: 267979-267647 (Counterclockwise)
Preceding gene: 117676319
Following gene: 117676317
Centisome position: 96.07
GC content: 41.14
Gene sequence:
>333_bases ATGAAAAAATTATTGTCAGTATTCACCCTATGCACAGCGTTAATGAGTGGCAATGTATTGGCCCATGCGGATCACGGAGT GATCAGCGGTCAAGGTGCCTTAAAGGTGGCAGCTAAATCGCTTAATCAAATGACATTTAAAGACTTTAGTTTTGAGGTGG GTAAATTAGAGGGAACATGGAAAAACTTGCCTGAGGCACAATTATCAATCGTCAGCTTTGAAGGCAATTACTACGTGGTC AGTGCCGTTAACCCAACGACTCAAAAACAATTTTTTCTCAAAATAGCCAGTAACGGCGAGCTTTTAGAAGTCAAAGACAC GAACAAGTTCTAG
Upstream 100 bases:
>100_bases GAAAAACAAGACAGATAAGCCTATTGCCGTTCAGTTACAGGTAAAAGGACAATATGAAGTCATTGGTTTAAAACAATAAT TGGCAAATTTGGAGAAAACG
Downstream 100 bases:
>100_bases TCGCCAAGATTGCACTGTCTATGTTATGGGCAACAGACAGTGCAATAACCCTGCAAGCGGTTTACTTTTATTAAATCAAA TATCGTTCTTAGCAATACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKKLLSVFTLCTALMSGNVLAHADHGVISGQGALKVAAKSLNQMTFKDFSFEVGKLEGTWKNLPEAQLSIVSFEGNYYVV SAVNPTTQKQFFLKIASNGELLEVKDTNKF
Sequences:
>Translated_110_residues MKKLLSVFTLCTALMSGNVLAHADHGVISGQGALKVAAKSLNQMTFKDFSFEVGKLEGTWKNLPEAQLSIVSFEGNYYVV SAVNPTTQKQFFLKIASNGELLEVKDTNKF >Mature_110_residues MKKLLSVFTLCTALMSGNVLAHADHGVISGQGALKVAAKSLNQMTFKDFSFEVGKLEGTWKNLPEAQLSIVSFEGNYYVV SAVNPTTQKQFFLKIASNGELLEVKDTNKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12032; Mature: 12032
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSVFTLCTALMSGNVLAHADHGVISGQGALKVAAKSLNQMTFKDFSFEVGKLEGTW CHHHHHHHHHHHHHHCCCEEEECCCCEEECCCHHHHHHHHHHCCEECCCCEEEECCCCCC KNLPEAQLSIVSFEGNYYVVSAVNPTTQKQFFLKIASNGELLEVKDTNKF CCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCC >Mature Secondary Structure MKKLLSVFTLCTALMSGNVLAHADHGVISGQGALKVAAKSLNQMTFKDFSFEVGKLEGTW CHHHHHHHHHHHHHHCCCEEEECCCCEEECCCHHHHHHHHHHCCEECCCCEEEECCCCCC KNLPEAQLSIVSFEGNYYVVSAVNPTTQKQFFLKIASNGELLEVKDTNKF CCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA