| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676290
Identifier: 117676290
GI number: 117676290
Start: 238479
End: 238871
Strand: Reverse
Name: 117676290
Synonym: Shewana3_4353
Alternate gene names: NA
Gene position: 238871-238479 (Counterclockwise)
Preceding gene: 117676291
Following gene: 117676289
Centisome position: 85.63
GC content: 40.2
Gene sequence:
>393_bases ATGTCACGTGATAGAAGTGAAGCTTTTGGAGCATTAATTGGTTCTCAGTCCGCTGACGCTAATGAATTTTGGCTAGAACA CTGTACTACCCCTCAGAAAGAAGATTCTGCCACCAGAGTTAACTTTAATATGCGTGCTCCTCATCACCAGAAATCAGTTA ATTCTTATTACGAAAGTTCGCATGGCAAACTAGGCTACTTGGGTACATGGCACACACATCCTGAACCAACACCCACCCCA TCGTATATAGATATTGCAGATTGGAAGAAATGCATAAAACGTAACCCTGACAGAGAATTAGTCTTTGTAATTGTTGGTCA GAAAGACGTCTGTATCTTTCGGGAAATTAACGGGTCATTTAAACGAATTTTTAAGGAACAAATCGATGACTGA
Upstream 100 bases:
>100_bases GACTGTGATGTCTGCACTCATTGAGCAAGATACGGGCATCAAAGATACGAAAATTTACCTTTCCGAAGAACTAATTGACG TTTGGTATTCTTACAGGCAG
Downstream 100 bases:
>100_bases CGAGAGGCTACATTTTCATCAAGCATGTTTTTATCCCATAGAGTCAATTGACAAGCTCGCAGAGTTTCTATTGGGCATTA AGACTTTTTTTGTGTGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSRDRSEAFGALIGSQSADANEFWLEHCTTPQKEDSATRVNFNMRAPHHQKSVNSYYESSHGKLGYLGTWHTHPEPTPTP SYIDIADWKKCIKRNPDRELVFVIVGQKDVCIFREINGSFKRIFKEQIDD
Sequences:
>Translated_130_residues MSRDRSEAFGALIGSQSADANEFWLEHCTTPQKEDSATRVNFNMRAPHHQKSVNSYYESSHGKLGYLGTWHTHPEPTPTP SYIDIADWKKCIKRNPDRELVFVIVGQKDVCIFREINGSFKRIFKEQIDD >Mature_129_residues SRDRSEAFGALIGSQSADANEFWLEHCTTPQKEDSATRVNFNMRAPHHQKSVNSYYESSHGKLGYLGTWHTHPEPTPTPS YIDIADWKKCIKRNPDRELVFVIVGQKDVCIFREINGSFKRIFKEQIDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15002; Mature: 14871
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDRSEAFGALIGSQSADANEFWLEHCTTPQKEDSATRVNFNMRAPHHQKSVNSYYESS CCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCC HGKLGYLGTWHTHPEPTPTPSYIDIADWKKCIKRNPDRELVFVIVGQKDVCIFREINGSF CCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCHHH KRIFKEQIDD HHHHHHHCCC >Mature Secondary Structure SRDRSEAFGALIGSQSADANEFWLEHCTTPQKEDSATRVNFNMRAPHHQKSVNSYYESS CCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCC HGKLGYLGTWHTHPEPTPTPSYIDIADWKKCIKRNPDRELVFVIVGQKDVCIFREINGSF CCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCHHH KRIFKEQIDD HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA